From a9ed5889381ad52275eed55d68c15fd6ae19a451 Mon Sep 17 00:00:00 2001 From: Jiayong Li Date: Fri, 27 Jan 2023 19:37:08 +0000 Subject: [PATCH] Change resource requirement of gvcf2fasta and imputation refs #19868 Arvados-DCO-1.1-Signed-off-by: Jiayong Li --- cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl | 2 +- cwl/imputation/bcftools-concat.cwl | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl b/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl index 5ddd3f3bf1..70ad46c654 100644 --- a/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl +++ b/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl @@ -12,7 +12,7 @@ hints: dockerPull: vcfutil ResourceRequirement: ramMin: 5000 - outdirMin: 40000 + tmpdirMin: 2000 inputs: sampleid: type: string diff --git a/cwl/imputation/bcftools-concat.cwl b/cwl/imputation/bcftools-concat.cwl index 88092506c2..6e62e72b9a 100644 --- a/cwl/imputation/bcftools-concat.cwl +++ b/cwl/imputation/bcftools-concat.cwl @@ -12,7 +12,7 @@ hints: ResourceRequirement: coresMin: 2 ramMin: 5000 - tmpdirMin: 10000 + tmpdirMin: 2000 inputs: sample: string vcfs: -- 2.30.2