Log path len and # skipped out-of-order tiles per chromosome.
authorTom Clegg <tom@tomclegg.ca>
Wed, 28 Oct 2020 18:11:33 +0000 (14:11 -0400)
committerTom Clegg <tom@tomclegg.ca>
Wed, 28 Oct 2020 18:11:33 +0000 (14:11 -0400)
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>

tilelib.go

index 75e952696ad3c14ef94fe927103ccf06f3747983..5c0ebdfd4688b4cbc5bfb3ad546a7d2dfab8b3c8 100644 (file)
@@ -348,10 +348,9 @@ func (tilelib *tileLibrary) TileFasta(filelabel string, rdr io.Reader) (tileSeq,
                pathcopy := make([]tileLibRef, len(path))
                copy(pathcopy, path)
                ret[job.label] = pathcopy
-               log.Debugf("%s %s tiled with path len %d, skipped %d", filelabel, job.label, len(path), skipped)
 
                basesIn := countBases(job.fasta)
-               log.Infof("%s %s fasta in %d coverage in %d coverage out %d", filelabel, job.label, len(job.fasta), basesIn, basesOut)
+               log.Infof("%s %s fasta in %d coverage in %d coverage out %d path len %d skipped %d", filelabel, job.label, len(job.fasta), basesIn, basesOut, len(path), skipped)
                stats = append(stats, importStats{
                        InputFile:              filelabel,
                        InputLabel:             job.label,