From a2926020266ff4fda53827ee5e10bfc21ac8c0ae Mon Sep 17 00:00:00 2001 From: Tom Clegg Date: Thu, 29 Oct 2020 02:16:58 -0400 Subject: [PATCH] Update example. Arvados-DCO-1.1-Signed-off-by: Tom Clegg --- example-su92l-1kg.sh | 2 ++ 1 file changed, 2 insertions(+) diff --git a/example-su92l-1kg.sh b/example-su92l-1kg.sh index 4e6082353a..cf5b2b95cf 100755 --- a/example-su92l-1kg.sh +++ b/example-su92l-1kg.sh @@ -23,6 +23,8 @@ ref37_lib=$(lightning import -project ${project} -priority ${priority} -t # ref37_lib=su92l-4zz18-vnhlv3g6yp1azls/library.gob # 539s +ref38_lib=$(lightning import -project ${project} -priority ${priority} -tag-library ${tagset} -skip-ooo=true -output-tiles=true -include-no-calls ${ref_fa}) ; echo ref38_lib=${ref38_lib} + unfiltered=$(lightning import -project ${project} -priority ${priority} -tag-library ${tagset} -skip-ooo=true -output-tiles=true ${fasta}) ; echo unfiltered=${unfiltered} # unfiltered=su92l-4zz18-mz3546bib6oj1gg/library.gob -- 2.30.2