arvados.git
8 months ago20933: Handle errors when calling arvados-cwl-runner
Peter Amstutz [Thu, 5 Oct 2023 19:52:10 +0000 (15:52 -0400)]
20933: Handle errors when calling arvados-cwl-runner

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20933: Add --print-keep-deps test
Peter Amstutz [Thu, 5 Oct 2023 13:39:51 +0000 (09:39 -0400)]
20933: Add --print-keep-deps test

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20933: Fix tests
Peter Amstutz [Wed, 4 Oct 2023 21:50:05 +0000 (17:50 -0400)]
20933: Fix tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20933: Copies collections reported by a-c-r
Peter Amstutz [Thu, 7 Sep 2023 20:43:45 +0000 (16:43 -0400)]
20933: Copies collections reported by a-c-r

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20933: Use acrContainerImage where available
Peter Amstutz [Thu, 7 Sep 2023 20:30:14 +0000 (16:30 -0400)]
20933: Use acrContainerImage where available

also refs #20592

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20933: Adding --print-keep-deps to assist arv-copy
Peter Amstutz [Thu, 7 Sep 2023 18:37:05 +0000 (14:37 -0400)]
20933: Adding --print-keep-deps to assist arv-copy

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago15768: integration tests pass locally Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa...
Lisa Knox [Wed, 11 Oct 2023 21:05:11 +0000 (17:05 -0400)]
15768: integration tests pass locally Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: fixed commands.js so int tests run Arvados-DCO-1.1-Signed-off-by: Lisa Knox...
Lisa Knox [Wed, 11 Oct 2023 19:12:03 +0000 (15:12 -0400)]
15768: fixed commands.js so int tests run Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago19821: Bugfix type declarations for compatibility with Python<3.9
Brett Smith [Wed, 11 Oct 2023 16:40:55 +0000 (12:40 -0400)]
19821: Bugfix type declarations for compatibility with Python<3.9

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago19821: Improve consistency of Properties type
Brett Smith [Wed, 11 Oct 2023 16:40:18 +0000 (12:40 -0400)]
19821: Improve consistency of Properties type

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago19821: Document the arvados.collection module
Brett Smith [Tue, 10 Oct 2023 20:24:12 +0000 (16:24 -0400)]
19821: Document the arvados.collection module

* Add docstrings and type signatures to all public methods.

* Mark all deprecated classes and methods. Move them to the bottom of
  the module for better organization of web documentation.

* Mark all internal classes and methods.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago15768: restored error snackbar on copy collection 422 Arvados-DCO-1.1-Signed-off...
Lisa Knox [Wed, 11 Oct 2023 15:24:42 +0000 (11:24 -0400)]
15768: restored error snackbar on copy collection 422 Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: fixed rename of single collection bug Arvados-DCO-1.1-Signed-off-by: Lisa...
Lisa Knox [Wed, 11 Oct 2023 14:32:56 +0000 (10:32 -0400)]
15768: fixed rename of single collection bug Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoClose span
Peter Amstutz [Wed, 11 Oct 2023 14:25:41 +0000 (10:25 -0400)]
Close span

refs #20937

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoRemove duplicated ~$
Peter Amstutz [Wed, 11 Oct 2023 14:16:44 +0000 (10:16 -0400)]
Remove duplicated ~$

refs #20937

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago15768: removed vestigial imports Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox...
Lisa Knox [Wed, 11 Oct 2023 13:37:42 +0000 (09:37 -0400)]
15768: removed vestigial imports Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: made separate file for project panel action binding Arvados-DCO-1.1-Signed...
Lisa Knox [Wed, 11 Oct 2023 13:21:05 +0000 (09:21 -0400)]
15768: made separate file for project panel action binding Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoMerge branch '20937-arv-copy-http' refs #20937
Peter Amstutz [Wed, 11 Oct 2023 13:20:29 +0000 (09:20 -0400)]
Merge branch '20937-arv-copy-http' refs #20937

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Simplify use of logger.error
Peter Amstutz [Wed, 11 Oct 2023 13:19:24 +0000 (09:19 -0400)]
20937: Simplify use of logger.error

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago15768: unit tests pass again Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox...
Lisa Knox [Tue, 10 Oct 2023 21:01:06 +0000 (17:01 -0400)]
15768: unit tests pass again Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: merge cleanup Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Tue, 10 Oct 2023 19:31:09 +0000 (15:31 -0400)]
15768: merge cleanup Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago20937: Improve error handling 20937-arv-copy-http
Peter Amstutz [Tue, 10 Oct 2023 17:49:15 +0000 (13:49 -0400)]
20937: Improve error handling

Also clean up docs a bit

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch 'main' into 15768-multi-select-operations Arvados-DCO-1.1-Signed-off...
Lisa Knox [Tue, 10 Oct 2023 15:46:28 +0000 (11:46 -0400)]
Merge branch 'main' into 15768-multi-select-operations Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoMerge branch '20949-wb-redirects-improvements'. Closes #20949
Lucas Di Pentima [Tue, 10 Oct 2023 15:29:34 +0000 (12:29 -0300)]
Merge branch '20949-wb-redirects-improvements'. Closes #20949

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago21055: Replaces %w with %v for error logging. 21055-arvados-server-install-fix
Lucas Di Pentima [Tue, 10 Oct 2023 15:17:02 +0000 (12:17 -0300)]
21055: Replaces %w with %v for error logging.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago21055: Don't exit when failing to set inotify.max_user_watches.
Lucas Di Pentima [Tue, 10 Oct 2023 14:45:29 +0000 (11:45 -0300)]
21055: Don't exit when failing to set inotify.max_user_watches.

Docker containers mount procfs as read-only and inherit this setting from
their host: https://github.com/coder/code-server/issues/628

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago19140: Adds admin documentation about service account management.
Lucas Di Pentima [Mon, 9 Oct 2023 14:42:44 +0000 (11:42 -0300)]
19140: Adds admin documentation about service account management.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago19140: Adds TOC to User Management Admin doc page.
Lucas Di Pentima [Fri, 6 Oct 2023 20:57:22 +0000 (17:57 -0300)]
19140: Adds TOC to User Management Admin doc page.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago20949: Adds query string based redirections from wb1's actions controller. 20949-wb-redirects-improvements
Lucas Di Pentima [Fri, 6 Oct 2023 17:23:20 +0000 (14:23 -0300)]
20949: Adds query string based redirections from wb1's actions controller.

Matches '/actions?uuid=X' URLs and redirects to an appropriate WB2 URL.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago20825: Fix zipp dependency, add missing file
Peter Amstutz [Fri, 6 Oct 2023 15:25:35 +0000 (11:25 -0400)]
20825: Fix zipp dependency, add missing file

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Update documentation
Peter Amstutz [Fri, 6 Oct 2023 14:42:11 +0000 (10:42 -0400)]
20937: Update documentation

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20300: Fix unused var.
Tom Clegg [Fri, 6 Oct 2023 14:13:39 +0000 (10:13 -0400)]
20300: Fix unused var.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20937: Return same tuple consistently from http_to_keep
Peter Amstutz [Fri, 6 Oct 2023 14:01:40 +0000 (10:01 -0400)]
20937: Return same tuple consistently from http_to_keep

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20891-incorrect-navigate-to-group'
Lisa Knox [Fri, 6 Oct 2023 13:12:11 +0000 (09:12 -0400)]
Merge branch '20891-incorrect-navigate-to-group'

closes #20891

Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago20825: Allow arvwf: in 'run'
Peter Amstutz [Tue, 12 Sep 2023 13:32:30 +0000 (09:32 -0400)]
20825: Allow arvwf: in 'run'

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Make SeparateRunner reusable
Peter Amstutz [Tue, 12 Sep 2023 01:49:55 +0000 (21:49 -0400)]
20825: Make SeparateRunner reusable

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Remove print statement
Peter Amstutz [Tue, 12 Sep 2023 01:44:48 +0000 (21:44 -0400)]
20825: Remove print statement

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Add runnerProcessName
Peter Amstutz [Tue, 12 Sep 2023 01:38:13 +0000 (21:38 -0400)]
20825: Add runnerProcessName

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Fix edge case producing incorrect error
Peter Amstutz [Tue, 12 Sep 2023 01:25:31 +0000 (21:25 -0400)]
20825: Fix edge case producing incorrect error

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Fix git_info
Peter Amstutz [Tue, 12 Sep 2023 01:09:14 +0000 (21:09 -0400)]
20825: Fix git_info

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: Fixing invocation
Peter Amstutz [Tue, 12 Sep 2023 00:58:18 +0000 (20:58 -0400)]
20825: Fixing invocation

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20825: arv:SeparateRunner first try
Peter Amstutz [Tue, 12 Sep 2023 00:42:55 +0000 (20:42 -0400)]
20825: arv:SeparateRunner first try

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: fix deadlock with duplicated blocks
Peter Amstutz [Mon, 11 Sep 2023 20:45:44 +0000 (16:45 -0400)]
20937: fix deadlock with duplicated blocks

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Set limit on 'put' queue
Peter Amstutz [Mon, 11 Sep 2023 20:10:08 +0000 (16:10 -0400)]
20937: Set limit on 'put' queue

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Fix in -> is typo
Peter Amstutz [Mon, 11 Sep 2023 19:57:53 +0000 (15:57 -0400)]
20937: Fix in -> is typo

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Handle None result
Peter Amstutz [Mon, 11 Sep 2023 19:56:18 +0000 (15:56 -0400)]
20937: Handle None result

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Fix pathmapper use of http_to_keep
Peter Amstutz [Mon, 11 Sep 2023 17:02:42 +0000 (13:02 -0400)]
20937: Fix pathmapper use of http_to_keep

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Add error handling to threaded collection copy
Peter Amstutz [Mon, 11 Sep 2023 14:02:26 +0000 (10:02 -0400)]
20937: Add error handling to threaded collection copy

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Better handling of repeated blocks
Peter Amstutz [Fri, 8 Sep 2023 02:46:44 +0000 (22:46 -0400)]
20937: Better handling of repeated blocks

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Fix progress writer
Peter Amstutz [Fri, 8 Sep 2023 02:33:51 +0000 (22:33 -0400)]
20937: Fix progress writer

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Parallel collection copy
Peter Amstutz [Thu, 5 Oct 2023 19:14:31 +0000 (15:14 -0400)]
20937: Parallel collection copy

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20937: Add http import capability to arv-copy
Peter Amstutz [Fri, 8 Sep 2023 01:52:14 +0000 (21:52 -0400)]
20937: Add http import capability to arv-copy

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20891: refined group narrowing Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox...
Lisa Knox [Thu, 5 Oct 2023 16:11:28 +0000 (12:11 -0400)]
20891: refined group narrowing Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoMerge branch 'main' from workbench2.git
Tom Clegg [Thu, 5 Oct 2023 15:46:31 +0000 (11:46 -0400)]
Merge branch 'main' from workbench2.git

refs #18874

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoMerge branch '21002-restore-banner-adjust-width'
Lisa Knox [Thu, 5 Oct 2023 14:45:32 +0000 (10:45 -0400)]
Merge branch '21002-restore-banner-adjust-width'

closes #21002

Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago20300: Fix crash on empty Content-Type header.
Tom Clegg [Thu, 5 Oct 2023 13:48:29 +0000 (09:48 -0400)]
20300: Fix crash on empty Content-Type header.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago15768: adjusted project spec Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox...
Lisa Knox [Wed, 4 Oct 2023 20:07:51 +0000 (16:07 -0400)]
15768: adjusted project spec Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: restored search spec to original Arvados-DCO-1.1-Signed-off-by: Lisa Knox...
Lisa Knox [Wed, 4 Oct 2023 17:42:27 +0000 (13:42 -0400)]
15768: restored search spec to original Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: cleanup Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Wed, 4 Oct 2023 17:31:51 +0000 (13:31 -0400)]
15768: cleanup Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: fixed 422 handling on untrash Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa...
Lisa Knox [Wed, 4 Oct 2023 16:19:43 +0000 (12:19 -0400)]
15768: fixed 422 handling on untrash Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago20300: Update test.
Tom Clegg [Wed, 4 Oct 2023 15:45:09 +0000 (11:45 -0400)]
20300: Update test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20300: Fix controller-to-railsapi callback usage.
Tom Clegg [Wed, 4 Oct 2023 15:07:20 +0000 (11:07 -0400)]
20300: Fix controller-to-railsapi callback usage.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago15768: narrowed 422 handling on copyCollection Arvados-DCO-1.1-Signed-off-by: Lisa...
Lisa Knox [Wed, 4 Oct 2023 14:21:56 +0000 (10:21 -0400)]
15768: narrowed 422 handling on copyCollection Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoMerge branch '21033-wb2-dependency-upgrades'. Closes #21033
Lucas Di Pentima [Tue, 3 Oct 2023 20:52:35 +0000 (17:52 -0300)]
Merge branch '21033-wb2-dependency-upgrades'. Closes #21033

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago21033: Applies dependency upgrades.
Lucas Di Pentima [Tue, 3 Oct 2023 18:59:23 +0000 (15:59 -0300)]
21033: Applies dependency upgrades.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago15768: removed vestigial foreach loops in project-actions Arvados-DCO-1.1-Signed...
Lisa Knox [Tue, 3 Oct 2023 18:05:37 +0000 (14:05 -0400)]
15768: removed vestigial foreach loops in project-actions Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: changed navigateTo to take a string only Arvados-DCO-1.1-Signed-off-by: Lisa...
Lisa Knox [Tue, 3 Oct 2023 17:28:15 +0000 (13:28 -0400)]
15768: changed navigateTo to take a string only Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: removed submit func from ms popover Arvados-DCO-1.1-Signed-off-by: Lisa Knox...
Lisa Knox [Tue, 3 Oct 2023 14:02:15 +0000 (10:02 -0400)]
15768: removed submit func from ms popover Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months agoMerge branch '20990-name-btree' refs #20990
Peter Amstutz [Tue, 3 Oct 2023 13:54:30 +0000 (09:54 -0400)]
Merge branch '20990-name-btree' refs #20990

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago15768: uncommented image preview test spec Arvados-DCO-1.1-Signed-off-by: Lisa Knox...
Lisa Knox [Tue, 3 Oct 2023 13:43:46 +0000 (09:43 -0400)]
15768: uncommented image preview test spec Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: fixed waitfordom args in collection spec Arvados-DCO-1.1-Signed-off-by: Lisa...
Lisa Knox [Tue, 3 Oct 2023 13:38:51 +0000 (09:38 -0400)]
15768: fixed waitfordom args in collection spec Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago15768: fixed mstoolbar button ripple Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa...
Lisa Knox [Tue, 3 Oct 2023 13:29:36 +0000 (09:29 -0400)]
15768: fixed mstoolbar button ripple Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>

8 months ago21030: Use a CTE instead of temporary table for trash and frozen
Peter Amstutz [Mon, 2 Oct 2023 21:09:05 +0000 (17:09 -0400)]
21030: Use a CTE instead of temporary table for trash and frozen

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago21030: Use a CTE instead of temporary table for update_permissions
Peter Amstutz [Mon, 2 Oct 2023 20:37:53 +0000 (16:37 -0400)]
21030: Use a CTE instead of temporary table for update_permissions

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

9 months ago21028: Build Ruby from source on rocky8
Brett Smith [Fri, 29 Sep 2023 22:48:41 +0000 (18:48 -0400)]
21028: Build Ruby from source on rocky8

Same rationale as fe8da34676be7c6fbb1042fcfcabee19bfa424d0.

Refs #21028.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months ago20300: Add back /logout stub.
Tom Clegg [Fri, 29 Sep 2023 21:06:26 +0000 (17:06 -0400)]
20300: Add back /logout stub.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months agoNote that groups/contents API can accept a user UUID
Brett Smith [Fri, 29 Sep 2023 19:35:21 +0000 (15:35 -0400)]
Note that groups/contents API can accept a user UUID

This is very helpful for generalizing project walk code and I don't
think it's documented anywhere.

No issue #.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months ago21028: Build Ruby from source on rocky8
Brett Smith [Fri, 29 Sep 2023 19:23:56 +0000 (15:23 -0400)]
21028: Build Ruby from source on rocky8

Without this, RVM downloads a binary Ruby with a bunch of configuration
options turned on. This can lead to problems building extensions when
Ruby thinks a certain feature is supported but our Docker image doesn't
have the headers to support it. Right now we're seeing that in the zlib
gem: it has extra code to turn on when Ruby supports Valgrind, but we
don't have the Valgrind headers necessary to build that code.

Closes #21028.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months ago20878: Bugfix missing variable sigil
Brett Smith [Fri, 29 Sep 2023 19:22:13 +0000 (15:22 -0400)]
20878: Bugfix missing variable sigil

Without this, the test compared against the constant string "TARGET" and
never tried to reuse built RPMs.

Refs #20878.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months agoMerge branch '18874-merge-wb2'
Tom Clegg [Fri, 29 Sep 2023 17:46:58 +0000 (13:46 -0400)]
Merge branch '18874-merge-wb2'

refs #18874

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months agoMerge branch '19818-api-pydoc'
Brett Smith [Fri, 29 Sep 2023 15:28:50 +0000 (11:28 -0400)]
Merge branch '19818-api-pydoc'

Closes #19818.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months ago20300: Remove obsolete auth code.
Tom Clegg [Fri, 29 Sep 2023 14:11:44 +0000 (10:11 -0400)]
20300: Remove obsolete auth code.

The browser-facing parts are now handled by controller.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20932: Update API index for Workbench 2 default
Brett Smith [Fri, 29 Sep 2023 14:21:50 +0000 (10:21 -0400)]
20932: Update API index for Workbench 2 default

* Just call it "Workbench," not "Workbench 2" or "new Workbench."
* Remove reference to Workbench 1 Advanced tab.

Refs #20932.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

9 months ago20300: Fix flaky test.
Tom Clegg [Tue, 26 Sep 2023 13:07:51 +0000 (09:07 -0400)]
20300: Fix flaky test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Fix login callback redirect.
Tom Clegg [Mon, 25 Sep 2023 21:10:38 +0000 (17:10 -0400)]
20300: Fix login callback redirect.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Use Rails 7.0 config defaults.
Tom Clegg [Mon, 25 Sep 2023 14:45:11 +0000 (10:45 -0400)]
20300: Use Rails 7.0 config defaults.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Bypass query cache when re-fetching record for race check.
Tom Clegg [Mon, 25 Sep 2023 14:43:32 +0000 (10:43 -0400)]
20300: Bypass query cache when re-fetching record for race check.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Merge similar test cases and fix query cache sensitivity.
Tom Clegg [Mon, 25 Sep 2023 14:05:23 +0000 (10:05 -0400)]
20300: Merge similar test cases and fix query cache sensitivity.

Token expiration tests needlessly relied on the Rails < 7.0 behavior
of disabling the query cache during tests, such that successive calls
to db_current_time would never return equal times.

Merged the admin and non-admin test cases, since they have the same
structure and nearly the same expectations.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Turn off overrides of Rails 7.0 framework defaults.
Tom Clegg [Thu, 21 Sep 2023 20:37:05 +0000 (16:37 -0400)]
20300: Turn off overrides of Rails 7.0 framework defaults.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Fix relative import paths.
Tom Clegg [Thu, 21 Sep 2023 19:57:53 +0000 (15:57 -0400)]
20300: Fix relative import paths.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Update exec_query bind vars usage for Rails 7.
Tom Clegg [Thu, 21 Sep 2023 18:56:21 +0000 (14:56 -0400)]
20300: Update exec_query bind vars usage for Rails 7.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Update time.to_s(:db) to to_fs(:db).
Tom Clegg [Thu, 21 Sep 2023 15:50:19 +0000 (11:50 -0400)]
20300: Update time.to_s(:db) to to_fs(:db).

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Delete obsolete websocket stub.
Tom Clegg [Thu, 21 Sep 2023 15:49:52 +0000 (11:49 -0400)]
20300: Delete obsolete websocket stub.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Fix missing imports in initializers.
Tom Clegg [Thu, 21 Sep 2023 15:49:27 +0000 (11:49 -0400)]
20300: Fix missing imports in initializers.

Autoload no longer works in initializers.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Add sprockets-rails.
Tom Clegg [Thu, 21 Sep 2023 02:18:33 +0000 (22:18 -0400)]
20300: Add sprockets-rails.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Rail 7.0 app:update.
Tom Clegg [Thu, 21 Sep 2023 02:06:34 +0000 (22:06 -0400)]
20300: Rail 7.0 app:update.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Update to Rails 7.0.
Tom Clegg [Thu, 21 Sep 2023 01:19:18 +0000 (21:19 -0400)]
20300: Update to Rails 7.0.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Use Rails 6.1 config defaults.
Tom Clegg [Thu, 21 Sep 2023 02:05:55 +0000 (22:05 -0400)]
20300: Use Rails 6.1 config defaults.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Remove config overrides from Rails 5.0 upgrade.
Tom Clegg [Tue, 19 Sep 2023 15:10:56 +0000 (11:10 -0400)]
20300: Remove config overrides from Rails 5.0 upgrade.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

9 months ago20300: Use Rails 6.0 config defaults.
Tom Clegg [Thu, 21 Sep 2023 02:05:32 +0000 (22:05 -0400)]
20300: Use Rails 6.0 config defaults.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>