Improve import and vcf2fasta performance.

[lightning.git] / cmd.go

diff --git a/cmd.go b/cmd.go
index 92bd5a29d7017d4a9ecf36e7aa4e1a7006aa6d1e..5789fe4604d3b5f41b75215e762b89868503e821 100644 (file)
--- a/cmd.go
+++ b/cmd.go
@@ -21,7 +21,6 @@ var (
                "ref2genome":         &ref2genome{},
                "vcf2fasta":          &vcf2fasta{},
                "import":             &importer{},
-               "import-stats-plot":  &importstatsplot{},
                "annotate":           &annotatecmd{},
                "export":             &exporter{},
                "export-numpy":       &exportNumpy{},
@@ -57,7 +56,7 @@ func (cmd *buildDockerImage) RunCommand(prog string, args []string, stdin io.Rea
 RUN DEBIAN_FRONTEND=noninteractive \
   apt-get update && \
   apt-get dist-upgrade -y && \
-  apt-get install -y --no-install-recommends bcftools bedtools samtools python2 python3-sklearn python3-matplotlib && \
+  apt-get install -y --no-install-recommends bcftools bedtools samtools python2 python3-sklearn python3-matplotlib ca-certificates && \
   apt-get clean
 `), 0644)
        if err != nil {