Lucas Di Pentima [Mon, 13 May 2019 12:25:01 +0000 (09:25 -0300)]
Merge branch 'master' into 14988-wb-rails5-upgrade
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Fri, 10 May 2019 20:36:39 +0000 (16:36 -0400)]
Log if client hangs up while waiting for unix volume Serialize lock.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 10 May 2019 20:07:47 +0000 (16:07 -0400)]
Remove extra \n from log.Printf formats
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Thu, 9 May 2019 20:57:08 +0000 (16:57 -0400)]
Merge branch '15061-fed-login' refs #15061
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 9 May 2019 19:27:07 +0000 (15:27 -0400)]
15061: Add missing file
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 7 May 2019 22:00:57 +0000 (18:00 -0400)]
15061: Implement admin variant of user merge by uuid
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 7 May 2019 20:31:21 +0000 (16:31 -0400)]
15061: API support for linking local account to remote user
Adds page to login process to redirect user to log in to home cluster.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 6 May 2019 19:35:42 +0000 (15:35 -0400)]
15061: Correctly filter out "*" from RemoteClusters
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 9 May 2019 14:37:36 +0000 (10:37 -0400)]
Pin pykka < 2 for nodemanager no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 8 May 2019 21:50:26 +0000 (18:50 -0300)]
14988: Fixes merge conflict
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Ward Vandewege [Wed, 8 May 2019 20:39:17 +0000 (16:39 -0400)]
Fix unit error in the node manager documentation for EC2.
refs #15199
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Fri, 3 May 2019 20:21:06 +0000 (16:21 -0400)]
arvbox crunch-run and certificate fixes
arvbox crunch-run change to -container-enable-networking=default
Previously was "always" which causes CWL tests that checked that
networking was disabled to fail.
arvbox root-cert creates file with .crt instead of .pem, because
that's the file extension update-ca-certificates looks for.
Add cluster id and timestamp to arvbox test certificate common name to
prevents collisions on the certificate subject.
Arvbox sets trusted api_client for workbench2.
refs #15028 refs #15061
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 8 May 2019 19:25:57 +0000 (16:25 -0300)]
Merge branch 'master' into 14988-wb-rails5-upgrade
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 8 May 2019 13:10:48 +0000 (10:10 -0300)]
14988: Fixes exception raising due to a change in rails5 behavior.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 8 May 2019 13:09:58 +0000 (10:09 -0300)]
14988: Adds empty subdir to test/ as it's required by rails.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 7 May 2019 20:26:33 +0000 (17:26 -0300)]
14988: Fixes .dup method behavior on ArvadosBase.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Tue, 7 May 2019 15:55:11 +0000 (11:55 -0400)]
Merge branch '15112-rerun-containers' refs #15112
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 7 May 2019 13:53:24 +0000 (10:53 -0300)]
14988: Fixes exception raising when logging out.
See: https://stackoverflow.com/a/
41266746
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 20:56:00 +0000 (17:56 -0300)]
14988: Disables wiselinks gem. Testing if it's really needed.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 20:52:20 +0000 (17:52 -0300)]
14988: Removes deprecation warning about rendering nothing.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 20:12:30 +0000 (17:12 -0300)]
14988: Fixes anonymous config & token usage issues on tests.
After calling post/get it seems that the token is reset, so on tests with
multiple controller/api calls there were some problems with authentication.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 18:08:25 +0000 (15:08 -0300)]
14988: Adds missing create!() method to ArvadosBase.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 15:16:54 +0000 (12:16 -0300)]
14988: Fixes CSS syntax error on Jobs controller tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 15:07:12 +0000 (12:07 -0300)]
14988: Fixes CSS syntax issue.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 14:30:49 +0000 (11:30 -0300)]
14988: Fixes unit test by adding 'x-python' type to the preview-allowed list.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 6 May 2019 12:23:36 +0000 (09:23 -0300)]
14988: Fixes functionals tests (WIP)
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 3 May 2019 15:40:43 +0000 (11:40 -0400)]
Fix mistake setting container_count_max from wrong config parameter
refs #13996
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 2 May 2019 14:13:26 +0000 (10:13 -0400)]
Merge branch '15164-cr-finalize-lock' closes #15164
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 2 May 2019 13:22:12 +0000 (09:22 -0400)]
15112: log root user. log progress.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 1 May 2019 20:39:06 +0000 (16:39 -0400)]
15112: Rename since it doesn't rerun anything
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 1 May 2019 20:30:31 +0000 (16:30 -0400)]
15112: Don't submit anything, just produce a csv file with results
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Wed, 1 May 2019 20:18:51 +0000 (16:18 -0400)]
Fix typo.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Morris [Wed, 1 May 2019 18:56:35 +0000 (14:56 -0400)]
Fix debug setup accidentally committed.
refs #14670
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Peter Amstutz [Tue, 30 Apr 2019 22:06:54 +0000 (18:06 -0400)]
15112: Script to re-run containers
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 30 Apr 2019 19:55:35 +0000 (16:55 -0300)]
Merge branch '15161-config-check-rake-fix'
Refs #15161
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 30 Apr 2019 16:52:39 +0000 (13:52 -0300)]
15161: Re-adds API's config:check rake task (as a noop)
The unified rails postinst scripts assume that this task is always available.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Tue, 30 Apr 2019 15:53:01 +0000 (11:53 -0400)]
15164: Add locking between container completion and reuse
Addresses race condition between container completion and container
reuse. Without this locking, a container request can resolve and
attempt to reuse a container which is concurrently being completed,
resulting in a race condition that results in the container request
never being finalized.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 30 Apr 2019 15:43:04 +0000 (12:43 -0300)]
Fixes test running call on API server to be able to run single test files.
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 29 Apr 2019 14:19:21 +0000 (11:19 -0300)]
Merge branch 'api-tests-summary-fix'
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 26 Apr 2019 23:34:07 +0000 (20:34 -0300)]
Fixes API Server's test runner to print failures summary at the end of the run.
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 26 Apr 2019 21:57:22 +0000 (18:57 -0300)]
14988: Makes test runner defer the test failures summary.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 26 Apr 2019 20:56:23 +0000 (17:56 -0300)]
14988: Refactors ArvadosBase class to not subclass ActiveRecord.
Unit tests passing ok. The nulldb gem is still needed to avoid rails
try to run db reset/migrations.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Fri, 26 Apr 2019 20:39:28 +0000 (16:39 -0400)]
Merge branch '15148-lost-collection-pdh'
refs #15148
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 26 Apr 2019 20:06:39 +0000 (16:06 -0400)]
15148: Include list of affected PDHs in LostBlocksFile.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 26 Apr 2019 17:30:20 +0000 (13:30 -0400)]
Merge branch '14399-azure-list-retry'
fixes #14399
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 25 Apr 2019 17:54:40 +0000 (13:54 -0400)]
14399: Don't insert error text in the middle of an index response.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 25 Apr 2019 17:54:03 +0000 (13:54 -0400)]
14399: Retry Azure ListBlobs call after 503 errors.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Nico Cesar [Fri, 26 Apr 2019 16:07:38 +0000 (12:07 -0400)]
Typo in one of the parameters
no issue #
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Tom Clegg [Wed, 24 Apr 2019 20:42:06 +0000 (16:42 -0400)]
Merge branch '15112-save-lost-blocks-file'
refs #15112
refs #15148
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 24 Apr 2019 20:30:00 +0000 (16:30 -0400)]
15112: Remove tempfile only if still locked (not renamed).
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 24 Apr 2019 20:23:56 +0000 (16:23 -0400)]
15112: Fix fd leak on error.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 24 Apr 2019 19:22:44 +0000 (15:22 -0400)]
15112: Add config option to save list of lost blocks to a file.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Morris [Wed, 24 Apr 2019 16:20:58 +0000 (12:20 -0400)]
Merge branch '14627-crunchstat-summary-elapsed'
Fixes #14627
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Mon, 18 Mar 2019 22:48:33 +0000 (18:48 -0400)]
Fix elapsed time calculation.
refs #14627
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Wed, 24 Apr 2019 16:19:12 +0000 (12:19 -0400)]
Merge branch '14939-crunchstat-summary-python3-fixup'
Fixes #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Mon, 22 Apr 2019 19:34:39 +0000 (15:34 -0400)]
Fix iteration order dependency.
Causes tests to fail in Python 3.5, but not Python 3.7 due to dependency on iteration order of dicts.
Refs #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Wed, 27 Mar 2019 17:19:24 +0000 (13:19 -0400)]
Add crunchstat-summary Python 3 to all tests.
Refs #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Peter Amstutz [Wed, 24 Apr 2019 15:49:33 +0000 (11:49 -0400)]
Add gradle.properties with empty ossrhUsername/Password refs #14670
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Wed, 24 Apr 2019 15:36:57 +0000 (11:36 -0400)]
Make the doc Rakefile a little more helpful when it's missing javadoc
dependencies.
refs #14670
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Tue, 23 Apr 2019 17:49:25 +0000 (13:49 -0400)]
Merge branch '14670-new-java-sdk-docs' refs #14670
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 23 Apr 2019 13:47:16 +0000 (10:47 -0300)]
Merge branch 'rails5-schema-env-data'
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 23 Apr 2019 13:29:46 +0000 (10:29 -0300)]
Adjust the environment setting command to be consistent with other calls.
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 22 Apr 2019 20:45:27 +0000 (17:45 -0300)]
Set up "test" environment before dropping the rails database.
After the Rails 5 upgrade, this is necessary to avoid install step failures
when running tests having a pre-rails5 database already created.
No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Mon, 22 Apr 2019 20:19:51 +0000 (16:19 -0400)]
Handle unrecognized uuid_prefix of remote host refs #13996
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Mon, 22 Apr 2019 18:56:44 +0000 (15:56 -0300)]
14988: More deprecation warning fixes on functional tests.
There's just one pending from the wiselinks gem. Will defer fixing it because
it's not conclusive that wiselinks is compatible with rails >= 5.0 yet.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 18:45:31 +0000 (14:45 -0400)]
Update structure.sql for last migration.
refs #15112
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 22 Apr 2019 18:01:05 +0000 (14:01 -0400)]
14670: Update documentation with example gradle file
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 22 Apr 2019 17:38:14 +0000 (13:38 -0400)]
Merge branch '15119-api-config-fixes'
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
refs #13996
refs #15119
Peter Amstutz [Mon, 22 Apr 2019 17:33:58 +0000 (13:33 -0400)]
15119: Fixes for Workbench1.ExternalURL and Controller.ExternalURL
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Mon, 22 Apr 2019 17:03:22 +0000 (14:03 -0300)]
14988: Removes almost all pending deprecated warnings on functional tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Fernando Monserrat [Mon, 22 Apr 2019 15:56:03 +0000 (12:56 -0300)]
issue #15041 Split test and upload. uploadArchives passed as parameter to publish artifact \nArvados-DCO-1.1-Signed-off-by: Fernando Monserrat <fmonserrat@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 15:40:53 +0000 (11:40 -0400)]
Merge branch '15112-migration'
refs #15112
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 15:29:31 +0000 (11:29 -0400)]
15112: Fill in missing modified_at values from before #14595.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 14:55:28 +0000 (10:55 -0400)]
Merge branch '15112-dont-trash-needed-replica'
refs #15112
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 14:50:59 +0000 (10:50 -0400)]
15112: Note rationale for non-obvious paging approach.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 13:30:29 +0000 (09:30 -0400)]
15112: Add test.
This tests for a bug that was already fixed in #14595, but without
noticing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 07:06:18 +0000 (03:06 -0400)]
15112: Refuse to run if modified_at column has any nulls.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 00:25:28 +0000 (20:25 -0400)]
15112: Stop processing collections on first error.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 00:24:40 +0000 (20:24 -0400)]
15112: Fix duplicate default.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 00:24:12 +0000 (20:24 -0400)]
15112: Error out right away on unusable manifest.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 00:23:16 +0000 (20:23 -0400)]
15112: Fix log check in test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 00:14:16 +0000 (20:14 -0400)]
15112: Show #collections and class->#desired map in dump.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Sun, 21 Apr 2019 00:32:54 +0000 (20:32 -0400)]
15112: Test multiple volumes with same device IDs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Sun, 21 Apr 2019 00:29:42 +0000 (20:29 -0400)]
15112: Fix mount IDs in test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Sun, 21 Apr 2019 00:26:44 +0000 (20:26 -0400)]
15112: Use FieldLogger interface so tests can use ctxlog.TestLogger.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Sat, 20 Apr 2019 21:22:41 +0000 (17:22 -0400)]
15112: Report volumes without replicas as "none" in -dump output.
...instead of reporting as "stay" or "none" depending on
whether *other* volumes have replicas.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Fri, 19 Apr 2019 21:41:08 +0000 (18:41 -0300)]
14988: Fixes deprecation warnings on controller tests (WIP)
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 19 Apr 2019 21:23:48 +0000 (17:23 -0400)]
14670: Add an example page
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Eric Biagiotti [Fri, 19 Apr 2019 20:32:05 +0000 (16:32 -0400)]
Merge branch '14723-cwl-multiple-file-targets'
refs #14723
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Lucas Di Pentima [Fri, 19 Apr 2019 20:29:47 +0000 (17:29 -0300)]
14988: Uses wiselinks gem fork to fix some deprecation warnings.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 19 Apr 2019 18:48:23 +0000 (14:48 -0400)]
Merge, don't replace RemoteClusters refs #13996
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 19 Apr 2019 16:13:11 +0000 (12:13 -0400)]
Set secrets.secret_key_base refs #13996
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Eric Biagiotti [Fri, 19 Apr 2019 14:59:24 +0000 (10:59 -0400)]
Merge branch 'master' into 14723-cwl-multiple-file-targets
refs #14723
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Eric Biagiotti [Fri, 19 Apr 2019 14:59:06 +0000 (10:59 -0400)]
14723: Adds comments for the changes to StagingPathMapper
Also improves executor exception handling mapping logic.
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Peter Amstutz [Thu, 18 Apr 2019 21:57:54 +0000 (17:57 -0400)]
14670: Skip test (fixed)
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Apr 2019 21:50:02 +0000 (17:50 -0400)]
14670: Ignore failing test
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Apr 2019 21:44:21 +0000 (17:44 -0400)]
14670: Fix run-tests. Skip failing test.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Apr 2019 19:28:50 +0000 (15:28 -0400)]
Merge branch '13996-new-api-config' refs #13996
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Eric Biagiotti [Thu, 18 Apr 2019 18:41:29 +0000 (14:41 -0400)]
Merge branch '15002-cancel-completed-container'
refs #15002
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Eric Biagiotti [Fri, 12 Apr 2019 13:55:33 +0000 (09:55 -0400)]
15002: Adds admin feature for cancelling completed containers
- Adds documentation and fixed dispatchcloud container test
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
projects / arvados.git / log