func (s *tilelibSuite) TestSkipOOO(c *check.C) {
// tags appear in seq: 4, 0, 2 (but skipOOO is false)
tilelib := &tileLibrary{taglib: &s.taglib, skipOOO: false}
- tseq, err := tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err := tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[4]+
"ggggggggggggggggggggggg\n"+
s.tag[0]+
// tags appear in seq: 0, 1, 2 -> don't skip
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[0]+
"cccccccccccccccccccc\n"+
s.tag[1]+
// tags appear in seq: 2, 3, 4 -> don't skip
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[2]+
"cccccccccccccccccccc\n"+
s.tag[3]+
// tags appear in seq: 4, 0, 2 -> skip 4
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[4]+
"cccccccccccccccccccc\n"+
s.tag[0]+
// tags appear in seq: 0, 2, 1 -> skip 2
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[0]+
"cccccccccccccccccccc\n"+
s.tag[2]+
// tags appear in seq: 0, 1, 1, 2 -> skip second tag1
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[0]+
"cccccccccccccccccccc\n"+
s.tag[1]+
// tags appear in seq: 0, 1, 3, 0, 4 -> skip second tag0
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[0]+
"cccccccccccccccccccc\n"+
s.tag[1]+
// tags appear in seq: 0, 1, 3 -> don't skip
tilelib = &tileLibrary{taglib: &s.taglib, skipOOO: true}
- tseq, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
+ tseq, _, err = tilelib.TileFasta("test-label", bytes.NewBufferString(">test-seq\n"+
s.tag[0]+
"cccccccccccccccccccc\n"+
s.tag[1]+