Fix error message.
[lightning.git] / slicenumpy.go
index 8c040bef6c9008cde0c07657c20b5ad414189603..5b55070679f57dee11adf420f0bdcced353dbdd8 100644 (file)
@@ -45,6 +45,7 @@ type sliceNumpy struct {
        chi2Cases          []bool
        chi2PValue         float64
        pvalueMinFrequency float64
+       maxFrequency       float64
        pcaComponents      int
        minCoverage        int
        includeVariant1    bool
@@ -530,7 +531,7 @@ func (cmd *sliceNumpy) run(prog string, args []string, stdin io.Reader, stdout,
                        if err == errSkip {
                                return nil
                        } else if err != nil {
-                               return fmt.Errorf("%04d: DecodeLibrary(%s): err", infileIdx, infile)
+                               return fmt.Errorf("%04d: DecodeLibrary(%s): %w", infileIdx, infile, err)
                        }
                        tagstart := cgs[cmd.cgnames[0]].StartTag
                        tagend := cgs[cmd.cgnames[0]].EndTag
@@ -1267,7 +1268,7 @@ func (cmd *sliceNumpy) run(prog string, args []string, stdin io.Reader, stdout,
                        for i := range cmd.samples {
                                cmd.samples[i].pcaComponents = make([]float64, outcols)
                                for c := 0; c < outcols; c++ {
-                                       cmd.samples[i].pcaComponents[i] = pca.At(i, c)
+                                       cmd.samples[i].pcaComponents[c] = pca.At(i, c)
                                }
                        }
                        log.Print("done")