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Gzip gob files.
[lightning.git]
/
filter.go
diff --git
a/filter.go
b/filter.go
index a4ffce8e7aa4d0c6ec355d7625a77ef6c52ff87d..51652681543df2921caee8ec790f4065ee146542 100644
(file)
--- a/
filter.go
+++ b/
filter.go
@@
-11,6
+11,7
@@
import (
"net/http"
_ "net/http/pprof"
"os"
"net/http"
_ "net/http/pprof"
"os"
+ "strings"
"git.arvados.org/arvados.git/sdk/go/arvados"
log "github.com/sirupsen/logrus"
"git.arvados.org/arvados.git/sdk/go/arvados"
log "github.com/sirupsen/logrus"
@@
-165,7
+166,7
@@
func (cmd *filtercmd) RunCommand(prog string, args []string, stdin io.Reader, st
defer infile.Close()
}
log.Print("reading")
defer infile.Close()
}
log.Print("reading")
- cgs, err := ReadCompactGenomes(infile)
+ cgs, err := ReadCompactGenomes(infile
, strings.HasSuffix(*inputFilename, ".gz")
)
if err != nil {
return 1
}
if err != nil {
return 1
}