Merge branch '19524-pca'
[lightning.git] / arvados.go
2022-10-14 Tom CleggMerge branch '19524-pca'
2022-10-07 Tom CleggUpdate deps, improve error reporting
2022-01-13 Tom CleggFix deadlock at container finish.
2021-12-30 Tom CleggContainer-watching fixes.
2021-11-24 Tom CleggUse non-preemptible instances.
2021-10-08 Tom CleggAccept PDH on command line.
2021-10-06 Tom CleggUse arvados client for /any/path/$id/, not just /mnt...
2021-09-25 Tom CleggScale keep cache to 2*(openfiles+1).
2021-08-06 Tom CleggAdd copyright headers.
2021-06-15 Tom CleggFixup multiple-file reading.
2021-06-15 Tom CleggAdd "flake" command (read, tidy, write).
2021-06-14 Tom CleggWrite hgvs-based numpy matrix.
2021-03-24 Tom CleggExport selected regions.
2021-03-01 Tom CleggAsk for preemptible instances.
2021-02-08 Tom CleggMove command line tool to subdir.
2021-01-14 Tom CleggFix log message.
2020-12-18 Tom CleggShare a single sitefs for multiple arvados files.
2020-12-08 Tom CleggSave git version in lightning binary collection name...
2020-12-02 Tom CleggImprove import and vcf2fasta performance.
2020-11-25 Tom CleggShare CR refresh throttle when running multiple containers.
2020-11-24 Tom CleggConcurrent-batches mode for vcf2fasta and import.
2020-11-22 Tom CleggLet caller set container output name.
2020-09-11 Tom CleggShow container mem stats.
2020-04-21 Tom CleggDon't log token in websocket url.
2020-04-06 Tom CleggFix up websocket locking.
2020-04-06 Tom CleggExit non-zero if container is cancelled.
2020-04-06 Tom CleggOutput to arvados storage instead of staging on local...
2020-03-11 Tom CleggRefactor websocket listener.
2020-03-11 Tom CleggFix unchecked error.
2020-03-10 Tom CleggContainer request priority flag.
2020-03-05 Tom CleggFilter logs by container on client side of ws connection.
2020-03-05 Tom CleggLess verbose logging.
2020-03-05 Tom CleggUpgrade deps.
2020-03-05 Tom CleggFix up log/event handling.
2020-03-05 Tom CleggI/O pipeline, show arvados container logs.
2020-03-04 Tom CleggAdd plot subcommand.
2020-03-04 Tom CleggTidy log messages.
2020-03-03 Tom CleggAdd pca subcommand.
2020-03-03 Tom CleggRun "filter" and "export" in arvados containers.
2020-03-02 Tom CleggRun "import" in arvados container.