X-Git-Url: https://git.arvados.org/lightning.git/blobdiff_plain/c9c4692503b8e69b9313e2617db7b158843eb773..4c2919861ddfc4c48588cf3336f99efea94eee16:/cmd.go

diff --git a/cmd.go b/cmd.go
index d2f75c996d..514bd1ebb4 100644
--- a/cmd.go
+++ b/cmd.go
@@ -1,3 +1,7 @@
+// Copyright (C) The Lightning Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 package lightning
 
 import (
@@ -6,6 +10,8 @@ import (
 	"io/ioutil"
 	"os"
 	"os/exec"
+	"runtime/debug"
+	"strings"
 
 	"git.arvados.org/arvados.git/lib/cmd"
 	"github.com/mattn/go-isatty"
@@ -24,6 +30,10 @@ var (
 		"annotate":           &annotatecmd{},
 		"export":             &exporter{},
 		"export-numpy":       &exportNumpy{},
+		"flake":              &flakecmd{},
+		"slice":              &slicecmd{},
+		"slice-numpy":        &sliceNumpy{},
+		"anno2vcf":           &anno2vcf{},
 		"numpy-comvar":       &numpyComVar{},
 		"filter":             &filtercmd{},
 		"build-docker-image": &buildDockerImage{},
@@ -33,14 +43,24 @@ var (
 		"diff-fasta":         &diffFasta{},
 		"stats":              &statscmd{},
 		"merge":              &merger{},
+		"dump":               &dump{},
 		"dumpgob":            &dumpGob{},
 	})
 )
 
+func init() {
+	if os.Getenv("GOGC") == "" {
+		debug.SetGCPercent(30)
+	}
+}
+
 func Main() {
 	if !isatty.IsTerminal(os.Stderr.Fd()) {
 		logrus.StandardLogger().Formatter = &logrus.TextFormatter{DisableTimestamp: true}
 	}
+	if len(os.Args) >= 2 && !strings.HasSuffix(os.Args[1], "version") {
+		cmd.Version.RunCommand("lightning", nil, nil, os.Stderr, os.Stderr)
+	}
 	os.Exit(handler.RunCommand(os.Args[0], os.Args[1:], os.Stdin, os.Stdout, os.Stderr))
 }