--- layout: lesson root: . # Is the only page that doesn't follow the pattern /:path/index.html permalink: index.html # Is the only page that doesn't follow the pattern /:path/index.html --- This training will walk you through the development of a best-practices Common Workflow Language (CWL) workflow. At the conclusion of this training, you should have a grasp of the essential components of a workflow, and have a basis for learning more. > ## Prerequisites > > This training assumes some basic familiarity with editing text files, > the Unix command line, and Unix shell scripts. > > Specific knowledge of the biology of RNA-seq is *not* a prerequisite > for these lessons. Although orignally developed to solve big data > problems in genomics, CWL is not domain specific to bioinformatics, > and is used in a number of other fields including medical imaging, > astronomy, geospatial imaging, and machine learning. We hope that > you will find this training useful regardless of your area of > research. > {: .prereq} These lessons are based on [Introduction to RNA-seq using high-performance computing (HPC)](https://github.com/hbctraining/Intro-to-rnaseq-hpc-O2) lessons developed by members of the teaching team at the Harvard Chan Bioinformatics Core (HBC). The original training, which includes additional lectures about the biology of RNA-seq, can be found at that link. {% include links.md %}