Tom Clegg [Tue, 16 Nov 2021 16:06:23 +0000 (11:06 -0500)]
18339: Extract dblocker to a package.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 15 Nov 2021 20:21:56 +0000 (15:21 -0500)]
18339: Call trash_sweep periodically from controller.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 12 Nov 2021 22:00:57 +0000 (17:00 -0500)]
18339: Move trash-sweep from background thread to controller action.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 11 Nov 2021 20:47:05 +0000 (15:47 -0500)]
Merge branch '16817-users-visible-upon-activation'
closes #16817
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 11 Nov 2021 19:54:03 +0000 (14:54 -0500)]
16817: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:51:31 +0000 (14:51 -0300)]
Merge branch '17944-backend-vocabulary-validation-rebased' into main.
Refs #17944
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:39:51 +0000 (14:39 -0300)]
17944: Removes link to old doc version, so that tests pass.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:04:45 +0000 (14:04 -0300)]
17944: Undo changes on tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 20:48:50 +0000 (17:48 -0300)]
17944: Adds upgrade notes.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 10 Nov 2021 20:11:57 +0000 (15:11 -0500)]
Merge branch '18346-container-token'
refs #18346
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 19:31:12 +0000 (16:31 -0300)]
17944: Only check for value aliases collision between different values.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 18:21:17 +0000 (15:21 -0300)]
17944: Improves error reporting on invalid value types.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 10 Nov 2021 16:13:09 +0000 (11:13 -0500)]
18346: Do not forward locally-issued token to own login cluster.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 22:35:18 +0000 (19:35 -0300)]
17944: Fixes tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:59:23 +0000 (18:59 -0300)]
17944: Fixes logging on vocabulary reload.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:45:31 +0000 (18:45 -0300)]
17944: Adds a case-insensitive check for key/value against labels.
Also, improves tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:01:12 +0000 (18:01 -0300)]
17944: Improves keys & value collision validation against aliases. Adds tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 19:36:51 +0000 (16:36 -0300)]
17944: Fixes test. Avoids unnecessary Validate() call.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 19:10:01 +0000 (16:10 -0300)]
17944: Improves error messages.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 18:24:47 +0000 (15:24 -0300)]
17944: Fixes premature vocabulary check success.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Fri, 5 Nov 2021 19:54:44 +0000 (16:54 -0300)]
17944: Fixes tests. Improves health funcs handling.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Fri, 5 Nov 2021 19:07:37 +0000 (16:07 -0300)]
17944: Adds /_health/vocabulary health endpoint. Improves cache refreshing.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 20:06:03 +0000 (16:06 -0400)]
Remve last reference to terraform for now.
refs #17450
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 19:59:26 +0000 (15:59 -0400)]
Remove reference to terraform code that was never checked in.
refs #17450
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 19:55:17 +0000 (15:55 -0400)]
Make the linkchecker more strict so it objects to relative links within
our doc tree that do not have the {{ site.baseurl }} prefix.
Fix all the links that were incorrect that way.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 4 Nov 2021 17:27:38 +0000 (13:27 -0400)]
Fix failing "apt-get update" in test.
refs #18334
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Wed, 3 Nov 2021 15:55:44 +0000 (12:55 -0300)]
17944: Adds vocabulary checking support to links.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 3 Nov 2021 20:33:19 +0000 (16:33 -0400)]
Merge branch '12859-keepstore-fd-leak'
fixes #12859
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 20:03:49 +0000 (17:03 -0300)]
17944: Makes returning an empty Vocabulary also include an empty "tags".
...instead of returning "tags":null which makes workbench2's code to fail.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 1 Nov 2021 20:12:14 +0000 (17:12 -0300)]
17944: Forces vocabulary checking at startup time.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 1 Nov 2021 19:02:20 +0000 (16:02 -0300)]
17944: Vocabulary check errors return status 400 instead of 500.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 25 Oct 2021 16:05:31 +0000 (13:05 -0300)]
17944: Vocabulary loading, monitoring and checking on several object types.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 21 Oct 2021 18:16:14 +0000 (15:16 -0300)]
17944: Updates config knobs and documentation.
Workbench.VocabularyURL will be auto-exported providing the new vocabulary
endpoint, for backwards compatibility.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 16:53:31 +0000 (12:53 -0400)]
Merge branch '18313-arvbox-bootstrap-go-version'
closes #18313
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 16:53:02 +0000 (12:53 -0400)]
18313: Merge branch 'main' into 18313-arvbox-bootstrap-go-version
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 14:04:02 +0000 (10:04 -0400)]
18313: remove leftover grep from Dockerfile.base
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 13:54:40 +0000 (10:54 -0300)]
Merge branch '18318-nokogiri-updates' into main. Closes #18318
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 13:04:48 +0000 (10:04 -0300)]
18318: Updates the nokogiri dependency on API & WB1.
Addresses https://nvd.nist.gov/vuln/detail/CVE-2021-41098
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Mon, 1 Nov 2021 21:56:50 +0000 (17:56 -0400)]
18313: add a test for the grep/awk command used in the arvbox code.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Mon, 1 Nov 2021 18:49:29 +0000 (14:49 -0400)]
12859: Fix unclosed file descriptors in local filesystem driver.
Temporary file was not being closed/removed in the case where client
disconnection is detected while waiting for the volume-level serialize
lock.
Also, GetDeviceID was leaking one file descriptor per volume at
startup time.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Thu, 9 Sep 2021 14:16:49 +0000 (10:16 -0400)]
Tweak docker image tagging
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Fri, 29 Oct 2021 17:47:00 +0000 (13:47 -0400)]
18313: make the arvbox build scripts look up the Go compiler version to
use for bootstrapping by pulling it from lib/install/deps.go
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 29 Oct 2021 17:22:43 +0000 (13:22 -0400)]
Merge branch '18309-faraday-dependency'
closes #18309
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 29 Oct 2021 15:29:34 +0000 (11:29 -0400)]
18309: remove faraday dependency in the arvados-login-sync gem, instead
depend on the correct version of the arvados-google-api-client
gem.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Fri, 29 Oct 2021 15:17:36 +0000 (11:17 -0400)]
Merge branch '18273-java-timeout' refs #18273
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 29 Oct 2021 14:54:19 +0000 (10:54 -0400)]
18273: Tweak java sdk example
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 29 Oct 2021 14:08:48 +0000 (10:08 -0400)]
16817: Add Users.ActivatedUsersAreVisibleToOthers config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Fri, 29 Oct 2021 13:29:29 +0000 (09:29 -0400)]
We now rely on Go 1.16. Unbreak the arvbox build toolchain by switching
to upstream Golang, the buster-backports version is too old.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 28 Oct 2021 23:47:05 +0000 (19:47 -0400)]
Controller test fix.
refs #18183
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 28 Oct 2021 18:57:04 +0000 (14:57 -0400)]
18273: simplify and use version-at-commit.sh
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 28 Oct 2021 18:37:28 +0000 (14:37 -0400)]
18273: Set docker gradle version
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Thu, 28 Oct 2021 18:10:40 +0000 (14:10 -0400)]
Another rails test fix.
refs #18183
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 28 Oct 2021 17:40:31 +0000 (13:40 -0400)]
Merge branch '18264-cwl-test-running-improvements'
refs #18264
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 28 Oct 2021 17:40:12 +0000 (13:40 -0400)]
18264: Merge branch 'main' into 18264-cwl-test-running-improvements
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 28 Oct 2021 16:48:02 +0000 (12:48 -0400)]
Update the test db structure.
refs #18183
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 14 Oct 2021 19:09:00 +0000 (15:09 -0400)]
18273: Increase default java sdk timeouts & make them configuable
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Thu, 28 Oct 2021 14:28:44 +0000 (10:28 -0400)]
Fix up "upgrading to {earlier version}" links.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 28 Oct 2021 14:14:09 +0000 (10:14 -0400)]
Merge branch '16347-container-local-keepstore'
closes #16347
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 28 Oct 2021 13:58:36 +0000 (09:58 -0400)]
16347: Clarify upgrade note.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Wed, 27 Oct 2021 21:33:37 +0000 (17:33 -0400)]
Merge branch '18183-revoke-tokens-when-user-is-disabled'
closes #18183
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 27 Oct 2021 21:32:57 +0000 (17:32 -0400)]
18183: Merge branch 'main' into 18183-revoke-tokens-when-user-is-disabled
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Wed, 27 Oct 2021 18:37:47 +0000 (14:37 -0400)]
Fix top of upgrade notes to 2.3.0
refs #18130
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Wed, 27 Oct 2021 19:48:54 +0000 (15:48 -0400)]
18183: add a database migration that deletes tokens and ssh keys that
belong to inactive users.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 27 Oct 2021 19:05:00 +0000 (15:05 -0400)]
18183: When the user unsetup api endpoint is hit, any tokens owned by
the user should be deleted.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Wed, 27 Oct 2021 19:33:09 +0000 (15:33 -0400)]
16347: Fix race in test helper func.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 27 Oct 2021 18:34:47 +0000 (14:34 -0400)]
16347: Add upgrade note.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 27 Oct 2021 18:12:56 +0000 (14:12 -0400)]
16347: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Tue, 26 Oct 2021 18:52:32 +0000 (14:52 -0400)]
18264: add a script that uses the existing version logic in the build
scripts to generate a package version string from a local Arvados
git checkout.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 26 Oct 2021 18:28:23 +0000 (14:28 -0400)]
Since CWL defaults to 256M of ram, make that the suggested amount for
the `mksquashfs mem` setting in singularity.conf.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 25 Oct 2021 15:28:09 +0000 (11:28 -0400)]
Merge branch '18290-lsf-bsub-args-template'
closes #18290
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 25 Oct 2021 15:27:37 +0000 (11:27 -0400)]
18290: Merge branch 'main' into 18290-lsf-bsub-args-template
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 25 Oct 2021 14:15:21 +0000 (10:15 -0400)]
18290: address review comments.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Sat, 23 Oct 2021 15:42:14 +0000 (11:42 -0400)]
18290: LSF: make the bsub arguments completely configurable.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Fri, 22 Oct 2021 19:29:04 +0000 (15:29 -0400)]
Merge branch '18287-external-url-defaults'
fixes #18287
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Fri, 22 Oct 2021 18:19:19 +0000 (14:19 -0400)]
Merge branch '18289-only-pass-allow-other-when-running-docker'
closes #18289
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 22 Oct 2021 16:47:17 +0000 (12:47 -0400)]
18289: add support to set `mksquashfs mem` for Singularity in our
compute node image builder for cloud setups.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 22 Oct 2021 16:46:45 +0000 (12:46 -0400)]
18289: Address review comments (documentation).
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 22 Oct 2021 14:29:16 +0000 (10:29 -0400)]
18289: Documentation changes to reflect we support both Slurm and LSF.
Refactor the compute node installation instructions. Fix a few
linkchecker warnings.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 23:33:48 +0000 (19:33 -0400)]
18289: documentation: singularity refinements.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 20:53:03 +0000 (16:53 -0400)]
18289: only pass the --allow-other argument to arv-mount when the
runtime is Docker.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 20:42:37 +0000 (16:42 -0400)]
Merge branch '18288-fix-anonymouspublic-token-expiration'
closes #18288
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 20:27:59 +0000 (16:27 -0400)]
18288: when storing the anonymous user token, make sure to clear the
expires_at field.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 20:16:04 +0000 (16:16 -0400)]
18288: when running the db:check_long_lived_tokens and
db:fix_long_lived_tokens rake tasks, do not expire the
anonymouspublic token.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Javier Bértoli [Thu, 21 Oct 2021 19:00:13 +0000 (16:00 -0300)]
Merge branch '17742-provide-custom-certs'
closes #17742
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>
Javier Bértoli [Thu, 21 Oct 2021 18:59:04 +0000 (15:59 -0300)]
17742: update documentation addressing review suggestions
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 18:47:04 +0000 (14:47 -0400)]
Merge branch '18281-login-sync-expired-tokens'
closes #18281
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 18:46:26 +0000 (14:46 -0400)]
Merge branch 'main' into 18281-login-sync-expired-tokens
closes #18281
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 21 Oct 2021 18:37:23 +0000 (14:37 -0400)]
Merge branch '18286-lsf-doc'
refs #18286
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 21 Oct 2021 18:35:43 +0000 (14:35 -0400)]
18287: Remove superfluous {ExternalURL: "-"} values.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Thu, 21 Oct 2021 18:19:42 +0000 (14:19 -0400)]
18281: Rephrase the help text for --force-rotate option.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 21 Oct 2021 18:00:45 +0000 (14:00 -0400)]
18286: Document requirement to add Services.DispatchLSF section.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Wed, 20 Oct 2021 20:28:30 +0000 (16:28 -0400)]
18281: make arvados-login-sync smart enough to replace expired tokens.
Also add a --debug parameter and some debug output.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Wed, 20 Oct 2021 18:28:23 +0000 (14:28 -0400)]
Merge branch '18260-update-cwltool' refs #18260
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 20 Oct 2021 01:11:05 +0000 (21:11 -0400)]
18260: Update when we're going to actually run the workflow
Update cwltool version for bugfixes.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Tue, 19 Oct 2021 20:03:53 +0000 (16:03 -0400)]
Documentation: when starting the Arvados k8s helm chart on GKE, do not
specify the k8s version (use the default).
refs #18278
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Tue, 19 Oct 2021 20:04:29 +0000 (16:04 -0400)]
18260: Update cwltool for fix for integration test 35
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Tue, 19 Oct 2021 20:02:14 +0000 (16:02 -0400)]
Merge branch '18259-doc-architecture-singularity'
closes #18259
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 19 Oct 2021 15:57:19 +0000 (11:57 -0400)]
16347: Reserve memory for keepstore buffers when choosing node size.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 19 Oct 2021 14:08:40 +0000 (10:08 -0400)]
16347: Fix leaky state in test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 19 Oct 2021 13:21:44 +0000 (09:21 -0400)]
16347: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>