Ward Vandewege [Mon, 22 Nov 2021 14:49:47 +0000 (09:49 -0500)]
Merge branch '18308-enable-collection-versioning'
closes #18308
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 22 Nov 2021 14:49:22 +0000 (09:49 -0500)]
18308: Merge branch 'main' into 18308-enable-collection-versioning
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Fri, 19 Nov 2021 22:29:50 +0000 (17:29 -0500)]
Merge branch '18298-lsf-no-suitable-hosts'
refs #18298
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Fri, 19 Nov 2021 01:15:07 +0000 (20:15 -0500)]
Using curl against https requires the ca-certificates package, update
the docs accordingly. Also remove the 'silent' flag from curl so that
errors are shown.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 18 Nov 2021 21:43:33 +0000 (16:43 -0500)]
18298: Use bjobs select[] args, cancel on "no suitable host".
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Thu, 18 Nov 2021 21:20:22 +0000 (16:20 -0500)]
18308: reduce the default value for PreserveVersionIfIdle to 10s.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 18 Nov 2021 20:01:06 +0000 (15:01 -0500)]
Merge branch '18339-sweep-trash-lock'
fixes #18339
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 18 Nov 2021 20:00:19 +0000 (15:00 -0500)]
18339: Tweak upgrade note.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 18 Nov 2021 16:52:01 +0000 (11:52 -0500)]
18339: Clarify consequences of delete-role bug.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 18 Nov 2021 16:50:58 +0000 (11:50 -0500)]
18339: Fix scheduled deletion of non-project group.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 18 Nov 2021 16:37:06 +0000 (11:37 -0500)]
Merge branch '17840-unparsed-args'
fixes #17840
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 22:03:57 +0000 (17:03 -0500)]
Merge branch '17962-check-wf-definition' refs #17962
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 22:00:59 +0000 (17:00 -0500)]
17962: Add line about printing to stdout on description
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 21:58:59 +0000 (16:58 -0500)]
17962: Add test that uuid of project is printed on stdout
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Wed, 17 Nov 2021 21:42:13 +0000 (16:42 -0500)]
18298: Request pend_reason field when polling bjobs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 21:19:14 +0000 (16:19 -0500)]
17962: Improve error handling when copying projects and workflows
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Wed, 17 Nov 2021 20:49:34 +0000 (15:49 -0500)]
18339: Delete previously trashed/zombie role groups.
(Role groups can no longer be trashed, see #18340.)
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 17 Nov 2021 20:37:00 +0000 (15:37 -0500)]
Merge branch '18387-keepstore-version'
fixes #18387
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 17 Nov 2021 20:35:55 +0000 (15:35 -0500)]
18339: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 17 Nov 2021 20:35:32 +0000 (15:35 -0500)]
18339: Add sys/trash_sweep to discovery doc.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 17 Nov 2021 20:34:44 +0000 (15:34 -0500)]
18339: Add test cases.
Existing tests ported from other test suites, but missed adding the
new file in previous commit.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 18:28:37 +0000 (15:28 -0300)]
Merge branch '18363-managed-properties-doc-improvement' into main.
Closes #18363
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 18:26:49 +0000 (15:26 -0300)]
18363: Fixes typo.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 17:55:16 +0000 (12:55 -0500)]
Merge branch '18285-cwl-hint-warning' refs #18285
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 15:16:54 +0000 (12:16 -0300)]
Merge branch '18336-httplib2-pysdk-issues' into main. Closes #18336
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 15:03:42 +0000 (12:03 -0300)]
Merge branch '18340-delete-role-filter-groups' into main. Closes #18340.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Wed, 17 Nov 2021 14:53:52 +0000 (09:53 -0500)]
18285: Bump cwltool and schema-salad dependencies
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 14:50:24 +0000 (11:50 -0300)]
18336: Pins upper version limit for httplib2 dependency on PySDK.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 17 Nov 2021 11:28:36 +0000 (08:28 -0300)]
18340: Only trash project groups on delete calls.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 16 Nov 2021 22:24:16 +0000 (19:24 -0300)]
18340: Adds test for role & filter group deletion.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Tue, 16 Nov 2021 21:56:16 +0000 (16:56 -0500)]
Merge branch 'kinow/contributing'
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Bruno P. Kinoshita [Mon, 15 Nov 2021 22:04:03 +0000 (11:04 +1300)]
Update CONTRIBUTING.md
Arvados-DCO-1.1-Signed-off-by: Bruno P. Kinoshita <brunodepaulak@yahoo.com.br>
Tom Clegg [Tue, 16 Nov 2021 21:34:45 +0000 (16:34 -0500)]
Merge branch '18376-nfs-readdirent'
fixes #18376
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 21:32:00 +0000 (16:32 -0500)]
18387: Fix incorrect version reported in logs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 21:10:59 +0000 (16:10 -0500)]
18339: Add SysTrashSweep to API stub.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 21:06:53 +0000 (16:06 -0500)]
18339: Update accidental-route test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 20:28:06 +0000 (15:28 -0500)]
17840: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 20:27:27 +0000 (15:27 -0500)]
17840: Use cmd.ParseFlags for arvados-package command.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 16 Nov 2021 19:38:29 +0000 (14:38 -0500)]
18376: Complete series of readdirent calls as quickly as possible.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 16 Nov 2021 18:48:47 +0000 (15:48 -0300)]
Merge branch '17635-pysdk-collection-preserve-version' into main. Closes #17635
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 16 Nov 2021 18:46:52 +0000 (15:46 -0300)]
17635: Further improves documentation on the arvados.Collection class.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 16 Nov 2021 17:22:56 +0000 (14:22 -0300)]
18363: Adds missing use case for protected property.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 16 Nov 2021 16:17:52 +0000 (13:17 -0300)]
17635: Improving documentation on preserve_version field.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Tue, 16 Nov 2021 16:06:23 +0000 (11:06 -0500)]
18339: Extract dblocker to a package.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 15 Nov 2021 20:21:56 +0000 (15:21 -0500)]
18339: Call trash_sweep periodically from controller.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Mon, 15 Nov 2021 18:12:19 +0000 (15:12 -0300)]
Merge branch '18215-select-param-update-create' into main. Refs #18215
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 15 Nov 2021 18:11:30 +0000 (15:11 -0300)]
18215: Adds tests for Create & Update calls.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Mon, 15 Nov 2021 17:50:54 +0000 (12:50 -0500)]
Merge branch '18316-fuse-read-only' refs #18316
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Mon, 15 Nov 2021 17:31:31 +0000 (12:31 -0500)]
18308: enable collection versioning by default, with a 30s idle timeout.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Fri, 12 Nov 2021 22:21:52 +0000 (17:21 -0500)]
18316: Add test & record enable_write on FuseArvadosFile
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 12 Nov 2021 22:00:57 +0000 (17:00 -0500)]
18339: Move trash-sweep from background thread to controller action.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Fri, 12 Nov 2021 21:26:15 +0000 (16:26 -0500)]
18316: Propagate value of enable_write & don't try to save on flush
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Fri, 12 Nov 2021 19:17:14 +0000 (16:17 -0300)]
18215: Only respond with selected fields on create & update calls.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Fri, 12 Nov 2021 14:38:05 +0000 (09:38 -0500)]
Merge branch '18346-crunchrun-no-events' refs #18346
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 11 Nov 2021 22:32:01 +0000 (17:32 -0500)]
18346: Only disable websockets when all container mounts are by PDH
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 11 Nov 2021 21:13:44 +0000 (16:13 -0500)]
18346: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 11 Nov 2021 21:10:54 +0000 (16:10 -0500)]
18346: Add arv-mount --disable-event-listening
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Thu, 11 Nov 2021 20:47:05 +0000 (15:47 -0500)]
Merge branch '16817-users-visible-upon-activation'
closes #16817
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 11 Nov 2021 20:36:03 +0000 (15:36 -0500)]
17840: Fix crash on config load error.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 11 Nov 2021 18:50:36 +0000 (13:50 -0500)]
17840: Deduplicate flag-parsing code.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 20:24:09 +0000 (17:24 -0300)]
17635: Adds support for versioning to Collection.save() and save_new()
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Thu, 11 Nov 2021 19:54:03 +0000 (14:54 -0500)]
16817: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:51:31 +0000 (14:51 -0300)]
Merge branch '17944-backend-vocabulary-validation-rebased' into main.
Refs #17944
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:39:51 +0000 (14:39 -0300)]
17944: Removes link to old doc version, so that tests pass.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 11 Nov 2021 17:04:45 +0000 (14:04 -0300)]
17944: Undo changes on tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 20:48:50 +0000 (17:48 -0300)]
17944: Adds upgrade notes.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 10 Nov 2021 20:11:57 +0000 (15:11 -0500)]
Merge branch '18346-container-token'
refs #18346
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 10 Nov 2021 20:10:06 +0000 (15:10 -0500)]
17840: Fix duplicate error message re parsing command line args.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 19:31:12 +0000 (16:31 -0300)]
17944: Only check for value aliases collision between different values.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 10 Nov 2021 18:21:17 +0000 (15:21 -0300)]
17944: Improves error reporting on invalid value types.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 10 Nov 2021 16:13:09 +0000 (11:13 -0500)]
18346: Do not forward locally-issued token to own login cluster.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 22:35:18 +0000 (19:35 -0300)]
17944: Fixes tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:59:23 +0000 (18:59 -0300)]
17944: Fixes logging on vocabulary reload.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:45:31 +0000 (18:45 -0300)]
17944: Adds a case-insensitive check for key/value against labels.
Also, improves tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 21:01:12 +0000 (18:01 -0300)]
17944: Improves keys & value collision validation against aliases. Adds tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 19:36:51 +0000 (16:36 -0300)]
17944: Fixes test. Avoids unnecessary Validate() call.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 19:10:01 +0000 (16:10 -0300)]
17944: Improves error messages.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Nov 2021 18:24:47 +0000 (15:24 -0300)]
17944: Fixes premature vocabulary check success.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 8 Nov 2021 19:22:20 +0000 (14:22 -0500)]
17840: Check for unparsed command line arguments.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Fri, 5 Nov 2021 19:54:44 +0000 (16:54 -0300)]
17944: Fixes tests. Improves health funcs handling.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Fri, 5 Nov 2021 19:07:37 +0000 (16:07 -0300)]
17944: Adds /_health/vocabulary health endpoint. Improves cache refreshing.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 20:06:03 +0000 (16:06 -0400)]
Remve last reference to terraform for now.
refs #17450
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 19:59:26 +0000 (15:59 -0400)]
Remove reference to terraform code that was never checked in.
refs #17450
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 4 Nov 2021 19:55:17 +0000 (15:55 -0400)]
Make the linkchecker more strict so it objects to relative links within
our doc tree that do not have the {{ site.baseurl }} prefix.
Fix all the links that were incorrect that way.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 4 Nov 2021 17:27:38 +0000 (13:27 -0400)]
Fix failing "apt-get update" in test.
refs #18334
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Wed, 3 Nov 2021 15:55:44 +0000 (12:55 -0300)]
17944: Adds vocabulary checking support to links.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 3 Nov 2021 20:33:19 +0000 (16:33 -0400)]
Merge branch '12859-keepstore-fd-leak'
fixes #12859
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 20:03:49 +0000 (17:03 -0300)]
17944: Makes returning an empty Vocabulary also include an empty "tags".
...instead of returning "tags":null which makes workbench2's code to fail.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 1 Nov 2021 20:12:14 +0000 (17:12 -0300)]
17944: Forces vocabulary checking at startup time.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 1 Nov 2021 19:02:20 +0000 (16:02 -0300)]
17944: Vocabulary check errors return status 400 instead of 500.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 25 Oct 2021 16:05:31 +0000 (13:05 -0300)]
17944: Vocabulary loading, monitoring and checking on several object types.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 21 Oct 2021 18:16:14 +0000 (15:16 -0300)]
17944: Updates config knobs and documentation.
Workbench.VocabularyURL will be auto-exported providing the new vocabulary
endpoint, for backwards compatibility.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 16:53:31 +0000 (12:53 -0400)]
Merge branch '18313-arvbox-bootstrap-go-version'
closes #18313
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 16:53:02 +0000 (12:53 -0400)]
18313: Merge branch 'main' into 18313-arvbox-bootstrap-go-version
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 2 Nov 2021 14:04:02 +0000 (10:04 -0400)]
18313: remove leftover grep from Dockerfile.base
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 13:54:40 +0000 (10:54 -0300)]
Merge branch '18318-nokogiri-updates' into main. Closes #18318
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 2 Nov 2021 13:04:48 +0000 (10:04 -0300)]
18318: Updates the nokogiri dependency on API & WB1.
Addresses https://nvd.nist.gov/vuln/detail/CVE-2021-41098
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Mon, 1 Nov 2021 21:56:50 +0000 (17:56 -0400)]
18313: add a test for the grep/awk command used in the arvbox code.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 29 Jun 2021 14:11:40 +0000 (10:11 -0400)]
17840: Check for unparsed command line arguments.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 1 Nov 2021 18:49:29 +0000 (14:49 -0400)]
12859: Fix unclosed file descriptors in local filesystem driver.
Temporary file was not being closed/removed in the case where client
disconnection is detected while waiting for the volume-level serialize
lock.
Also, GetDeviceID was leaking one file descriptor per volume at
startup time.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>