arvados.git
11 years agorename metadata attributes to head/tail
Tom Clegg [Fri, 18 Jan 2013 01:16:28 +0000 (17:16 -0800)]
rename metadata attributes to head/tail

11 years agotag ec2 nodes; add --client-token to ec2-run command for idempotency
Tom Clegg [Thu, 17 Jan 2013 21:48:32 +0000 (13:48 -0800)]
tag ec2 nodes; add --client-token to ec2-run command for idempotency

11 years agoput AMI id in config file instead of hard coded
Tom Clegg [Thu, 17 Jan 2013 21:25:13 +0000 (13:25 -0800)]
put AMI id in config file instead of hard coded

11 years agoUpdate to latest Rails 3.1 release
Ward Vandewege [Thu, 17 Jan 2013 16:11:28 +0000 (11:11 -0500)]
Update to latest Rails 3.1 release

11 years agoprovide metadata head_kind, head_uuid in api response
Tom Clegg [Thu, 17 Jan 2013 09:15:46 +0000 (01:15 -0800)]
provide metadata head_kind, head_uuid in api response
if value is orvos#type#uuid; tweak "specimen" inflections

11 years agofix error handling
Tom Clegg [Wed, 16 Jan 2013 22:43:37 +0000 (14:43 -0800)]
fix error handling

11 years agoremove extraneous Metadata#create
Tom Clegg [Wed, 16 Jan 2013 22:43:25 +0000 (14:43 -0800)]
remove extraneous Metadata#create

11 years agoadd boilerplate for Project resource
Tom Clegg [Wed, 16 Jan 2013 22:43:01 +0000 (14:43 -0800)]
add boilerplate for Project resource

11 years agofix missing route
Tom Clegg [Wed, 16 Jan 2013 22:01:25 +0000 (14:01 -0800)]
fix missing route

11 years agoadd Project resource
Tom Clegg [Wed, 16 Jan 2013 21:57:24 +0000 (13:57 -0800)]
add Project resource

11 years agotweak uuid generators - use last N digits instead of first N
Tom Clegg [Wed, 16 Jan 2013 21:19:56 +0000 (13:19 -0800)]
tweak uuid generators - use last N digits instead of first N

11 years agoadd Specimen resource
Tom Clegg [Wed, 16 Jan 2013 02:55:17 +0000 (18:55 -0800)]
add Specimen resource

11 years agoadd /orvos/v1/schema
Tom Clegg [Tue, 15 Jan 2013 22:54:43 +0000 (14:54 -0800)]
add /orvos/v1/schema

11 years agoMore capistrano fixes
Ward Vandewege [Tue, 15 Jan 2013 22:22:56 +0000 (17:22 -0500)]
More capistrano fixes

11 years agoadd /collections html view, dry up CollectionsController
Tom Clegg [Tue, 15 Jan 2013 20:15:55 +0000 (12:15 -0800)]
add /collections html view, dry up CollectionsController

11 years agoremove extraneous html tag
Tom Clegg [Tue, 15 Jan 2013 20:12:56 +0000 (12:12 -0800)]
remove extraneous html tag

11 years agoadd missing require
Tom Clegg [Mon, 14 Jan 2013 22:54:24 +0000 (14:54 -0800)]
add missing require

11 years agoimprove default nameservers list
Tom Clegg [Mon, 14 Jan 2013 22:51:57 +0000 (14:51 -0800)]
improve default nameservers list

11 years agoinclude nameservers in Node api responses
Tom Clegg [Mon, 14 Jan 2013 22:39:32 +0000 (14:39 -0800)]
include nameservers in Node api responses

11 years agoadd api template for pipeline_invocation
Tom Clegg [Mon, 14 Jan 2013 22:26:25 +0000 (14:26 -0800)]
add api template for pipeline_invocation

11 years agoadd pipeline_invocations html view
Tom Clegg [Mon, 14 Jan 2013 20:24:23 +0000 (12:24 -0800)]
add pipeline_invocations html view

11 years agoDeploy script fixes.
Ward Vandewege [Mon, 14 Jan 2013 20:12:31 +0000 (15:12 -0500)]
Deploy script fixes.

11 years agoeliminate extra layer {type: ...} in API responses
Tom Clegg [Sun, 13 Jan 2013 21:52:03 +0000 (13:52 -0800)]
eliminate extra layer {type: ...} in API responses

11 years agoadd api template for pipelines, collections, metadata
Tom Clegg [Sun, 13 Jan 2013 21:37:44 +0000 (13:37 -0800)]
add api template for pipelines, collections, metadata

11 years agoadd shared "common" template with kind and etag
Tom Clegg [Sun, 13 Jan 2013 21:34:33 +0000 (13:34 -0800)]
add shared "common" template with kind and etag

11 years agocopy config files and bundle install --local before deploy:assets:precompile
Tom Clegg [Sun, 13 Jan 2013 21:14:43 +0000 (13:14 -0800)]
copy config files and bundle install --local before deploy:assets:precompile

11 years agoadd status attribute to Node api response
Tom Clegg [Sun, 13 Jan 2013 20:19:06 +0000 (12:19 -0800)]
add status attribute to Node api response

11 years agoadd public/assets cache to .gitignore
Tom Clegg [Sun, 13 Jan 2013 20:18:32 +0000 (12:18 -0800)]
add public/assets cache to .gitignore

11 years agouse acts_as_api
Tom Clegg [Sun, 13 Jan 2013 20:17:44 +0000 (12:17 -0800)]
use acts_as_api

11 years agoin /nodes, click row to show info[]
Tom Clegg [Sun, 13 Jan 2013 19:35:20 +0000 (11:35 -0800)]
in /nodes, click row to show info[]

11 years agofix param name in node#ping
Tom Clegg [Fri, 11 Jan 2013 22:21:53 +0000 (14:21 -0800)]
fix param name in node#ping

11 years agoadd configurable compute node domain
Tom Clegg [Fri, 11 Jan 2013 22:13:35 +0000 (14:13 -0800)]
add configurable compute node domain

11 years agoupdate Gemfile.lock
Tom Clegg [Fri, 11 Jan 2013 22:08:54 +0000 (14:08 -0800)]
update Gemfile.lock

11 years agoload deploy/assets so assets get compiled at production
Tom Clegg [Fri, 11 Jan 2013 21:55:23 +0000 (13:55 -0800)]
load deploy/assets so assets get compiled at production

11 years agodo not show ec2-run command for instances already up
Tom Clegg [Fri, 11 Jan 2013 21:54:59 +0000 (13:54 -0800)]
do not show ec2-run command for instances already up

11 years agoupdate gems
Tom Clegg [Fri, 11 Jan 2013 21:15:26 +0000 (13:15 -0800)]
update gems

11 years agofix status name
Tom Clegg [Fri, 11 Jan 2013 20:54:06 +0000 (12:54 -0800)]
fix status name

11 years agoadd /nodes status page
Tom Clegg [Fri, 11 Jan 2013 18:27:04 +0000 (10:27 -0800)]
add /nodes status page

11 years agotweak stack trace log
Tom Clegg [Fri, 11 Jan 2013 07:47:53 +0000 (23:47 -0800)]
tweak stack trace log

11 years agoresume logging errors
Tom Clegg [Fri, 11 Jan 2013 07:41:42 +0000 (23:41 -0800)]
resume logging errors

11 years agoremove debug message
Tom Clegg [Fri, 11 Jan 2013 07:29:14 +0000 (23:29 -0800)]
remove debug message

11 years agoimprove error handling
Tom Clegg [Fri, 11 Jan 2013 07:27:10 +0000 (23:27 -0800)]
improve error handling

11 years agoreturn errors as json, improve handling of nested params
Tom Clegg [Fri, 11 Jan 2013 07:22:09 +0000 (23:22 -0800)]
return errors as json, improve handling of nested params

11 years agoimplement generic resource#update
Tom Clegg [Fri, 11 Jan 2013 06:25:40 +0000 (22:25 -0800)]
implement generic resource#update

11 years agofix some error message suppression in node#ping
Tom Clegg [Thu, 10 Jan 2013 22:26:55 +0000 (14:26 -0800)]
fix some error message suppression in node#ping

11 years agouse an after_update hook to keep DNS updated
Tom Clegg [Thu, 10 Jan 2013 20:48:05 +0000 (12:48 -0800)]
use an after_update hook to keep DNS updated

11 years agofix crash if no dnsmasq_conf_dir configured
Tom Clegg [Thu, 10 Jan 2013 20:39:23 +0000 (12:39 -0800)]
fix crash if no dnsmasq_conf_dir configured

11 years agoupdate dnsmasq database when node gets hostname
Tom Clegg [Thu, 10 Jan 2013 20:29:17 +0000 (12:29 -0800)]
update dnsmasq database when node gets hostname

11 years agoadd pipelineInvocation resource. refs #1357
Tom Clegg [Wed, 9 Jan 2013 22:20:00 +0000 (14:20 -0800)]
add pipelineInvocation resource. refs #1357

11 years agoadd pipeline resource. refs #1357
Tom Clegg [Wed, 9 Jan 2013 21:03:52 +0000 (13:03 -0800)]
add pipeline resource. refs #1357

11 years agoadd "find metadata by target kind + uuid" refs #1236, and generalize some code into...
Tom Clegg [Wed, 9 Jan 2013 02:14:50 +0000 (18:14 -0800)]
add "find metadata by target kind + uuid" refs #1236, and generalize some code into ApplicationController

11 years agosave Node even if ec2 create failed
Tom Clegg [Tue, 8 Jan 2013 09:06:02 +0000 (01:06 -0800)]
save Node even if ec2 create failed

11 years agoadd nodes#create and nodes#ping
Tom Clegg [Tue, 8 Jan 2013 08:59:39 +0000 (00:59 -0800)]
add nodes#create and nodes#ping

11 years agoOnly add rvm-capistrano in the development group
Ward Vandewege [Mon, 7 Jan 2013 20:12:32 +0000 (15:12 -0500)]
Only add rvm-capistrano in the development group

11 years agoadd collections.uuid
Tom Clegg [Mon, 7 Jan 2013 18:11:56 +0000 (10:11 -0800)]
add collections.uuid

11 years agouncamelcase params
Tom Clegg [Mon, 7 Jan 2013 18:09:44 +0000 (10:09 -0800)]
uncamelcase params

11 years agoDeploy script fixes
Ward Vandewege [Sun, 6 Jan 2013 02:34:29 +0000 (21:34 -0500)]
Deploy script fixes

11 years agomore initial metadata implementation
Tom Clegg [Sat, 5 Jan 2013 23:36:02 +0000 (15:36 -0800)]
more initial metadata implementation

11 years agorename created_by_client
Tom Clegg [Sat, 5 Jan 2013 22:47:26 +0000 (14:47 -0800)]
rename created_by_client

11 years agorename metadata_class
Tom Clegg [Sat, 5 Jan 2013 22:45:15 +0000 (14:45 -0800)]
rename metadata_class

11 years agoadd metadata resource
Tom Clegg [Sat, 5 Jan 2013 22:30:18 +0000 (14:30 -0800)]
add metadata resource

11 years agoMake sure to use the right git repo when deploying.
Ward Vandewege [Sat, 5 Jan 2013 20:51:37 +0000 (15:51 -0500)]
Make sure to use the right git repo when deploying.

11 years agoorvos-ify Collection part of api spec
Tom Clegg [Sat, 5 Jan 2013 02:20:19 +0000 (18:20 -0800)]
orvos-ify Collection part of api spec

11 years agodo not force ssl in dev environment
Tom Clegg [Sat, 5 Jan 2013 02:19:13 +0000 (18:19 -0800)]
do not force ssl in dev environment

11 years agoun-serialize data passed by google api client
Tom Clegg [Sat, 5 Jan 2013 02:17:37 +0000 (18:17 -0800)]
un-serialize data passed by google api client

11 years agoInitial commit
Ward Vandewege [Fri, 4 Jan 2013 01:18:03 +0000 (20:18 -0500)]
Initial commit