Export hgvs-onehot.

[lightning.git] / tilelib.go

diff --git a/tilelib.go b/tilelib.go
index 455a5262157a24de6aa1f0e31ba402a060fa8b65..fbdbe6a8e4a6d10c371f365715bf3af1df56dcb1 100644 (file)
--- a/tilelib.go
+++ b/tilelib.go
@@ -248,6 +248,36 @@ func (tilelib *tileLibrary) LoadGob(ctx context.Context, rdr io.Reader, gz bool,
        return nil
 }
 
+func (tilelib *tileLibrary) dump(out io.Writer) {
+       printTV := func(tag int, variant tileVariantID) {
+               if variant < 1 {
+                       fmt.Fprintf(out, " -")
+               } else if tag >= len(tilelib.variant) {
+                       fmt.Fprintf(out, " (!tag=%d)", tag)
+               } else if int(variant) > len(tilelib.variant[tag]) {
+                       fmt.Fprintf(out, " (tag=%d,!variant=%d)", tag, variant)
+               } else {
+                       fmt.Fprintf(out, " %x", tilelib.variant[tag][variant-1][:8])
+               }
+       }
+       for refname, refseqs := range tilelib.refseqs {
+               for seqname, seq := range refseqs {
+                       fmt.Fprintf(out, "ref %s %s", refname, seqname)
+                       for _, libref := range seq {
+                               printTV(int(libref.Tag), libref.Variant)
+                       }
+                       fmt.Fprintf(out, "\n")
+               }
+       }
+       for name, cg := range tilelib.compactGenomes {
+               fmt.Fprintf(out, "cg %s", name)
+               for tag, variant := range cg {
+                       printTV(tag/2, variant)
+               }
+               fmt.Fprintf(out, "\n")
+       }
+}
+
 type importStats struct {
        InputFile              string
        InputLabel             string