From 40158e8f7027d51ca704c3fd6039818acf2b21c0 Mon Sep 17 00:00:00 2001 From: Tom Clegg Date: Mon, 14 Dec 2015 16:07:32 -0500 Subject: [PATCH] 7901: Add crunchstat-summary program. --- .gitignore | 7 +- tools/crunchstat-summary/.gitignore | 2 + tools/crunchstat-summary/MANIFEST.in | 1 + tools/crunchstat-summary/agpl-3.0.txt | 661 ++++++++++++++++++ .../crunchstat-summary/bin/crunchstat-summary | 12 + .../crunchstat_summary/__init__.py | 0 .../crunchstat_summary/command.py | 14 + .../crunchstat_summary/summarizer.py | 89 +++ tools/crunchstat-summary/gittaggers.py | 1 + tools/crunchstat-summary/setup.py | 38 + tools/crunchstat-summary/tests/__init__.py | 0 .../tests/logfile_20151204190335.txt.gz | Bin 0 -> 3639 bytes .../logfile_20151204190335.txt.gz.report | 20 + .../tests/logfile_20151210063411.txt.gz | Bin 0 -> 3093 bytes .../logfile_20151210063411.txt.gz.report | 10 + .../tests/logfile_20151210063439.txt.gz | Bin 0 -> 3105 bytes .../logfile_20151210063439.txt.gz.report | 10 + .../crunchstat-summary/tests/test_examples.py | 22 + 18 files changed, 884 insertions(+), 3 deletions(-) create mode 100644 tools/crunchstat-summary/.gitignore create mode 100644 tools/crunchstat-summary/MANIFEST.in create mode 100644 tools/crunchstat-summary/agpl-3.0.txt create mode 100755 tools/crunchstat-summary/bin/crunchstat-summary create mode 100644 tools/crunchstat-summary/crunchstat_summary/__init__.py create mode 100644 tools/crunchstat-summary/crunchstat_summary/command.py create mode 100644 tools/crunchstat-summary/crunchstat_summary/summarizer.py create mode 120000 tools/crunchstat-summary/gittaggers.py create mode 100755 tools/crunchstat-summary/setup.py create mode 100644 tools/crunchstat-summary/tests/__init__.py create mode 100644 tools/crunchstat-summary/tests/logfile_20151204190335.txt.gz create mode 100644 tools/crunchstat-summary/tests/logfile_20151204190335.txt.gz.report create mode 100644 tools/crunchstat-summary/tests/logfile_20151210063411.txt.gz create mode 100644 tools/crunchstat-summary/tests/logfile_20151210063411.txt.gz.report create mode 100644 tools/crunchstat-summary/tests/logfile_20151210063439.txt.gz create mode 100644 tools/crunchstat-summary/tests/logfile_20151210063439.txt.gz.report create mode 100644 tools/crunchstat-summary/tests/test_examples.py diff --git a/.gitignore b/.gitignore index 6cbcccc895..d5c4b3715e 100644 --- a/.gitignore +++ b/.gitignore @@ -2,6 +2,9 @@ .rvmrc *~ *.pyc +*.egg +*.egg-info +.eggs *.gem *.rpm *.deb @@ -18,6 +21,4 @@ sdk/perl/pm_to_blib sdk/java/target *.class sdk/java/log -/tmp -sdk/python/tmp -services/fuse/tmp +tmp diff --git a/tools/crunchstat-summary/.gitignore b/tools/crunchstat-summary/.gitignore new file mode 100644 index 0000000000..2247d5f95a --- /dev/null +++ b/tools/crunchstat-summary/.gitignore @@ -0,0 +1,2 @@ +/build +/dist diff --git a/tools/crunchstat-summary/MANIFEST.in b/tools/crunchstat-summary/MANIFEST.in new file mode 100644 index 0000000000..4db8152d09 --- /dev/null +++ b/tools/crunchstat-summary/MANIFEST.in @@ -0,0 +1 @@ +include agpl-3.0.txt diff --git a/tools/crunchstat-summary/agpl-3.0.txt b/tools/crunchstat-summary/agpl-3.0.txt new file mode 100644 index 0000000000..dba13ed2dd --- /dev/null +++ b/tools/crunchstat-summary/agpl-3.0.txt @@ -0,0 +1,661 @@ + GNU AFFERO GENERAL PUBLIC LICENSE + Version 3, 19 November 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The GNU Affero General Public License is a free, copyleft license for +software and other kinds of works, specifically designed to ensure +cooperation with the community in the case of network server software. + + The licenses for most software and other practical works are designed +to take away your freedom to share and change the works. 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Interpretation of Sections 15 and 16. + + If the disclaimer of warranty and limitation of liability provided +above cannot be given local legal effect according to their terms, +reviewing courts shall apply local law that most closely approximates +an absolute waiver of all civil liability in connection with the +Program, unless a warranty or assumption of liability accompanies a +copy of the Program in return for a fee. + + END OF TERMS AND CONDITIONS + + How to Apply These Terms to Your New Programs + + If you develop a new program, and you want it to be of the greatest +possible use to the public, the best way to achieve this is to make it +free software which everyone can redistribute and change under these terms. + + To do so, attach the following notices to the program. It is safest +to attach them to the start of each source file to most effectively +state the exclusion of warranty; and each file should have at least +the "copyright" line and a pointer to where the full notice is found. + + + Copyright (C) + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU Affero General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU Affero General Public License for more details. + + You should have received a copy of the GNU Affero General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If your software can interact with users remotely through a computer +network, you should also make sure that it provides a way for users to +get its source. For example, if your program is a web application, its +interface could display a "Source" link that leads users to an archive +of the code. There are many ways you could offer source, and different +solutions will be better for different programs; see section 13 for the +specific requirements. + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU AGPL, see +. diff --git a/tools/crunchstat-summary/bin/crunchstat-summary b/tools/crunchstat-summary/bin/crunchstat-summary new file mode 100755 index 0000000000..662d7835cc --- /dev/null +++ b/tools/crunchstat-summary/bin/crunchstat-summary @@ -0,0 +1,12 @@ +#!/usr/bin/env python + +from __future__ import print_function + +import crunchstat_summary.command +import crunchstat_summary.summarizer +import sys + +args = crunchstat_summary.command.ArgumentParser().parse_args(sys.argv[1:]) +s = crunchstat_summary.summarizer.Summarizer(args) +s.run() +print(s.report(), end='') diff --git a/tools/crunchstat-summary/crunchstat_summary/__init__.py b/tools/crunchstat-summary/crunchstat_summary/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/tools/crunchstat-summary/crunchstat_summary/command.py b/tools/crunchstat-summary/crunchstat_summary/command.py new file mode 100644 index 0000000000..8186e5d757 --- /dev/null +++ b/tools/crunchstat-summary/crunchstat_summary/command.py @@ -0,0 +1,14 @@ +import argparse + + +class ArgumentParser(argparse.ArgumentParser): + def __init__(self): + super(ArgumentParser, self).__init__( + description='Summarize resource usage of an Arvados Crunch job') + src = self.add_mutually_exclusive_group() + src.add_argument( + '--job', type=str, metavar='UUID', + help='Look up the specified job and read its log data from Keep') + src.add_argument( + '--log-file', type=str, + help='Read log data from a regular file') diff --git a/tools/crunchstat-summary/crunchstat_summary/summarizer.py b/tools/crunchstat-summary/crunchstat_summary/summarizer.py new file mode 100644 index 0000000000..4e362d990d --- /dev/null +++ b/tools/crunchstat-summary/crunchstat_summary/summarizer.py @@ -0,0 +1,89 @@ +from __future__ import print_function + +import arvados +import gzip +import re +import sys + + +class Summarizer(object): + def __init__(self, args): + self.args = args + + def run(self): + stats_max = {} + for line in self._logdata(): + m = re.search(r'^\S+ \S+ \d+ (?P\d+) stderr crunchstat: (?P\S+) (?P.*?)( -- interval (?P.*))?\n', line) + if not m: + continue + if m.group('category').endswith(':'): + # "notice:" etc. + continue + this_interval_s = None + for group in ['current', 'interval']: + if not m.group(group): + continue + category = m.group('category') + if category not in stats_max: + stats_max[category] = {} + words = m.group(group).split(' ') + for val, stat in zip(words[::2], words[1::2]): + if '.' in val: + val = float(val) + else: + val = int(val) + if group == 'interval': + if stat == 'seconds': + this_interval_s = val + continue + elif not (this_interval_s > 0): + print("BUG? interval stat given with duration {!r}". + format(this_interval_s), + file=sys.stderr) + continue + else: + stat = stat + '__rate' + val = val / this_interval_s + if val > stats_max[category].get(stat, float('-Inf')): + stats_max[category][stat] = val + self.stats_max = stats_max + + def report(self): + return "\n".join(self._report_gen()) + "\n" + + def _report_gen(self): + yield "\t".join(['category', 'metric', 'max', 'max_rate']) + for category, stat_max in self.stats_max.iteritems(): + for stat, val in stat_max.iteritems(): + if stat.endswith('__rate'): + continue + if stat+'__rate' in stat_max: + max_rate = '{:.2f}'.format(stat_max[stat+'__rate']) + else: + max_rate = '-' + if isinstance(val, float): + val = '{:.2f}'.format(val) + yield "\t".join([category, stat, str(val), max_rate]) + + def _logdata(self): + if self.args.log_file: + if self.args.log_file.endswith('.gz'): + return gzip.open(self.args.log_file) + else: + return open(self.args.log_file) + elif self.args.job: + arv = arvados.api('v1') + job = arv.jobs().get(uuid=self.args.job).execute() + if not job['log']: + raise ValueError( + "job {} has no log; live summary not implemented".format( + self.args.job)) + collection = arvados.collection.CollectionReader(job['log']) + filenames = [filename for filename in collection] + if len(filenames) != 1: + raise ValueError( + "collection {} has {} files; need exactly one".format( + job.log, len(filenames))) + return c.open(filenames[0]) + else: + return sys.stdin diff --git a/tools/crunchstat-summary/gittaggers.py b/tools/crunchstat-summary/gittaggers.py new file mode 120000 index 0000000000..a9ad861d81 --- /dev/null +++ b/tools/crunchstat-summary/gittaggers.py @@ -0,0 +1 @@ +../../sdk/python/gittaggers.py \ No newline at end of file diff --git a/tools/crunchstat-summary/setup.py b/tools/crunchstat-summary/setup.py new file mode 100755 index 0000000000..aeb0fe6c33 --- /dev/null +++ b/tools/crunchstat-summary/setup.py @@ -0,0 +1,38 @@ +#!/usr/bin/env python + +import os +import sys +import setuptools.command.egg_info as egg_info_cmd + +from setuptools import setup, find_packages + +SETUP_DIR = os.path.dirname(__file__) or '.' + +try: + import gittaggers + tagger = gittaggers.EggInfoFromGit +except ImportError: + tagger = egg_info_cmd.egg_info + +setup(name='crunchstat_summary', + version='0.1', + description='read crunch log files and summarize resource usage', + author='Arvados', + author_email='info@arvados.org', + url="https://arvados.org", + download_url="https://github.com/curoverse/arvados.git", + license='GNU Affero General Public License, version 3.0', + packages=['crunchstat_summary'], + scripts=[ + 'bin/crunchstat-summary' + ], + data_files=[ + ('share/doc/crunchstat_summary', ['agpl-3.0.txt']), + ], + install_requires=[ + 'arvados-python-client', + ], + test_suite='tests', + zip_safe=False, + cmdclass={'egg_info': tagger}, + ) diff --git a/tools/crunchstat-summary/tests/__init__.py b/tools/crunchstat-summary/tests/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/tools/crunchstat-summary/tests/logfile_20151204190335.txt.gz b/tools/crunchstat-summary/tests/logfile_20151204190335.txt.gz new file mode 100644 index 0000000000000000000000000000000000000000..0042cc59bde2b889a532cb452ee9ca604adbe8f7 GIT binary patch literal 3639 zcmV-74#@EziwFourD;|I18i?+W@&6?UotQ;H8Cv6CXTb%p8YV)VfE57iUBc_@XO4d|9-0_Ffxc219O+% zoD+bgdCY(qjOXnySaK;wwFLb-X z_&x34qO?Cw2FUH3fn;Dyg*1B;X~Q_s$d3o3ai$5fkOawbmToI9&DJ>*HxZU0g<-tIc}&zVKWujuCGHaIrkk~1)<}+ zgxg9o;WH2W-0_KrwL(zmUlX4?ZK6&px>i2V7^Moz? za$DJ-<2awBFixfkkGLl}wN*%L7+PR+-{ZDN1LpbE<(Rw5rrJ>~ERY7`CQhRaA_k3g zw!J0Ssj(x6tg_6b#+?gD7I{xN77anm(Cyc6qU>l}Z9lzqtPraZOoJ%fxXZStwPAjv zA;dMzb?PV4C_`YVIWnN3D4zxOK_#MXHiANoANTv(H>+NK^thX>?n^U!M|C4N zfk1&QP0{bQXgKm~%^LQo$CT!Q%RNB?jsrjR2@N@bEZ3O7C6ue$yP6AaL(YZoJH#fM 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