Ward Vandewege [Thu, 14 Jan 2016 16:01:04 +0000 (11:01 -0500)]
8189: Fix too-small page size in "fetch all pages" code.
Python SDK and workbench effectively default to the API server's
MAX_LIMIT when requesting a list of objects, in those cases where no
explicit limit is set in the client code.
Brett Smith [Thu, 31 Dec 2015 16:23:34 +0000 (11:23 -0500)]
8095: Make install guide bundle commands more consistent.
* Always instruct the user to use `sudo -u`. This prevents the
commands from generating cache files that the web server can't write
later.
* Always execute the command in the server's main directory. This
helps people run on automatic: if they leave a shell session open at
the API server directory, they can paste in a combination of Rails
console and script commands without `cd`ing around.
* Always give both RVM and non-RVM instructions. There might be a
good way to streamline this, e.g., by telling them to use rvmsudo
when available, but that can be a later optimization.
radhika [Mon, 4 Jan 2016 23:42:34 +0000 (18:42 -0500)]
7607: Update application layout tests; by default getting_started is disabled and hence the help menu will not include this option.
Also, added an additional test case for user with profile but no getting_started flag and expect the popup upon first login.
Brett Smith [Thu, 31 Dec 2015 17:08:17 +0000 (12:08 -0500)]
7957: Update Software Collections instructions in install guide.
* Document the process we currently follow on CentOS 6.
* Add a reference for RHEL instructions.
* Move noteboxes up, so people can follow the instructions
linearly ("enable Software Collections, then install the packages").
Brett Smith [Fri, 1 Jan 2016 20:26:22 +0000 (15:26 -0500)]
8014: Add #configure anchors to API server and Workbench install guides.
Package postinst scripts will use these to point people to the right
places in the documentation to read what steps they need to take
manually. The SSO server docs+package already follow this
convention. Refs #8014.
Brett Smith [Wed, 30 Dec 2015 23:53:12 +0000 (18:53 -0500)]
8082: Ensure consistent column widths in Workbench job banner.
4dcf4e849f242a929ce03b5d529e0e1a63fbaeb0 is the commit that introduced
the column inconsistencies. This is the smallest patch I could find
to address the issue. It may be less than ideal because it always
allocates a column to something that may not be displayed, but the
logic to keep track of column widths is already hairy and there are so
many conditions here that it stood to get a lot worse. Closes #8082.
Brett Smith [Wed, 30 Dec 2015 23:10:38 +0000 (18:10 -0500)]
8077: Tutorial suggests using the arvados/jobs Docker image.
This is all the hash script needs, and clusters are more likely to
have it than arvados/jobs-java-bwa-samtools, which is more of an
internal thing. Closes #8077.
Tom Clegg [Thu, 17 Dec 2015 06:07:32 +0000 (01:07 -0500)]
7884: Detect when a "download log" response has a JSON-encoded redirect
to keep-web, and convert it to POST to avoid a second redirect that
would be forbidden by SOP.
Peter Amstutz [Fri, 11 Dec 2015 19:49:01 +0000 (14:49 -0500)]
7939: Move daemonize to _run_standalone() after llfuse.init(), preserving open
file descriptors. Add tests for various error conditions that can prevent
successful mount.
Peter Amstutz [Thu, 10 Dec 2015 21:37:29 +0000 (16:37 -0500)]
6429: Improve variable names in tests a bit. Default priority of container
request to nil and check for nil priority. Complete/cancelled container
finalizes requests that created it and sets priority 0 on requests that it
created itself.
Peter Amstutz [Wed, 9 Dec 2015 20:06:46 +0000 (15:06 -0500)]
6429: Use text instead of string for longer API fields.
Move "resolve" from Container to ContainerRequest.
Simplify state transition checking.
Improve formatting of error messages.
Rename workbench models to be singular.
Remove bogus factory files.
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