Tom Clegg [Fri, 15 Jun 2018 19:26:24 +0000 (15:26 -0400)]
13497: Rename SystemNodes to NodeProfiles in config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Jun 2018 19:08:59 +0000 (15:08 -0400)]
13497: Abort startup if Rails API cannot be found.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Jun 2018 19:06:02 +0000 (15:06 -0400)]
13497: Support "run-tests.sh --only go".
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Jun 2018 19:05:17 +0000 (15:05 -0400)]
13497: Bump version numbers for Go packages when lib/ changes.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 21:03:24 +0000 (17:03 -0400)]
13497: Quote file paths in test suite nginx.conf.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 21:02:10 +0000 (17:02 -0400)]
13497: Suppress nginx "info" logs from console.
(unless ARVADOS_DEBUG is set)
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 20:29:11 +0000 (16:29 -0400)]
13497: Send test server logs to {workspace}/tmp/*.log.
Don't send them to console unless ARVADOS_DEBUG is set.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 19:37:13 +0000 (15:37 -0400)]
13497: Add systemd unit to arvados-controller package.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 19:23:08 +0000 (15:23 -0400)]
13497: Accept host key on command line.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 14 Jun 2018 17:34:58 +0000 (13:34 -0400)]
13497: Add controller to health check.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 13 Jun 2018 20:59:52 +0000 (16:59 -0400)]
13497: Set usable path for nginx request body buffering.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 13 Jun 2018 20:43:41 +0000 (16:43 -0400)]
13497: Remove alternate integration test glue in Workbench.
Expect run-tests.sh to have set everything up correctly instead.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 13 Jun 2018 19:51:30 +0000 (15:51 -0400)]
13497: Route API traffic through controller in test suites.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 13 Jun 2018 19:51:07 +0000 (15:51 -0400)]
13497: Don't propagate connection-oriented headers when proxying.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 13 Jun 2018 19:49:26 +0000 (15:49 -0400)]
13497: Send request body when proxying.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 12 Jun 2018 20:39:41 +0000 (16:39 -0400)]
13497: Add timeout for proxy requests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 12 Jun 2018 20:00:07 +0000 (16:00 -0400)]
13497: Proxy requests to Rails API.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 12 Jun 2018 15:10:12 +0000 (11:10 -0400)]
13497: Move common system service code to lib/service.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 7 Jun 2018 19:23:05 +0000 (15:23 -0400)]
13497: Build arvados-server and arvados-controller packages.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 6 Jun 2018 19:25:45 +0000 (15:25 -0400)]
13427: More symlink hack
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 7 Jun 2018 14:20:29 +0000 (10:20 -0400)]
13497: Add arvados-server command.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 7 Jun 2018 13:33:20 +0000 (09:33 -0400)]
13497: Use basename($0) as subcommand, if it is one.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 7 Jun 2018 04:46:47 +0000 (00:46 -0400)]
13497: Add controller, proxy to Rails API.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 5 Jun 2018 19:56:57 +0000 (15:56 -0400)]
Merge branch '13456-phantomjs-died'
refs #13456
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 5 Jun 2018 19:11:38 +0000 (15:11 -0400)]
More gopath symlink hacks.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Tue, 5 Jun 2018 19:10:11 +0000 (16:10 -0300)]
Merge branch '13431-keepproxy-storage-classes-headers'
Closes #13431
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Tue, 5 Jun 2018 19:08:42 +0000 (15:08 -0400)]
13456: Restart driver after each test.
Shot in the dark from https://github.com/teampoltergeist/poltergeist/issues/232
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Tue, 5 Jun 2018 18:43:40 +0000 (15:43 -0300)]
13431: Removes commented code
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 5 Jun 2018 18:37:05 +0000 (15:37 -0300)]
13431: Fixes unrelated test
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 5 Jun 2018 18:22:18 +0000 (15:22 -0300)]
13431: Adds test confirming that keepproxy propagates X-Keep-Storage-Classes
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Tue, 5 Jun 2018 16:57:23 +0000 (12:57 -0400)]
Merge branch '13164-cr-locking'
refs #13164
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 5 Jun 2018 14:56:22 +0000 (10:56 -0400)]
13164: Remove locking. Clean up after races in background instead.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Tue, 5 Jun 2018 00:39:18 +0000 (21:39 -0300)]
13431: Make keepproxy propagate X-Keep-Storage-Classes headers
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 4 Jun 2018 20:24:57 +0000 (17:24 -0300)]
13431: Adds storage class support to Keepclient.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 4 Jun 2018 13:22:13 +0000 (09:22 -0400)]
Merge branch '12061-nm-integration-tests'
refs #12061
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Mon, 4 Jun 2018 13:20:29 +0000 (10:20 -0300)]
Merge branch '13559-ciso8601-pin'
Closes #13559
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 1 Jun 2018 21:12:43 +0000 (18:12 -0300)]
13559: Pin ciso8601 to version <2.0.0 due to API changes.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Fri, 1 Jun 2018 17:35:10 +0000 (13:35 -0400)]
12061: Disable nodemanager integration tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 1 Jun 2018 17:36:43 +0000 (13:36 -0400)]
12061: Remove unreliable check.
"Shutdown because state=down" is possible during a race, when
nodemanager logs "Shutdown success" and polls sinfo again before the
test suite has finished updating the sinfo stub.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 1 Jun 2018 16:50:02 +0000 (12:50 -0400)]
12061: Reduce per-test timeout.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 1 Jun 2018 16:49:42 +0000 (12:49 -0400)]
12061: Fix nodes marked busy while expecting shutdown decision.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 21:17:33 +0000 (17:17 -0400)]
12061: Use shorter retry-after sleeps in integration test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 21:07:13 +0000 (17:07 -0400)]
12061: Don't wait around for test daemon to shutdown gracefully.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 21:06:32 +0000 (17:06 -0400)]
12061: Poll aggressively in integration tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 21:01:15 +0000 (17:01 -0400)]
12061: Allow sub-second poll times and sub-minute shutdown windows.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 19:05:47 +0000 (15:05 -0400)]
Merge branch '13517-buffer-leak'
refs #13517
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 18:39:41 +0000 (14:39 -0400)]
Merge branch '12061-flaky-tests'
refs #12061
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 18:26:59 +0000 (14:26 -0400)]
12061: Explicitly join actor thread after stopping.
Fixes the "nonfatal" test case the same way the "fatal" test case was
fixed in
6706c6d46c6cfb080371b147b60fcaa191bd55a6.
Since the nonfatal case just tests that kill_mock did *not* get
called, the race condition used to make the test ineffectual
occasionally, instead of failing occasionally.
The race condition became visible only after the status reporting test
was added.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 31 May 2018 17:44:18 +0000 (13:44 -0400)]
13517: Fix leaked goroutine and buffer on failed S3 write.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 30 May 2018 20:32:20 +0000 (16:32 -0400)]
12061: Don't round down to 1s in timestamp parser.
ComputeNodeMonitorActor.offer_arvados_pair() pairs nodes only if
first_ping_time >= cloud_node_start_time
However, first_ping_time is passed through arvados_timestamp() before
this comparison, which was truncating the subsecond part -- so the
comparison was effectively
floor(first_ping_time) >= cloud_node_start_time
When FPT and CNST differed only in the subsecond part, this comparison
failed, and the nodes could never be paired. This caused sporadic
failures in tests, where the two values are often separated by less
than a second.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 30 May 2018 20:30:45 +0000 (16:30 -0400)]
12061: Change busywait approach to preserve assertion messages.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 30 May 2018 11:39:30 +0000 (07:39 -0400)]
Merge branch '11162-wes-support' refs #11162
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Tue, 29 May 2018 20:05:27 +0000 (16:05 -0400)]
Merge branch '13513-balance-deadlock'
fixes #13513
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Tue, 29 May 2018 17:16:55 +0000 (13:16 -0400)]
11162: Remove debugging check
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Tue, 29 May 2018 13:46:04 +0000 (09:46 -0400)]
13513: Fix deadlocked workers.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Sat, 26 May 2018 02:04:21 +0000 (22:04 -0400)]
Fix crunch_script for jobs api refs #13516
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Sat, 26 May 2018 01:49:14 +0000 (21:49 -0400)]
Replace unicode copyright character with ASCII in README.Rmd
Fix documentation generation
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 25 May 2018 20:45:12 +0000 (16:45 -0400)]
11162: Add tests for http_to_keep.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 25 May 2018 14:16:07 +0000 (10:16 -0400)]
11162: Add test for --submit-request-uuid
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 25 May 2018 13:55:13 +0000 (09:55 -0400)]
11162: Fix tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 23 May 2018 20:56:40 +0000 (16:56 -0400)]
11162: Bump cwltool for fix in generating basename from url
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 23 May 2018 19:23:44 +0000 (15:23 -0400)]
11162: Smarter http downloads.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 23 May 2018 17:17:40 +0000 (13:17 -0400)]
11162: Add logging about checking cache
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 23 May 2018 16:52:22 +0000 (12:52 -0400)]
11162: Set a default cache time of 24 hours for files fetched over http.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 23 May 2018 00:45:58 +0000 (20:45 -0400)]
11162: Add progress for http data download.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 22 May 2018 20:53:16 +0000 (16:53 -0400)]
11162: Add --submit-request-uuid
Allows container request to be created separately from initialization
that occurs prior to actually committing the container to run.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 14 May 2018 16:02:51 +0000 (12:02 -0400)]
11162: Handle missing git
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 11 May 2018 20:36:54 +0000 (16:36 -0400)]
11162: Support public http and https file references
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Thu, 24 May 2018 15:30:58 +0000 (11:30 -0400)]
2411: Merge branch '2411-another-pass'
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 24 May 2018 02:26:25 +0000 (22:26 -0400)]
2411: Add a bunch of exceptions to .licenseignore for our R sdk
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 24 May 2018 02:26:05 +0000 (22:26 -0400)]
2411: Add license header to sdk/R/README.Rmd
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 24 May 2018 02:17:25 +0000 (22:17 -0400)]
2411: add copyright headers to our R files.
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 24 May 2018 02:16:58 +0000 (22:16 -0400)]
2411: Add support for R source files to build/check-copyright-notices
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 23 May 2018 21:50:16 +0000 (17:50 -0400)]
2411: another pass at adding copyright headers where missing.
refs #2411
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 23 May 2018 14:04:13 +0000 (10:04 -0400)]
Add Veritas Genetics to the AUTHORS file.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Fuad Muhic [Wed, 23 May 2018 13:07:39 +0000 (15:07 +0200)]
Merge branch '13430-allow-storage-classes'
refs #13430
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Fuad Muhic [Wed, 23 May 2018 10:15:31 +0000 (12:15 +0200)]
Merge branch '13453-r-sdk-incorrect-rest-call-fix'
refs #13453
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Fuad Muhic [Wed, 23 May 2018 10:05:41 +0000 (12:05 +0200)]
Added test that checks that saving a committed collection updates the storage_classes_desired
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Peter Amstutz [Wed, 23 May 2018 01:25:58 +0000 (21:25 -0400)]
Tweak arvados-cwl-runner subprocess32 version dependency refs #13516
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 22 May 2018 23:19:21 +0000 (19:19 -0400)]
Fix tests refs #13516
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 22 May 2018 21:08:13 +0000 (17:08 -0400)]
Merge branch '13516-fix-cwl-tests' refs #13516
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 22 May 2018 17:55:54 +0000 (13:55 -0400)]
13516: Bump cwltool, cwltest and subprocess32 versions
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Fuad Muhic [Tue, 22 May 2018 16:08:36 +0000 (18:08 +0200)]
Updated save method of Collection class to always update when
storage_classes is specified.
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Fuad Muhic [Tue, 22 May 2018 15:40:15 +0000 (17:40 +0200)]
Added tests and documentation for save and save_new methods in
Collection class.
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Ward Vandewege [Tue, 22 May 2018 13:58:52 +0000 (09:58 -0400)]
9918: Merge branch '9918-index-timeout'
refs #9918
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 22 May 2018 13:47:40 +0000 (09:47 -0400)]
9918: Merge branch 'master' into 9918-index-timeout
refs #9918
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Fuad Muhic [Tue, 22 May 2018 10:25:28 +0000 (12:25 +0200)]
Added tests to arv-put to cover storage classes feature.
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Peter Amstutz [Mon, 21 May 2018 17:54:19 +0000 (13:54 -0400)]
Merge branch '12995-wb-merge-acct' refs #12995
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 21 May 2018 16:29:19 +0000 (12:29 -0400)]
12995: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Fuad Muhic [Mon, 21 May 2018 15:18:37 +0000 (17:18 +0200)]
Added --storage-classes argument to arv-put.
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>
Peter Amstutz [Mon, 21 May 2018 15:08:17 +0000 (11:08 -0400)]
12995: Add username to link_accounts page.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 21 May 2018 14:59:47 +0000 (10:59 -0400)]
12995: Add user and admin documentation pages.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 18 May 2018 20:57:21 +0000 (16:57 -0400)]
12995: Do nested logout/login to workaround SSO session.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 18 May 2018 20:28:44 +0000 (16:28 -0400)]
12995: Bugfix to support following chained user uuid redirection.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 18 May 2018 19:50:15 +0000 (15:50 -0400)]
9918: Add RequestTimeout config for keep-balance.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 18 May 2018 19:37:23 +0000 (15:37 -0400)]
12995: Don't let admins lose admin privs by linking a non-admin account.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 18 May 2018 19:10:53 +0000 (15:10 -0400)]
Merge branch '13164-container-deadlock'
refs #13164
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 18 May 2018 18:34:43 +0000 (14:34 -0400)]
12995: Add testing
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 18 May 2018 18:29:34 +0000 (14:29 -0400)]
13164: Lock tables in order when locking a container.
Locking involves assigning auth_uuid, which involves looking up
container requests, so both tables must be locked in order to avoid
deadlock.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 18 May 2018 18:02:29 +0000 (14:02 -0400)]
13164: Lock tables in order for container updates.
Otherwise, a container update can lock a container row, then perform
container request queries, which can deadlock with another thread that
locked container_requests first.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
projects / arvados.git / log