projects
/
arvados.git
/ shortlog
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
arvados.git
2013-11-04
Tom Clegg
improve error message when API response is valid JSON...
commit
|
commitdiff
|
tree
|
snapshot
2013-11-04
Tom Clegg
in log_tail_follow, emit recent messages at top of...
commit
|
commitdiff
|
tree
|
snapshot
2013-11-04
Tom Clegg
store the last ~512 KiB of job log messages in a redis...
commit
|
commitdiff
|
tree
|
snapshot
2013-11-04
Tom Clegg
improve error message when crunch-job is not found
commit
|
commitdiff
|
tree
|
snapshot
2013-11-01
Tom Clegg
send queue/worker stats while waiting for job to start...
commit
|
commitdiff
|
tree
|
snapshot
2013-11-01
Tom Clegg
update node info[:slurm_state] when running sinfo....
commit
|
commitdiff
|
tree
|
snapshot
2013-11-01
Tom Clegg
allow crunch-job caller to override CRUNCH_TMP. fixes...
commit
|
commitdiff
|
tree
|
snapshot
2013-10-21
Tom Clegg
fix infinite exec loop
commit
|
commitdiff
|
tree
|
snapshot
2013-10-21
Tom Clegg
fix infinite loop if CONT signal received while todo...
commit
|
commitdiff
|
tree
|
snapshot
2013-10-07
Tom Clegg
upgrade gem versions in Gemfile.lock
commit
|
commitdiff
|
tree
|
snapshot
2013-10-07
Tom Clegg
set/unset ARVADOS_API_HOST_INSECURE in cli setup instru...
commit
|
commitdiff
|
tree
|
snapshot
2013-10-07
Tom Clegg
rename jobs.resource_limits to runtime_constraints
commit
|
commitdiff
|
tree
|
snapshot
2013-10-07
Tom Clegg
add Real Time Genomics pipeline template
commit
|
commitdiff
|
tree
|
snapshot
2013-10-07
Tom Clegg
add crunch scripts for Real Time Genomics pipeline
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
add note about running crunch jobs with no git repo...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
Migrate the test database to 0 instead of trying to...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
add a few fixtures and tests for API. refs #1517 refs...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
fix down-migration: add_column should have been remove_...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
Ignore failure in data-migration part of old schema...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-27
Tom Clegg
Fix exception if api_client_authorization does not...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-26
Tom Clegg
add local job debugging tutorial. closes #1515
commit
|
commitdiff
|
tree
|
snapshot
2013-09-26
Tom Clegg
fix exception when script_version is nil
commit
|
commitdiff
|
tree
|
snapshot
2013-09-26
Tom Clegg
add ruby wrapper around crunch-job
commit
|
commitdiff
|
tree
|
snapshot
2013-09-26
Tom Clegg
move crunch-job to arv-crunch-job and add to arvados...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-24
Tom Clegg
fill in intro-to-git page
commit
|
commitdiff
|
tree
|
snapshot
2013-09-24
Tom Clegg
update API tokens doc to match current API tokens page
commit
|
commitdiff
|
tree
|
snapshot
2013-09-24
Tom Clegg
do not munge hash keys in client-provided request....
commit
|
commitdiff
|
tree
|
snapshot
2013-09-24
Tom Clegg
test API update semantics, confirm put/get cycle preser...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-24
Tom Clegg
update "correct answer" hashes in collection tests...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-17
Tom Clegg
During task setup, if it exists, run /crunch_scripts...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-16
Tom Clegg
pass api_token and pipeline_instance in request body...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-16
Tom Clegg
Modify API discovery document and CLI tool so resource...
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
escape spaces in manifest filenames
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
add CollectionWriter.write_directory_tree()
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
maintain directory structure in collection_extract
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
fix extra empty stream in all_streams() response
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
overwrite existing files in stream_extract
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
add util.listdir_recursive()
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
fix os.path.dirname usage
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
fix out of scope function use
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
mkdir -p in collection_extract()
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
add one-task-per-stream utils
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
fix stream names in CollectionWriter
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
use . as default stream name
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
fix infinite loop in flush_data
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
allow caller to override std* pipes in run_command
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
add zipball_extract
commit
|
commitdiff
|
tree
|
snapshot
2013-09-15
Tom Clegg
add crunch_scripts/file-select
commit
|
commitdiff
|
tree
|
snapshot
2013-09-05
Tom Clegg
Revert "remove extra newline"
commit
|
commitdiff
|
tree
|
snapshot
2013-09-05
Tom Clegg
replace compute_node_security_group config with generic...
commit
|
commitdiff
|
tree
|
snapshot
2013-08-28
Ward Vandewege
Typo in the 'create virtual machine' command.
commit
|
commitdiff
|
tree
|
snapshot
2013-08-22
Tom Clegg
fix :id -> {uuid} subst in discovery doc when generatin...
commit
|
commitdiff
|
tree
|
snapshot
2013-08-13
Tom Clegg
allow admin to change object UUIDs
commit
|
commitdiff
|
tree
|
snapshot
2013-08-01
Tom Clegg
use ssh -T to silence pty warning
commit
|
commitdiff
|
tree
|
snapshot
2013-08-01
Tom Clegg
fix spelling of arv argument
commit
|
commitdiff
|
tree
|
snapshot
2013-08-01
Tom Clegg
clean up jobs page, add expand/collapse
commit
|
commitdiff
|
tree
|
snapshot
2013-08-01
Tom Clegg
tone down css on jobs index
commit
|
commitdiff
|
tree
|
snapshot
2013-08-01
Tom Clegg
fix uuid column heading on jobs index
commit
|
commitdiff
|
tree
|
snapshot
2013-07-31
Tom Clegg
update crunch install doc
commit
|
commitdiff
|
tree
|
snapshot
2013-07-31
Tom Clegg
lock CRUNCH_DISPATCH_LOCKFILE while running, if provided
commit
|
commitdiff
|
tree
|
snapshot
2013-07-31
Tom Clegg
add links beside editable object uuids
commit
|
commitdiff
|
tree
|
snapshot
2013-07-31
Tom Clegg
put back :find_object_by_uuid in virtual_machines contr...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-31
Tom Clegg
fix exception in get_all_logins when user has no author...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-30
Tom Clegg
gitignore arvados-cli gem
commit
|
commitdiff
|
tree
|
snapshot
2013-07-30
Tom Clegg
add auth scopes
commit
|
commitdiff
|
tree
|
snapshot
2013-07-24
Tom Clegg
fix example ssh command
commit
|
commitdiff
|
tree
|
snapshot
2013-07-23
Tom Clegg
show copy-paste-friendly current token at top of API...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-23
Tom Clegg
clean up SDK examples
commit
|
commitdiff
|
tree
|
snapshot
2013-07-22
Tom Clegg
fix top nav extra padding with responsive + small window
commit
|
commitdiff
|
tree
|
snapshot
2013-07-22
Tom Clegg
fix bash "read -d" usage
commit
|
commitdiff
|
tree
|
snapshot
2013-07-22
Tom Clegg
fix backward-compatible env var
commit
|
commitdiff
|
tree
|
snapshot
2013-07-18
Tom Clegg
say "interrupt" nicely instead of a stack trace on ^C
commit
|
commitdiff
|
tree
|
snapshot
2013-07-18
Tom Clegg
add --no-reuse and --no-reuse-finished options to arv...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-18
Samuel Shapiro
added PuTTY instructions to docs site
commit
|
commitdiff
|
tree
|
snapshot
2013-07-18
Ward Vandewege
Fix numbering of tutorials on workbench landing page.
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
use find() instead of where() to get a single object
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
hide account summary bar if user is not activated yet
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
count files instead of specimens on dashboard
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
count accessible objects instead of owned objects on...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
fix "pipeline run" command
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
fix pipeline component names
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
use "nano" instead of pseudocode "edit"
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
new dashboard content
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
add new-pipeline tutorial
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
fix command line parsing
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
add "arv pipeline run" -> "arv-run-pipeline-instance...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
rename wh-run-pipeline-instance to arv-run-pipeline...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
link job and collection uuids to workbench pages
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
strip extra newline
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
add usr/local/arvados/src pythonpath
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
fix namespace
commit
|
commitdiff
|
tree
|
snapshot
2013-07-17
Tom Clegg
prepend to PYTHONPATH instead of replacing
commit
|
commitdiff
|
tree
|
snapshot
2013-07-16
Tom Clegg
fix job dependencies -- grok arrays and hashes in scrip...
commit
|
commitdiff
|
tree
|
snapshot
2013-07-16
Tom Clegg
add collection-merge script
commit
|
commitdiff
|
tree
|
snapshot
2013-07-16
Tom Clegg
add CollectionReader.manifest_text()
commit
|
commitdiff
|
tree
|
snapshot
2013-07-16
Tom Clegg
comments
commit
|
commitdiff
|
tree
|
snapshot
2013-07-16
Tom Clegg
tweak example templates
commit
|
commitdiff
|
tree
|
snapshot
2013-07-15
Tom Clegg
add GATK VariantFiltration tutorial
commit
|
commitdiff
|
tree
|
snapshot
2013-07-15
Tom Clegg
update git commit hash link target
commit
|
commitdiff
|
tree
|
snapshot
2013-07-15
Tom Clegg
add "arv keep check"
commit
|
commitdiff
|
tree
|
snapshot
next