Lucas Di Pentima [Tue, 23 Oct 2018 15:50:29 +0000 (12:50 -0300)]
14259: Add method to keep client to request remote block copy via HEAD request.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 18:36:03 +0000 (15:36 -0300)]
Merge branch '13561-collection-versions-api'
Refs #13561
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 16:17:47 +0000 (13:17 -0300)]
13561: Move versioning code inside locking block.
Also, don't allow current_version_uuid updates on current versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 14:09:37 +0000 (11:09 -0300)]
13561: Fix validation & update related test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 10 Oct 2018 01:16:30 +0000 (22:16 -0300)]
13561: Refactor version creation & sync logic.
* Avoid overriding save! and move code to collection's callbacks.
* Use around_update to make the necessary actions and get a lock before saving.
* Arrange version creation and syncing actions so that they happen after the
current version's update.
* Update test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 20:07:44 +0000 (16:07 -0400)]
Merge branch '14199-copy-from-remote'
refs #14199
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 20:07:17 +0000 (16:07 -0400)]
14199: Reduce logging noise from azure test stubs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 19:56:26 +0000 (15:56 -0400)]
14199: Merge branch 'master' into 14199-copy-from-remote
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:20:38 +0000 (15:20 -0400)]
Merge branch '14196-api-v2-tokens' refs #14196
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:19:31 +0000 (15:19 -0400)]
14196: Revert debug change to Access-Control-Max-Age
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:16:09 +0000 (15:16 -0400)]
Merge branch '14274-factory-bot' closes #14274
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:36:52 +0000 (11:36 -0400)]
14199: Abandon processing sooner if client disconnects.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:24:44 +0000 (11:24 -0400)]
14199: Rename (*remoteResponseCacher)Flush -> Close.
Finalizing the caching writer is more like Close: it can only happen
once, and only after all Writes are done. Flush means something
different, especially in http.ResponseWriter context.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:19:16 +0000 (11:19 -0400)]
14199: Require "X-Keep-Signature: local[, ...]" to invoke signing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 18:09:30 +0000 (14:09 -0400)]
arvbox fix "can't write to /dev/stderr" message no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Fri, 5 Oct 2018 13:09:16 +0000 (10:09 -0300)]
Merge branch 'master' into 13561-collection-versions-api
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 01:36:05 +0000 (21:36 -0400)]
Merge branch '12690-12748-crunchstat-summary'
refs #12690
refs #12748
refs #13759
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 01:27:33 +0000 (21:27 -0400)]
14196: Multi-site search works with v2 tokens.
Also update workbench tests use v2 tokens.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Fri, 5 Oct 2018 00:49:25 +0000 (21:49 -0300)]
13561: Allow request old collection version by UUID.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 21:55:40 +0000 (18:55 -0300)]
13561: Ignore version & current_version_uuid parama on API create endpoint.
Also, updated discovery doc to include 'include_old_versions' param on index.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 18:54:18 +0000 (15:54 -0300)]
13561: Avoid permission links to be attached to past collection versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 18:22:31 +0000 (15:22 -0300)]
13561: Expand index API to include past versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 18:01:00 +0000 (14:01 -0400)]
14199: Fix deadlock in test suite.
If a KeepClient has been created using an API server address that is
no longer reachable, calling keepclient.RefreshServiceDiscovery() puts
the poll() goroutine into an endless retry loop, and a second call
never returns because ent.clear is never ready to receive.
Work around this in the pull worker tests by only refreshing services
from the API server actually being used, not on additional ones
referenced by previous test cases.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 14:15:22 +0000 (10:15 -0400)]
14199: Drop Vary response header for non-proxyable requests.
The X-Keep-Signature header is ignored for such requests anyway.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 05:27:19 +0000 (01:27 -0400)]
14199: Store data if X-Keep-Signature given in proxied GET/HEAD req.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 3 Oct 2018 20:38:30 +0000 (16:38 -0400)]
12690 & 12748: Read stats from arv-mount.txt
* Compute elapsed time for containers correctly
* Update tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 3 Oct 2018 20:11:38 +0000 (17:11 -0300)]
13561: Avoid collections.index to include old versions
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Wed, 3 Oct 2018 19:54:45 +0000 (15:54 -0400)]
14199: Refactor test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Wed, 3 Oct 2018 18:01:27 +0000 (14:01 -0400)]
Documentation tweaks. Point at Biostars as the forum to discuss Arvados
questions.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 17:56:16 +0000 (13:56 -0400)]
14274: Fix FactoryGirl deprication warning (renamed to FactoryBot)
Also fix "mocha/mini_test" -> "mocha/minitest" warning.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 3 Oct 2018 13:23:30 +0000 (09:23 -0400)]
Merge branch '13619-fed-object-list' closes #13619
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 21:14:59 +0000 (17:14 -0400)]
14196: Don't crash if element of params[:reader_tokens] is not a String
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 20:50:07 +0000 (16:50 -0400)]
13619: Move configuration options to arvados.Cluster.RequestLimits
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 18:05:51 +0000 (14:05 -0400)]
Merge branch '14201-exclude-home-project' closes #14201
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 2 Oct 2018 17:51:35 +0000 (14:51 -0300)]
13561: Save new version when preserve_version==true or config idle time is up.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 17:18:33 +0000 (13:18 -0400)]
14196: Login process returns v2 tokens
Unit/functional/integration tests now use v2 tokens by default.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 1 Oct 2018 20:13:24 +0000 (16:13 -0400)]
14201: Make exclude_home protected, deduplicate owner uuids
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 1 Oct 2018 19:48:51 +0000 (15:48 -0400)]
13619: Code cleanups
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 1 Oct 2018 19:43:50 +0000 (15:43 -0400)]
Merge branch '10181-incremental-log'
refs #10181
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 1 Oct 2018 17:41:44 +0000 (13:41 -0400)]
14201: add exclude_home_project to 'contents' endpoint
Adds tests and documentation.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Mon, 1 Oct 2018 17:32:12 +0000 (14:32 -0300)]
13561: Old collection version's modified_at reflects version's create time.
Don't update this field when syncing past versions' fields with selected
current updates.
Also, keep created_at the same as the current version when snapshotting.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 1 Oct 2018 17:28:57 +0000 (13:28 -0400)]
10181: Merge branch 'master' into 10181-incremental-log
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Sat, 29 Sep 2018 15:17:29 +0000 (11:17 -0400)]
a-c-r recognizes that http and https needs to be uploaded to keep
refs #13573
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Sat, 29 Sep 2018 13:20:24 +0000 (10:20 -0300)]
13561: Avoid old versions to be updated, with test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Fri, 28 Sep 2018 20:21:42 +0000 (16:21 -0400)]
10181: Restore container's ability to update its own runtime_status.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 28 Sep 2018 20:02:19 +0000 (16:02 -0400)]
13619: Document availability of federation features
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 28 Sep 2018 18:52:40 +0000 (14:52 -0400)]
13619: Test error reporting when one of the federates fails
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 28 Sep 2018 18:40:05 +0000 (14:40 -0400)]
10181: Don't set log collection is_trashed until final save.
Setting is_trashed prevents subsequent updates.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 28 Sep 2018 18:32:35 +0000 (14:32 -0400)]
13619: More tests for paging, error conditions
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 21:23:45 +0000 (17:23 -0400)]
13619: Test that "select" is passed through multi-object query
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 21:00:29 +0000 (17:00 -0400)]
13619: Polish error handling
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 27 Sep 2018 20:56:41 +0000 (16:56 -0400)]
10181: Fix up redundant error message.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 20:44:53 +0000 (16:44 -0400)]
13619: Support [uuid, =, ...], cleanups
Remove call to code that looks for cluster_id from json payload of
POST, the SDKs don't generate this (cluster_id goes in the URL query
string or form encoded).
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 18:52:22 +0000 (14:52 -0400)]
13619: Clean up, require count=none
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 16:29:35 +0000 (12:29 -0400)]
13619: MultiClusterQuery passes test
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 27 Sep 2018 14:53:22 +0000 (10:53 -0400)]
13619: Federated multi-object list wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 27 Sep 2018 14:03:40 +0000 (10:03 -0400)]
Merge branch '14236-delete-last-file'
fixes #14236
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 26 Sep 2018 20:19:16 +0000 (16:19 -0400)]
10181: Rename configs, add to API server config, support SIGUSR1.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 26 Sep 2018 16:13:06 +0000 (12:13 -0400)]
Add missing copyright headers.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Tue, 25 Sep 2018 21:44:56 +0000 (18:44 -0300)]
13561: Sync selected fields changes with older versions, with tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Tue, 25 Sep 2018 20:57:55 +0000 (16:57 -0400)]
10181: Fix overloaded Size method.
The method recently added to *dirnode is now TreeSize, rather than
overloading the non-recursive Size method of the inode interface.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 25 Sep 2018 18:51:32 +0000 (14:51 -0400)]
10181: Merge branch 'master' into 10181-incremental-log
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 25 Sep 2018 18:50:44 +0000 (14:50 -0400)]
10181: Keep CR logs synchronized with container logs while running.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Tue, 25 Sep 2018 15:22:05 +0000 (11:22 -0400)]
Merge branch '14197-federated-containers' refs #14197
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 24 Sep 2018 20:56:59 +0000 (16:56 -0400)]
14197: Another test checking uuid from federated container request.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 24 Sep 2018 20:53:40 +0000 (16:53 -0400)]
14197: Federated container request test tweaks
* Check uuid on created container request.
* Add test for bogus cluster id
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Mon, 24 Sep 2018 20:29:19 +0000 (17:29 -0300)]
13561: Lock row when saving a new collection version, update tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Sat, 22 Sep 2018 06:07:22 +0000 (02:07 -0400)]
10181: Fix race in MarshalManifest.
Ensure child nodes stay locked between sync and marshal. Otherwise
concurrent file writes can add new memSegments that can't be
marshaled.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 21 Sep 2018 20:48:01 +0000 (16:48 -0400)]
10181: Fix timing sensitivity in test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 21 Sep 2018 20:34:51 +0000 (16:34 -0400)]
10181: Load checkpoint configs from discovery doc if available.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 21 Sep 2018 20:23:58 +0000 (16:23 -0400)]
10181: Cleanup identifiers.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 21 Sep 2018 19:30:05 +0000 (15:30 -0400)]
10181: Update container log PDH after updating log collection.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 21 Sep 2018 19:23:18 +0000 (15:23 -0400)]
14197: Add cluster_id to discovery document for create method.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 20 Sep 2018 17:52:47 +0000 (13:52 -0400)]
10181: Permit dispatcher to update log while container is running.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 21 Sep 2018 18:25:34 +0000 (14:25 -0400)]
14197: Supports routing object create requests, with tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 21 Sep 2018 18:07:34 +0000 (14:07 -0400)]
14236: Fix regexp in test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Fri, 21 Sep 2018 16:31:08 +0000 (13:31 -0300)]
13561: Add missing copyright notices on migrations
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 21 Sep 2018 16:18:02 +0000 (13:18 -0300)]
13561: Add basic support for collection versioning at the model level.
* Update "unique name" index to ignore collection records that are old versions
* Add tests
* Update collection fixtures
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 18:57:30 +0000 (14:57 -0400)]
Merge branch '10865-legacy-jobs-api' closes #10865
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 18:55:31 +0000 (14:55 -0400)]
14197: Generalizing federated routing
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 18:13:28 +0000 (14:13 -0400)]
Merge branch '13493-document-federation' refs #13493
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 18:12:33 +0000 (14:12 -0400)]
Merge branch '14242-verify-manifest-pdh' closes #14242
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 17:55:19 +0000 (13:55 -0400)]
10865: Update documentation, replace disable_api_methods with enable_legacy_jobs_api
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Thu, 20 Sep 2018 17:53:51 +0000 (13:53 -0400)]
Sanitize how we get the rvm GPG key, and remove a dependency on the GPG
keyservers which are flakey.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 16:57:40 +0000 (12:57 -0400)]
10865: Add test for check_enable_legacy_jobs_api
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 20 Sep 2018 14:46:11 +0000 (10:46 -0400)]
14242: Add a test for manifest_text PDH checking
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 20 Sep 2018 05:04:52 +0000 (01:04 -0400)]
10181: Save log collection snapshots periodically during run.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 20 Sep 2018 04:59:35 +0000 (00:59 -0400)]
10181: Add Size method to arvados.CollectionFileSystem.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 19 Sep 2018 20:43:47 +0000 (16:43 -0400)]
14236: Don't omit empty manifest_text in update requests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 19 Sep 2018 20:22:58 +0000 (16:22 -0400)]
14236: Test deleting the last file in a collection.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 19 Sep 2018 20:15:47 +0000 (16:15 -0400)]
14197: Verify manifest text matches portable data hash that was requested
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Wed, 19 Sep 2018 20:06:50 +0000 (16:06 -0400)]
Fix package building - support modern versions of pip.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Wed, 19 Sep 2018 19:15:11 +0000 (15:15 -0400)]
10865: Fix query for empty jobs table
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 19 Sep 2018 18:52:54 +0000 (14:52 -0400)]
10865: Add enable_legacy_jobs_api configuration option
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 19 Sep 2018 13:35:08 +0000 (09:35 -0400)]
13493: Notes about cluster id, work in progress
Also add arvados federation diagram, copyright notice
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 18 Sep 2018 20:26:59 +0000 (16:26 -0400)]
13493: Federation documentation covers record retrieval, keep
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Tue, 18 Sep 2018 19:47:43 +0000 (15:47 -0400)]
Merge branch '13752-migrate-index-data'
refs #13752
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 18 Sep 2018 19:43:28 +0000 (15:43 -0400)]
13752: Merge branch 'master' into 13752-migrate-index-data
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 18 Sep 2018 19:42:06 +0000 (15:42 -0400)]
Merge branch '13994-proxy-remote'
refs #13994
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 18 Sep 2018 19:40:26 +0000 (15:40 -0400)]
13994: Merge branch 'master' into 13994-proxy-remote
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
projects / arvados.git / log