cwl/lightning/yml/fasta2numpy-multi-wf-testonehot.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 tagset:
   6   class: File
   7   location: keep:c37923fd267415556962d5c535e9b075+110/tagset.fa.gz
   8 refdirs:
   9   - class: Directory
  10     location: keep:ee5b90cf2d5f3573e6d455ab56e15cdf+761
  11 batchsize: 3
  12 fastadirs:
  13   - class: Directory
  14     location: keep:2xpu4-4zz18-6lg2a1uoanyiyzv
  15   - class: Directory
  16     location: keep:2xpu4-4zz18-bwlg17dkckptebn
  17   - class: Directory
  18     location: keep:2xpu4-4zz18-31tn6gfh4rn6rqb
  19   - class: Directory
  20     location: keep:2xpu4-4zz18-i4gi8cidwnaemt3
  21   - class: Directory
  22     location: keep:2xpu4-4zz18-1vwxurck9m902n0
  23   - class: Directory
  24     location: keep:2xpu4-4zz18-yge3zutgmgecgtl
  25 matchgenome_array: [""]
  26 regions_nestedarray:
  27   - - null
  28 threads_array: [10]
  29 mergeoutput_array: ["false"]
  30 expandregions_array: [0]
  31 phenotypesdir:
  32   class: Directory
  33   location: keep:2xpu4-4zz18-yq0njnojx7kaj34
  34 chrs:
  35   - "chr1"
  36   - "chr2"
  37   - "chr3"
  38   - "chr4"
  39   - "chr5"
  40   - "chr6"
  41   - "chr7"
  42   - "chr8"
  43   - "chr9"
  44   - "chr10"
  45   - "chr11"
  46   - "chr12"
  47   - "chr13"
  48   - "chr14"
  49   - "chr15"
  50   - "chr16"
  51   - "chr17"
  52   - "chr18"
  53   - "chr19"
  54   - "chr20"
  55   - "chr21"
  56   - "chr22"
  57   - "chrX"
  58   - "chrY"
  59 snpeffdatadir:
  60   class: Directory
  61   location: keep:66c966928931de252274772c76f73025+52054
  62 genomeversion_array: ["GRCh38.86"]
  63 dbsnp:
  64   class: File
  65   location: keep:a088b297d614e4c63cbb23f8ad404438+12313/00-All.vcf.gz_renamed.bcf
  66 gnomaddir:
  67   class: Directory
  68   location: keep:c6a8fc877e85d73ac5b165e2d7367e26+675135