Container request priority flag.

[lightning.git] / vcf2fasta.go

diff --git a/vcf2fasta.go b/vcf2fasta.go
index 9f6f085cd854bed1ddd4e6db14a03918b31eff4f..bc44424543645bb0194f4e58dc82474d46851d84 100644 (file)
--- a/vcf2fasta.go
+++ b/vcf2fasta.go
@@ -47,6 +47,7 @@ func (cmd *vcf2fasta) RunCommand(prog string, args []string, stdin io.Reader, st
        flags.StringVar(&cmd.outputDir, "output-dir", "", "output directory")
        flags.IntVar(&cmd.vcpus, "vcpus", 0, "number of VCPUs to request for arvados container (default: 2*number of input files, max 32)")
        flags.BoolVar(&cmd.runLocal, "local", false, "run on local host (default: run in an arvados container)")
+       priority := flags.Int("priority", 500, "container request priority")
        pprof := flags.String("pprof", "", "serve Go profile data at http://`[addr]:port`")
        err = flags.Parse(args)
        if err == flag.ErrHelp {
@@ -89,6 +90,7 @@ func (cmd *vcf2fasta) RunCommand(prog string, args []string, stdin io.Reader, st
                        ProjectUUID: cmd.projectUUID,
                        RAM:         2<<30 + int64(cmd.vcpus)<<28,
                        VCPUs:       cmd.vcpus,
+                       Priority:    *priority,
                }
                err = runner.TranslatePaths(&cmd.refFile)
                if err != nil {