Tom Clegg [Thu, 29 Oct 2015 18:47:16 +0000 (14:47 -0400)]
5824: Add some clarifying comments and golint/vet/fmt fixes.
Tom Clegg [Thu, 29 Oct 2015 17:40:18 +0000 (13:40 -0400)]
5824: Add comments and fix variable names, cf. golint.
Tom Clegg [Thu, 29 Oct 2015 16:06:09 +0000 (12:06 -0400)]
5824: Add tests.
Tom Clegg [Thu, 29 Oct 2015 15:09:11 +0000 (11:09 -0400)]
5824: Add test for file in subdir.
Tom Clegg [Thu, 29 Oct 2015 15:08:59 +0000 (11:08 -0400)]
5824: Clarify docs.
Tom Clegg [Wed, 28 Oct 2015 16:17:54 +0000 (12:17 -0400)]
5824: Rename conventional dl.* to collections.*
Tom Clegg [Wed, 28 Oct 2015 15:37:47 +0000 (11:37 -0400)]
5824: Rename cookie to arvados_api_token.
Tom Clegg [Wed, 28 Oct 2015 14:52:34 +0000 (10:52 -0400)]
5824: Rename keepdl to keep-web.
Tom Clegg [Tue, 27 Oct 2015 21:15:16 +0000 (17:15 -0400)]
5824: Clarify docs.
Tom Clegg [Tue, 27 Oct 2015 14:33:08 +0000 (10:33 -0400)]
5824: Fix wrong title.
Tom Clegg [Mon, 19 Oct 2015 19:19:02 +0000 (15:19 -0400)]
5824: Leave "install keep-web" page out of install guide TOC for now.
Tom Clegg [Mon, 19 Oct 2015 17:22:53 +0000 (13:22 -0400)]
5824: Fixup nginx and workbench configs
Tom Clegg [Fri, 2 Oct 2015 02:16:51 +0000 (22:16 -0400)]
5824: gofmt
Tom Clegg [Mon, 7 Sep 2015 07:43:59 +0000 (03:43 -0400)]
5824: Add -attachment-only-host feature.
Tom Clegg [Mon, 7 Sep 2015 06:39:10 +0000 (02:39 -0400)]
5824: Implement "trust all content" mode.
Tom Clegg [Sun, 30 Aug 2015 06:45:58 +0000 (02:45 -0400)]
5824: Add read-error and lots-of-blocks tests.
Tom Clegg [Fri, 28 Aug 2015 15:08:16 +0000 (11:08 -0400)]
5824: Fix up DNS docs.
Tom Clegg [Fri, 28 Aug 2015 06:30:45 +0000 (02:30 -0400)]
5824: Log X-Forwarded-For header value if provided.
Tom Clegg [Fri, 28 Aug 2015 05:45:35 +0000 (01:45 -0400)]
5824: Fail at startup if ARVADOS_API_HOST is not set.
Tom Clegg [Fri, 28 Aug 2015 05:28:43 +0000 (01:28 -0400)]
5824: Accept anonymous tokens on command line.
Tom Clegg [Fri, 28 Aug 2015 05:09:46 +0000 (01:09 -0400)]
5824: Handle various combinations of c= and t= more consistently. Use vhosts in integration tests.
Tom Clegg [Fri, 28 Aug 2015 02:34:21 +0000 (22:34 -0400)]
5824: Comment to explain "authorizer" test helpers.
Tom Clegg [Fri, 28 Aug 2015 02:33:44 +0000 (22:33 -0400)]
5824: Fix up support for PDH in vhostname.
Tom Clegg [Fri, 28 Aug 2015 02:31:19 +0000 (22:31 -0400)]
5824: Modernize install page, cf. other services.
Tom Clegg [Fri, 28 Aug 2015 02:17:54 +0000 (22:17 -0400)]
5824: Clarify difference between keepproxy and keepstore (bandwidth and convenience -- not security).
Tom Clegg [Fri, 28 Aug 2015 02:16:26 +0000 (22:16 -0400)]
5824: Update keepproxy usage.
Tom Clegg [Sun, 16 Aug 2015 04:16:27 +0000 (00:16 -0400)]
5824: Fix up error checking and early-close behavior inCollectionFileReader.
Tom Clegg [Wed, 29 Jul 2015 07:33:19 +0000 (03:33 -0400)]
5824: Add Content-Length header.
Tom Clegg [Wed, 29 Jul 2015 05:56:55 +0000 (01:56 -0400)]
5824: Use vhosts in curl integration tests. Add large file test.
Tom Clegg [Thu, 23 Jul 2015 05:20:28 +0000 (01:20 -0400)]
5824: Support vhost-based collection lookups.
Tom Clegg [Thu, 25 Jun 2015 03:33:08 +0000 (23:33 -0400)]
5824: add (*KeepClient)CollectionFileReader()
Tom Clegg [Thu, 23 Jul 2015 05:09:02 +0000 (01:09 -0400)]
5824: Add doc.go
Tom Clegg [Tue, 23 Jun 2015 23:12:58 +0000 (19:12 -0400)]
5824: Add install doc
Tom Clegg [Wed, 17 Jun 2015 06:47:49 +0000 (02:47 -0400)]
5824: Assign MIME type by file extension. closes #6327
Tom Clegg [Thu, 23 Jul 2015 04:02:11 +0000 (00:02 -0400)]
5824: Add keepdl.
Tom Clegg [Thu, 15 Oct 2015 20:27:58 +0000 (16:27 -0400)]
Merge branch '7159-keepexercise' refs #7159
Tom Clegg [Thu, 15 Oct 2015 20:25:14 +0000 (16:25 -0400)]
7159: Add keep-exercise
Tom Clegg [Thu, 15 Oct 2015 19:47:11 +0000 (15:47 -0400)]
Merge branch 'wtsi-hgi-feature/arv-view'
refs #7204
Tom Clegg [Thu, 15 Oct 2015 19:42:37 +0000 (15:42 -0400)]
7204: Tweak usage message, add a .shellescape, fix error-reporting error
radhika [Thu, 15 Oct 2015 16:35:32 +0000 (12:35 -0400)]
closes #7167
Merge branch '7167-keep-rsync'
radhika [Thu, 15 Oct 2015 16:35:15 +0000 (12:35 -0400)]
Merge branch 'master' into 7167-keep-rsync
radhika [Thu, 15 Oct 2015 16:32:07 +0000 (12:32 -0400)]
Merge branch 'master' into 7167-keep-rsync
Conflicts:
sdk/go/keepclient/keepclient.go
Tom Clegg [Thu, 15 Oct 2015 16:21:07 +0000 (12:21 -0400)]
Merge branch '7173-jessie' refs #7173
Tom Clegg [Mon, 31 Aug 2015 19:00:13 +0000 (15:00 -0400)]
7173: Add jessie to supported distro list.
radhika [Thu, 15 Oct 2015 16:18:20 +0000 (12:18 -0400)]
7167: update the progress message to say "est. time remaining" instead of "ETA" which is not accurate in this case.
radhika [Thu, 15 Oct 2015 15:56:36 +0000 (11:56 -0400)]
7167: rename the newly added StopKeepServers as StopKeepWithParams; it now sounds similar to StartKeepWithParams and is self explanatory.
radhika [Thu, 15 Oct 2015 15:08:10 +0000 (11:08 -0400)]
Merge branch '7167-keep-rsync' of git.curoverse.com:arvados into 7167-keep-rsync
Tom Clegg [Thu, 15 Oct 2015 15:02:30 +0000 (11:02 -0400)]
7167: Always pass --num-keep-servers to python wrapper. Update comments.
Tom Clegg [Thu, 15 Oct 2015 14:50:13 +0000 (10:50 -0400)]
7167: Rename conf flags to -src and -dst to match arv-copy. Always add .conf for short form.
Tom Clegg [Thu, 15 Oct 2015 14:48:33 +0000 (10:48 -0400)]
7167: Fix up progress/ETA logging.
Peter Amstutz [Thu, 15 Oct 2015 14:32:26 +0000 (10:32 -0400)]
Merge branch '7491-go-keepclient-retry' closes #7491
Peter Amstutz [Thu, 15 Oct 2015 14:16:27 +0000 (10:16 -0400)]
7491: Remove unnecessary writable service roots from GET tests.
Tom Clegg [Thu, 15 Oct 2015 13:18:43 +0000 (09:18 -0400)]
Merge branch 'master' into wtsi-hgi-feature/arv-view
Conflicts:
sdk/cli/bin/arv
radhika [Thu, 15 Oct 2015 03:01:13 +0000 (23:01 -0400)]
Merge branch 'master' into 7167-keep-rsync
radhika [Thu, 15 Oct 2015 03:00:05 +0000 (23:00 -0400)]
7167: log progress during keep-rsync and several test improvements.
Brett Smith [Wed, 14 Oct 2015 20:59:40 +0000 (16:59 -0400)]
API server needs an arvados-cli with crunch-job --docker-bin.
crunch-dispatch was extended to use `crunch-job --docker-bin` in
#6838. This commit simply updates the Gemfile to ensure this
dependency is satisfied. No issue #.
radhika [Wed, 14 Oct 2015 19:15:15 +0000 (15:15 -0400)]
Merge branch 'master' into 7167-keep-rsync
Tom Clegg [Wed, 14 Oct 2015 18:51:34 +0000 (14:51 -0400)]
Merge branch '7167-propagate-error' refs #7167
Tom Clegg [Wed, 14 Oct 2015 18:51:01 +0000 (14:51 -0400)]
Merge branch '7159-clean-index' refs #7159 refs #7168
radhika [Wed, 14 Oct 2015 17:43:54 +0000 (13:43 -0400)]
7167: loadConfig setupKeepclient do only one set at a time.
radhika [Wed, 14 Oct 2015 02:27:41 +0000 (22:27 -0400)]
7167: when the config file does not contain '/', use $HOME/.config/arvados/<filename>.
radhika [Wed, 14 Oct 2015 01:47:06 +0000 (21:47 -0400)]
7167: replace keep_existing with num_keep_servers and use it create all required keep servers at once.
radhika [Wed, 14 Oct 2015 01:16:35 +0000 (21:16 -0400)]
7167: replace the keep_existing logic and create all 3 keep servers at once and use the first two as src keepservers and the last one as the dst keep server.
radhika [Tue, 13 Oct 2015 21:01:46 +0000 (17:01 -0400)]
7167: Convert blobSigningKey also into local variable and make necessary changes to accommodate this change.
Remove the New method added in arvadosclient.go and revert MakeArvadosClient to what it was before.
radhika [Tue, 13 Oct 2015 19:46:26 +0000 (15:46 -0400)]
7167: update run_test_servers.py to use action="store_true" instead of converting string to boolean.
Tom Clegg [Tue, 13 Oct 2015 19:33:33 +0000 (15:33 -0400)]
7159: Address golint complaints
Tom Clegg [Tue, 13 Oct 2015 19:33:02 +0000 (15:33 -0400)]
7159: Omit non-Keep blobs from index
radhika [Tue, 13 Oct 2015 17:38:52 +0000 (13:38 -0400)]
Merge branch 'master' into 7167-keep-rsync
radhika [Tue, 13 Oct 2015 17:37:33 +0000 (13:37 -0400)]
7167: Convert most of the globals in keep-sync into locals and update all the code and tests as needed.
Tom Clegg [Tue, 13 Oct 2015 16:11:23 +0000 (12:11 -0400)]
7159: Return benign os.ErrNotExist error from Compare to avoid excessive logs. refs #7159
Tom Clegg [Tue, 13 Oct 2015 15:17:49 +0000 (11:17 -0400)]
7159: Fix error handling when reading full size block. refs #7159
Tom Clegg [Mon, 12 Oct 2015 17:41:04 +0000 (13:41 -0400)]
7167: Propagate read errors to caller. Fixes failing TestTransferShortBuffer.
Tom Clegg [Mon, 12 Oct 2015 16:40:38 +0000 (12:40 -0400)]
Warn about unhandled case if broken node has no ping time. refs #7286
Tom Clegg [Mon, 12 Oct 2015 16:06:47 +0000 (12:06 -0400)]
Merge branch '7159-empty-blob-race' refs #7159
Tom Clegg [Mon, 12 Oct 2015 13:33:24 +0000 (09:33 -0400)]
7159: Shorten race waits during generic tests
Tom Clegg [Fri, 9 Oct 2015 21:09:42 +0000 (17:09 -0400)]
7159: Log when waiting for get/put races
Tom Clegg [Thu, 8 Oct 2015 18:00:00 +0000 (14:00 -0400)]
7159: Exclude new empty blocks from index.
Tom Clegg [Thu, 8 Oct 2015 17:30:18 +0000 (13:30 -0400)]
7159: Test race deadline
Tom Clegg [Thu, 8 Oct 2015 16:52:17 +0000 (12:52 -0400)]
7159: Work around CreateBlob race by polling for updates when a brand new blob is found empty.
radhika [Mon, 12 Oct 2015 14:40:38 +0000 (10:40 -0400)]
7167: break load config logic out of main into loadConfig func and add several tests.
radhika [Mon, 12 Oct 2015 13:13:45 +0000 (09:13 -0400)]
7167: some more error tests such as error getting block from src and error putting block to dst.
radhika [Sat, 10 Oct 2015 00:09:17 +0000 (20:09 -0400)]
7167: stop rsync operation on any errors during Get or Put operations; add additional tests.
radhika [Fri, 9 Oct 2015 22:01:14 +0000 (18:01 -0400)]
Merge branch '7167-keep-rsync-test-setup' into 7167-keep-rsync
radhika [Fri, 9 Oct 2015 22:00:56 +0000 (18:00 -0400)]
Merge branch 'master' into 7167-keep-rsync-test-setup
Conflicts:
sdk/go/keepclient/perms.go
sdk/go/keepclient/perms_test.go
services/keepstore/perms.go
services/keepstore/perms_test.go
Peter Amstutz [Fri, 9 Oct 2015 20:41:52 +0000 (16:41 -0400)]
7491: Fix response body close, error logging.
Peter Amstutz [Fri, 9 Oct 2015 20:06:14 +0000 (16:06 -0400)]
Merge branch 'master' into 7491-go-keepclient-retry
Conflicts:
sdk/go/keepclient/keepclient.go
Peter Amstutz [Fri, 9 Oct 2015 19:52:36 +0000 (15:52 -0400)]
7491: Remove KeepServerError, all errors are BlockNotFound errors for now.
Refactor Get() and Ask() to use common function.
Tom Clegg [Fri, 9 Oct 2015 19:48:28 +0000 (15:48 -0400)]
Merge branch '7491-keepclient-bugs' refs #7491
Peter Amstutz [Fri, 9 Oct 2015 19:05:10 +0000 (15:05 -0400)]
7491: Go through entire server list instead of immediately retrying on error.
Only retry servers that resulted in an error (network or HTTP 5xx error).
Tom Clegg [Fri, 9 Oct 2015 18:51:13 +0000 (14:51 -0400)]
Merge branch '7167-blob-sign-sdk' refs #7167
Peter Amstutz [Fri, 9 Oct 2015 18:50:37 +0000 (14:50 -0400)]
7491: Manual merge with 7491-keepclient-bugs
Peter Amstutz [Fri, 9 Oct 2015 18:36:15 +0000 (14:36 -0400)]
7491: Add test that default replication is read from discovery document.
Tom Clegg [Fri, 9 Oct 2015 18:28:29 +0000 (14:28 -0400)]
7167: Deobfuscate variable names
Tom Clegg [Fri, 9 Oct 2015 18:20:15 +0000 (14:20 -0400)]
7167: Update tests and comments to new error vars.
Tom Clegg [Thu, 8 Oct 2015 21:50:22 +0000 (17:50 -0400)]
7167: Fix up comments
Tom Clegg [Thu, 8 Oct 2015 21:33:55 +0000 (17:33 -0400)]
7167: Replace duplicate tests with PermissionSecret tests
Peter Amstutz [Fri, 9 Oct 2015 16:18:57 +0000 (12:18 -0400)]
7491: Go keepclient retries GET on either network error, or 500 error from
server. Retry count is KeepClient.Retries. Also updated KeepClient
constructor to use "defaultCollectionReplication" from discovery document if
available.
Brett Smith [Fri, 9 Oct 2015 15:24:50 +0000 (11:24 -0400)]
Version the CWL runner's dependency on cwltool.
cwltool development is continuing on with API-incompatible changes.
No issue #.
radhika [Fri, 9 Oct 2015 12:44:46 +0000 (08:44 -0400)]
Merge branch '7167-keep-rsync-test-setup' into 7167-keep-rsync
radhika [Fri, 9 Oct 2015 12:43:37 +0000 (08:43 -0400)]
7167: default replications count from discovery doc test updates.
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