X-Git-Url: https://git.arvados.org/lightning.git/blobdiff_plain/a26128ae9f71b8881a0cc015cceb547cf5d84097..HEAD:/slice_test.go

diff --git a/slice_test.go b/slice_test.go
deleted file mode 100644
index 0d1fe3a4c6..0000000000
--- a/slice_test.go
+++ /dev/null
@@ -1,64 +0,0 @@
-// Copyright (C) The Lightning Authors. All rights reserved.
-//
-// SPDX-License-Identifier: AGPL-3.0
-
-package lightning
-
-import (
-	"io/ioutil"
-	"os"
-	"os/exec"
-
-	"gopkg.in/check.v1"
-)
-
-type sliceSuite struct{}
-
-var _ = check.Suite(&sliceSuite{})
-
-func (s *sliceSuite) TestImportAndSlice(c *check.C) {
-	tmpdir := c.MkDir()
-
-	err := ioutil.WriteFile(tmpdir+"/chr1-12-100.bed", []byte("chr1\t12\t100\ttest.1\n"), 0644)
-	c.Check(err, check.IsNil)
-
-	exited := (&importer{}).RunCommand("import", []string{
-		"-local=true",
-		"-tag-library", "testdata/tags",
-		"-output-tiles",
-		"-save-incomplete-tiles",
-		"-o", tmpdir + "/library1.gob",
-		"testdata/ref.fasta",
-	}, nil, os.Stderr, os.Stderr)
-	c.Assert(exited, check.Equals, 0)
-
-	exited = (&importer{}).RunCommand("import", []string{
-		"-local=true",
-		"-tag-library", "testdata/tags",
-		"-output-tiles",
-		// "-save-incomplete-tiles",
-		"-o", tmpdir + "/library2.gob",
-		"testdata/pipeline1",
-	}, nil, os.Stderr, os.Stderr)
-	c.Assert(exited, check.Equals, 0)
-
-	exited = (&merger{}).RunCommand("merge", []string{
-		"-local=true",
-		"-o", tmpdir + "/library.gob",
-		tmpdir + "/library1.gob",
-		tmpdir + "/library2.gob",
-	}, nil, os.Stderr, os.Stderr)
-	c.Assert(exited, check.Equals, 0)
-
-	input := tmpdir + "/library.gob"
-
-	exited = (&slicecmd{}).RunCommand("slice", []string{
-		"-local=true",
-		"-input-dir=" + input,
-		"-output-dir=" + tmpdir,
-		"-tags-per-file=2",
-	}, nil, os.Stderr, os.Stderr)
-	c.Check(exited, check.Equals, 0)
-	out, _ := exec.Command("find", tmpdir, "-ls").CombinedOutput()
-	c.Logf("%s", out)
-}