Gzip gob files.

[lightning.git] / pca.go

diff --git a/pca.go b/pca.go
index 65c69eb6e3a495657fad6284230fc015058e47e4..1120a3b68fbcf9935404fb026ef90bacc3aeb780 100644 (file)
--- a/pca.go
+++ b/pca.go
@@ -11,6 +11,7 @@ import (
        "net/http"
        _ "net/http/pprof"
        "os"
+       "strings"
 
        "git.arvados.org/arvados.git/sdk/go/arvados"
        "github.com/james-bowman/nlp"
@@ -142,7 +143,7 @@ func (cmd *goPCA) RunCommand(prog string, args []string, stdin io.Reader, stdout
                retainNoCalls:  true,
                compactGenomes: map[string][]tileVariantID{},
        }
-       err = tilelib.LoadGob(context.Background(), input, nil)
+       err = tilelib.LoadGob(context.Background(), input, strings.HasSuffix(*inputFilename, ".gz"), nil)
        if err != nil {
                return 1
        }