Merge pull request #326 from carpentries/callout-margins

[rnaseq-cwl-training.git] / bin / lesson_check.py

diff --git a/bin/lesson_check.py b/bin/lesson_check.py
index 93a10d9b2e958560ef70a734622e93cdc2eb849e..b728dcb928e7c8e654c32d74fa0c8017859fadd9 100755 (executable)
--- a/bin/lesson_check.py
+++ b/bin/lesson_check.py
@@ -18,6 +18,9 @@ __version__ = '0.3'
 # Where to look for source Markdown files.
 SOURCE_DIRS = ['', '_episodes', '_extras']
 
+# Where to look for source Rmd files.
+SOURCE_RMD_DIRS = ['_episodes_rmd']
+
 # Required files: each entry is ('path': YAML_required).
 # FIXME: We do not yet validate whether any files have the required
 #   YAML headers, but should in the future.
@@ -108,6 +111,7 @@ def main():
     args = parse_args()
     args.reporter = Reporter()
     check_config(args.reporter, args.source_dir)
+    check_source_rmd(args.reporter, args.source_dir, args.parser)
     args.references = read_references(args.reporter, args.reference_path)
 
     docs = read_all_markdown(args.source_dir, args.parser)
@@ -171,7 +175,7 @@ def check_config(reporter, source_dir):
     reporter.check_field(config_file, 'configuration',
                          config, 'kind', 'lesson')
     reporter.check_field(config_file, 'configuration',
-                         config, 'carpentry', ('swc', 'dc', 'lc'))
+                         config, 'carpentry', ('swc', 'dc', 'lc', 'cp'))
     reporter.check_field(config_file, 'configuration', config, 'title')
     reporter.check_field(config_file, 'configuration', config, 'email')
 
@@ -184,6 +188,19 @@ def check_config(reporter, source_dir):
                    'configuration',
                    '"root" not set to "." in configuration')
 
+def check_source_rmd(reporter, source_dir, parser):
+    """Check that Rmd episode files include `source: Rmd`"""
+
+    episode_rmd_dir = [os.path.join(source_dir, d) for d in SOURCE_RMD_DIRS]
+    episode_rmd_files = [os.path.join(d, '*.Rmd') for d in episode_rmd_dir]
+    results = {}
+    for pat in episode_rmd_files:
+        for f in glob.glob(pat):
+            data = read_markdown(parser, f)
+            dy = data['metadata']
+            if dy:
+                reporter.check_field(f, 'episode_rmd',
+                                     dy, 'source', 'Rmd')
 
 def read_references(reporter, ref_path):
     """Read shared file of reference links, returning dictionary of valid references