From d84cefc8e4c34f36232e11c58af44d1afbbf89b3 Mon Sep 17 00:00:00 2001 From: Peter Amstutz Date: Thu, 4 Aug 2016 11:36:56 -0400 Subject: [PATCH] 9615: Add check_writable to check for "writable" field and raise UnsupportedRequirement. --- sdk/cwl/arvados_cwl/__init__.py | 12 ++++++++++++ 1 file changed, 12 insertions(+) diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py index fe3249cc02..abe916f17a 100644 --- a/sdk/cwl/arvados_cwl/__init__.py +++ b/sdk/cwl/arvados_cwl/__init__.py @@ -105,9 +105,21 @@ class ArvCwlRunner(object): def add_uploaded(self, src, pair): self.uploaded[src] = pair + def check_writable(self, obj): + if isinstance(obj, dict): + if obj.get("writable"): + raise UnsupportedRequirement("InitialWorkDir feature 'writable: true' not supported") + for v in obj.itervalues(): + self.check_writable(v) + if isinstance(obj, list): + for v in obj: + self.check_writable(v) + def arvExecutor(self, tool, job_order, **kwargs): self.debug = kwargs.get("debug") + tool.visit(self.check_writable) + if kwargs.get("quiet"): logger.setLevel(logging.WARN) logging.getLogger('arvados.arv-run').setLevel(logging.WARN) -- 2.30.2