arvados.git
3 years ago16669: Test oidcTokenAuthorizer cache.
Tom Clegg [Tue, 26 Jan 2021 04:58:15 +0000 (23:58 -0500)]
16669: Test oidcTokenAuthorizer cache.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16669: Fix cache bug.
Tom Clegg [Mon, 25 Jan 2021 21:01:51 +0000 (16:01 -0500)]
16669: Fix cache bug.

When caching a valid token we were updating the database with
exp=now+10m but updating the cache with exp="". When checking the
cache, exp="" indicates we don't need to re-check the access token and
extend the database entry's expiry field -- so we never did, we just
passed through the HMAC, which RailsAPI rejected based on the expiry
time in the database row.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoAdd missing file closes #17281
Peter Amstutz [Mon, 25 Jan 2021 20:26:54 +0000 (15:26 -0500)]
Add missing file closes #17281

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years agoMerge branch '17286-print-urls' refs #17286
Peter Amstutz [Mon, 25 Jan 2021 19:56:15 +0000 (14:56 -0500)]
Merge branch '17286-print-urls' refs #17286

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago17286: Tweak output if neither workbench2 or workbench1 is defined
Peter Amstutz [Mon, 25 Jan 2021 16:25:36 +0000 (11:25 -0500)]
17286: Tweak output if neither workbench2 or workbench1 is defined

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago16306: Fix runPassenger HOME env in non-production case.
Tom Clegg [Mon, 25 Jan 2021 15:45:30 +0000 (10:45 -0500)]
16306: Fix runPassenger HOME env in non-production case.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoFix ineffassign warning.
Ward Vandewege [Sun, 24 Jan 2021 18:50:48 +0000 (13:50 -0500)]
Fix ineffassign warning.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17286: URL to final output collection
Peter Amstutz [Fri, 22 Jan 2021 20:48:12 +0000 (15:48 -0500)]
17286: URL to final output collection

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago17286: Log clickable URL to container request in workbench
Peter Amstutz [Fri, 22 Jan 2021 19:26:09 +0000 (14:26 -0500)]
17286: Log clickable URL to container request in workbench

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years agoMake sure that our Python 3 based packages conflict with the older
Ward Vandewege [Fri, 22 Jan 2021 17:29:07 +0000 (12:29 -0500)]
Make sure that our Python 3 based packages conflict with the older
Python 2 based ones.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years agoMerge branch '17256-nodejs-dependency-update'
Lucas Di Pentima [Fri, 22 Jan 2021 16:28:51 +0000 (13:28 -0300)]
Merge branch '17256-nodejs-dependency-update'
Refs #17256

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago16306: Merge branch 'master'
Tom Clegg [Fri, 22 Jan 2021 05:58:58 +0000 (00:58 -0500)]
16306: Merge branch 'master'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Remove obsolete RailsSessionSecretToken config.
Tom Clegg [Fri, 22 Jan 2021 05:53:42 +0000 (00:53 -0500)]
16306: Remove obsolete RailsSessionSecretToken config.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17256: Changes required nodejs version on package building scripts.
Lucas Di Pentima [Thu, 21 Jan 2021 22:46:22 +0000 (19:46 -0300)]
17256: Changes required nodejs version on package building scripts.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago17170: Re-word comment, document ...-Login-Username header.
Tom Clegg [Thu, 21 Jan 2021 22:00:00 +0000 (17:00 -0500)]
17170: Re-word comment, document ...-Login-Username header.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Allow admin users to run commands in any container.
Tom Clegg [Thu, 21 Jan 2021 21:54:56 +0000 (16:54 -0500)]
17170: Allow admin users to run commands in any container.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoMerge branch '17215-aws-roles-a-d-c'
Ward Vandewege [Thu, 21 Jan 2021 21:51:55 +0000 (16:51 -0500)]
Merge branch '17215-aws-roles-a-d-c'

closes #17215

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17215: Merge branch 'master' into 17215-aws-roles-a-d-c
Ward Vandewege [Thu, 21 Jan 2021 21:51:11 +0000 (16:51 -0500)]
17215: Merge branch 'master' into 17215-aws-roles-a-d-c

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16306: Merge branch 'master'
Tom Clegg [Thu, 21 Jan 2021 21:33:40 +0000 (16:33 -0500)]
16306: Merge branch 'master'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17256: Makes arvados-server install to ask for node v10.x
Lucas Di Pentima [Thu, 21 Jan 2021 20:39:31 +0000 (17:39 -0300)]
17256: Makes arvados-server install to ask for node v10.x

This is to be able to run wb2 integration tests with Cypress v6.x

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years agoMerge branch '17014-controller-container-requests-take3'
Nico Cesar [Thu, 21 Jan 2021 19:55:22 +0000 (14:55 -0500)]
Merge branch '17014-controller-container-requests-take3'

closes #17014

Arvados-DCO-1.1-Signed-off-by: Nico Cesar <nico@curii.com>

3 years agoMerge branch '17109-keepweb-urls-samesite-doc'
Lucas Di Pentima [Thu, 21 Jan 2021 18:16:05 +0000 (15:16 -0300)]
Merge branch '17109-keepweb-urls-samesite-doc'
Closes #17109

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago17109: Fixes typo.
Lucas Di Pentima [Thu, 21 Jan 2021 18:15:20 +0000 (15:15 -0300)]
17109: Fixes typo.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago17170: Improve error message for unrecognizable target UUID.
Tom Clegg [Thu, 21 Jan 2021 16:14:49 +0000 (11:14 -0500)]
17170: Improve error message for unrecognizable target UUID.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17109: Explains how keep-web handles requests with tokens in the URL.
Lucas Di Pentima [Thu, 21 Jan 2021 15:55:13 +0000 (12:55 -0300)]
17109: Explains how keep-web handles requests with tokens in the URL.

Adds a reference to the RFC that explains the Same-Site concept.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years agoaddressing https://dev.arvados.org/issues/17014#note-41
Nico Cesar [Thu, 21 Jan 2021 01:35:36 +0000 (20:35 -0500)]
addressing https://dev.arvados.org/issues/17014#note-41

Arvados-DCO-1.1-Signed-off-by: Nico Cesar <nico@curii.com>

3 years ago17014: controller handles container requests
Nico Cesar [Thu, 7 Jan 2021 16:23:21 +0000 (11:23 -0500)]
17014: controller handles container requests

This commit has:
  * Container Requests in the new codepath
  * runtime_constraints and scheduling parameters have now default
    values and cannot be nil. This affects Railsapi CR comparison
    in Final state
  * Adapted Login and Logout so they work for CR
  * Tests in  lib/controller/integration_test.go that take in account
    runtime_token with intermediate clusters
  * Some tests in  lib/controller/federation_test.go had to be addapted,
    but for the most part remained as is to gurantee compatibilty
  * Added the check that SystemRootToken has to be non-empty
  * Railsapi fixtures that include finalized CR that are used in the tests to
    make sure we return the right object
  * Minimal changes in the documentation to reflect all the user visible
    changes
  * Added expires_at parameter for login and related test

Arvados-DCO-1.1-Signed-off-by: Nico Cesar <nico@curii.com>

3 years agoMerge branch '17222-doc-add-keep-components-overview'
Ward Vandewege [Wed, 20 Jan 2021 22:12:20 +0000 (17:12 -0500)]
Merge branch '17222-doc-add-keep-components-overview'

refs #17222

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years agoMerge branch 'master' into 17222-doc-add-keep-components-overview
Ward Vandewege [Wed, 20 Jan 2021 22:11:28 +0000 (17:11 -0500)]
Merge branch 'master' into 17222-doc-add-keep-components-overview

refs #17222

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17222: implement review feedback.
Ward Vandewege [Wed, 20 Jan 2021 21:39:54 +0000 (16:39 -0500)]
17222: implement review feedback.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17215: add IAM role support to arvados-dispatch-cloud on EC2.
Ward Vandewege [Wed, 20 Jan 2021 21:16:11 +0000 (16:16 -0500)]
17215: add IAM role support to arvados-dispatch-cloud on EC2.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17222: add overview documentation for the components of Keep.
Ward Vandewege [Wed, 20 Jan 2021 18:38:20 +0000 (13:38 -0500)]
17222: add overview documentation for the components of Keep.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17170: Merge branch 'master'
Tom Clegg [Wed, 20 Jan 2021 15:37:39 +0000 (10:37 -0500)]
17170: Merge branch 'master'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoMerge branch '16981-logincluster-sync-groups-tests'
Lucas Di Pentima [Wed, 20 Jan 2021 15:10:42 +0000 (12:10 -0300)]
Merge branch '16981-logincluster-sync-groups-tests'
Closes #16981

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years agoMerge branch '17267-broken-schema-links' refs #17267
Peter Amstutz [Tue, 19 Jan 2021 22:01:25 +0000 (17:01 -0500)]
Merge branch '17267-broken-schema-links' refs #17267

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago17267: Add integration test for broken link in $schemas
Peter Amstutz [Tue, 19 Jan 2021 21:39:30 +0000 (16:39 -0500)]
17267: Add integration test for broken link in $schemas

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago16306: Hide "easy install" option from the install docs.
Tom Clegg [Tue, 19 Jan 2021 20:42:50 +0000 (15:42 -0500)]
16306: Hide "easy install" option from the install docs.

To be un-hidden when it is fully implemented and usable.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Fixup test.
Tom Clegg [Tue, 19 Jan 2021 20:32:15 +0000 (15:32 -0500)]
16306: Fixup test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fix crash when http transport uses default nil transport.
Tom Clegg [Tue, 19 Jan 2021 16:50:00 +0000 (11:50 -0500)]
17170: Fix crash when http transport uses default nil transport.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Remove old bash scripts.
Tom Clegg [Mon, 18 Jan 2021 21:33:16 +0000 (16:33 -0500)]
16306: Remove old bash scripts.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Update tests.
Tom Clegg [Mon, 18 Jan 2021 21:31:31 +0000 (16:31 -0500)]
16306: Update tests.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Use cwd as default source tree.
Tom Clegg [Mon, 18 Jan 2021 21:31:40 +0000 (16:31 -0500)]
16306: Use cwd as default source tree.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17267: Don't immediately fail if an extension schema is missing
Peter Amstutz [Mon, 18 Jan 2021 19:36:07 +0000 (14:36 -0500)]
17267: Don't immediately fail if an extension schema is missing

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago16306: Merge branch 'master'
Tom Clegg [Mon, 18 Jan 2021 18:55:27 +0000 (13:55 -0500)]
16306: Merge branch 'master'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Drop gateway_address from searchable columns.
Tom Clegg [Thu, 14 Jan 2021 21:52:31 +0000 (16:52 -0500)]
17170: Drop gateway_address from searchable columns.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Add missing method to APIStub.
Tom Clegg [Thu, 14 Jan 2021 21:50:26 +0000 (16:50 -0500)]
17170: Add missing method to APIStub.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Use exec() to eliminate intermediate arvados-client process.
Tom Clegg [Thu, 14 Jan 2021 21:16:20 +0000 (16:16 -0500)]
17170: Use exec() to eliminate intermediate arvados-client process.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Improve error messages.
Tom Clegg [Thu, 14 Jan 2021 20:40:07 +0000 (15:40 -0500)]
17170: Improve error messages.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Check container is readable before checking write permission.
Tom Clegg [Thu, 14 Jan 2021 20:39:34 +0000 (15:39 -0500)]
17170: Check container is readable before checking write permission.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fix -help output.
Tom Clegg [Thu, 14 Jan 2021 20:38:38 +0000 (15:38 -0500)]
17170: Fix -help output.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17109: Adds notes about Keep-web Same-Site restrictions.
Lucas Di Pentima [Thu, 14 Jan 2021 20:00:16 +0000 (17:00 -0300)]
17109: Adds notes about Keep-web Same-Site restrictions.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago17170: Merge branch 'master'
Tom Clegg [Thu, 14 Jan 2021 16:08:46 +0000 (11:08 -0500)]
17170: Merge branch 'master'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fix closing pty/tty when nil.
Tom Clegg [Thu, 14 Jan 2021 04:22:51 +0000 (23:22 -0500)]
17170: Fix closing pty/tty when nil.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fixup error display.
Tom Clegg [Thu, 14 Jan 2021 04:22:40 +0000 (23:22 -0500)]
17170: Fixup error display.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: "arvados-client shell" accepts container request UUID.
Tom Clegg [Wed, 13 Jan 2021 22:18:08 +0000 (17:18 -0500)]
17170: "arvados-client shell" accepts container request UUID.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Improve error messages.
Tom Clegg [Wed, 13 Jan 2021 22:17:50 +0000 (17:17 -0500)]
17170: Improve error messages.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Don't reuse transport that might have http2 enabled.
Tom Clegg [Wed, 13 Jan 2021 22:06:57 +0000 (17:06 -0500)]
17170: Don't reuse transport that might have http2 enabled.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Dry up close-connection-on-error.
Tom Clegg [Wed, 13 Jan 2021 22:06:11 +0000 (17:06 -0500)]
17170: Dry up close-connection-on-error.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Allow shell only if this user submitted all associated CRs.
Tom Clegg [Wed, 13 Jan 2021 22:03:40 +0000 (17:03 -0500)]
17170: Allow shell only if this user submitted all associated CRs.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoDocumentation: make the arvados-dispatch-cloud installation instructions
Ward Vandewege [Wed, 13 Jan 2021 21:37:48 +0000 (16:37 -0500)]
Documentation: make the arvados-dispatch-cloud installation instructions
a bit more clear.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago17170: Test arvados-client shell command.
Tom Clegg [Wed, 13 Jan 2021 05:13:48 +0000 (00:13 -0500)]
17170: Test arvados-client shell command.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fix dial when API host var is host:port.
Tom Clegg [Wed, 13 Jan 2021 05:10:09 +0000 (00:10 -0500)]
17170: Fix dial when API host var is host:port.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Test controller->crunch-run tunnel.
Tom Clegg [Wed, 13 Jan 2021 04:22:46 +0000 (23:22 -0500)]
17170: Test controller->crunch-run tunnel.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Fixup gateway auth secret.
Tom Clegg [Wed, 13 Jan 2021 02:57:40 +0000 (21:57 -0500)]
17170: Fixup gateway auth secret.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Use TLS for controller->crunch-run traffic.
Tom Clegg [Wed, 13 Jan 2021 02:03:40 +0000 (21:03 -0500)]
17170: Use TLS for controller->crunch-run traffic.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Specify login username. Improve logging.
Tom Clegg [Tue, 12 Jan 2021 05:30:45 +0000 (00:30 -0500)]
17170: Specify login username. Improve logging.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17170: Add "arvados-client shell" subcommand and backend support.
Tom Clegg [Mon, 11 Jan 2021 20:53:28 +0000 (15:53 -0500)]
17170: Add "arvados-client shell" subcommand and backend support.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoMerge branch '16106-azure-spot-instance-support'
Ward Vandewege [Mon, 11 Jan 2021 14:18:01 +0000 (09:18 -0500)]
Merge branch '16106-azure-spot-instance-support'

closes #16106

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16106: Merge branch 'master' into 16106-azure-spot-instance-support
Ward Vandewege [Mon, 11 Jan 2021 14:17:32 +0000 (09:17 -0500)]
16106: Merge branch 'master' into 16106-azure-spot-instance-support

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16106: address review comments.
Ward Vandewege [Mon, 11 Jan 2021 14:16:58 +0000 (09:16 -0500)]
16106: address review comments.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16981: Removes the import cycle issue by moving code to lib/boot.
Lucas Di Pentima [Fri, 8 Jan 2021 21:59:51 +0000 (18:59 -0300)]
16981: Removes the import cycle issue by moving code to lib/boot.

As the code was really meant to be lib/boot helpers, instead of having
it on the arvadostest package, it's now on lib/boot/helper.go

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago16981: Removes config loader code to fix import cycle.
Lucas Di Pentima [Fri, 8 Jan 2021 21:37:14 +0000 (18:37 -0300)]
16981: Removes config loader code to fix import cycle.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago16981: Adds federation test on sync-groups.
Lucas Di Pentima [Fri, 8 Jan 2021 15:24:14 +0000 (12:24 -0300)]
16981: Adds federation test on sync-groups.

Makes sure that running the tool on a federated cluster with admin credentials
from the LoginCluster works correctly.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years agoFixes a couple of typos on the documentation. No issue #.
Lucas Di Pentima [Thu, 7 Jan 2021 22:27:39 +0000 (19:27 -0300)]
Fixes a couple of typos on the documentation. No issue #.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years ago16306: Command usage help.
Tom Clegg [Thu, 7 Jan 2021 22:24:29 +0000 (17:24 -0500)]
16306: Command usage help.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16106: update Azure preemptible node code after real world testing. Add
Ward Vandewege [Thu, 7 Jan 2021 18:40:53 +0000 (13:40 -0500)]
16106: update Azure preemptible node code after real world testing. Add
       documentation.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years agoMerge branch '17224-login-sync' refs #17224
Peter Amstutz [Thu, 7 Jan 2021 16:49:59 +0000 (11:49 -0500)]
Merge branch '17224-login-sync' refs #17224

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago17224: Document LoginCluster configuration for login-sync
Peter Amstutz [Wed, 6 Jan 2021 21:39:19 +0000 (16:39 -0500)]
17224: Document LoginCluster configuration for login-sync

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years agoDocumentation: fix typos.
Ward Vandewege [Wed, 6 Jan 2021 19:46:06 +0000 (14:46 -0500)]
Documentation: fix typos.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16106: Merge branch 'master' into 16106-azure-spot-instance-support
Ward Vandewege [Wed, 6 Jan 2021 14:52:13 +0000 (09:52 -0500)]
16106: Merge branch 'master' into 16106-azure-spot-instance-support

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years agoMerge branch '17175-boot-fail-rake-seed'
Tom Clegg [Wed, 6 Jan 2021 14:45:14 +0000 (09:45 -0500)]
Merge branch '17175-boot-fail-rake-seed'

fixes #17175

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16981: Extracts test federation building code to the arvadostest package.
Lucas Di Pentima [Tue, 5 Jan 2021 20:40:27 +0000 (17:40 -0300)]
16981: Extracts test federation building code to the arvadostest package.

This is going to be reused on other integration test suites.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>

3 years agoFix typos in the documentation.
Ward Vandewege [Tue, 5 Jan 2021 17:51:26 +0000 (12:51 -0500)]
Fix typos in the documentation.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years agoMerge branch '17225-ruby-sdk' refs #17225
Peter Amstutz [Tue, 5 Jan 2021 16:43:03 +0000 (11:43 -0500)]
Merge branch '17225-ruby-sdk' refs #17225

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago16306: Remove daemontools dependency.
Tom Clegg [Mon, 4 Jan 2021 20:58:24 +0000 (15:58 -0500)]
16306: Remove daemontools dependency.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Exit 0 when startup-then-shutdown goes as planned.
Tom Clegg [Mon, 4 Jan 2021 20:42:35 +0000 (15:42 -0500)]
16306: Exit 0 when startup-then-shutdown goes as planned.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Fix inability to shutdown passenger processes.
Tom Clegg [Mon, 4 Jan 2021 20:26:46 +0000 (15:26 -0500)]
16306: Fix inability to shutdown passenger processes.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoWe now publish packages for Ubuntu Focal (20.04), and have stopped
Ward Vandewege [Mon, 4 Jan 2021 20:12:25 +0000 (15:12 -0500)]
We now publish packages for Ubuntu Focal (20.04), and have stopped
publishing them for Ubuntu Xenial (16.04).

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

3 years ago16306: Refactor docker scripts into arvados-package command.
Tom Clegg [Mon, 4 Jan 2021 16:22:09 +0000 (11:22 -0500)]
16306: Refactor docker scripts into arvados-package command.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17224: Provide alternate credentials to use for creating user tokens
Peter Amstutz [Wed, 23 Dec 2020 21:19:39 +0000 (16:19 -0500)]
17224: Provide alternate credentials to use for creating user tokens

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago17224: Fix to have multiple clients connected to separate clusters
Peter Amstutz [Sat, 2 Jan 2021 16:59:57 +0000 (11:59 -0500)]
17224: Fix to have multiple clients connected to separate clusters

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

3 years ago16306: Rename arvados-dev buildpackage -> arvados-package build
Tom Clegg [Tue, 29 Dec 2020 20:18:19 +0000 (15:18 -0500)]
16306: Rename arvados-dev buildpackage -> arvados-package build

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years agoMerge branch '17151-system-token-validation'
Tom Clegg [Mon, 28 Dec 2020 21:52:16 +0000 (16:52 -0500)]
Merge branch '17151-system-token-validation'

closes #17151

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17175: Wait for seedDatabase before starting railsapi.
Tom Clegg [Mon, 28 Dec 2020 20:33:33 +0000 (15:33 -0500)]
17175: Wait for seedDatabase before starting railsapi.

If the rake task and the app start concurrently, they both try to set
up the database seeds. The exclusive-locking mechanism in
services/api/app/lib/current_api_client.rb doesn't cover this case
because the rake task and app don't use the same cache. If the app
commits the database seeds between the rake task's "check existing"
and "commit" steps, commit fails and the rake task aborts.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago17175: Fix logging label for setuidgid-wrapped procs.
Tom Clegg [Mon, 28 Dec 2020 20:21:04 +0000 (15:21 -0500)]
17175: Fix logging label for setuidgid-wrapped procs.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Comment out Workbench2 so health check succeeds.
Tom Clegg [Mon, 28 Dec 2020 15:36:51 +0000 (10:36 -0500)]
16306: Comment out Workbench2 so health check succeeds.

To be re-enabled when supported by install/package/boot.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Fix env var ordering.
Tom Clegg [Mon, 28 Dec 2020 15:35:39 +0000 (10:35 -0500)]
16306: Fix env var ordering.

Ensure our GOBIN takes precedence over inherited value.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Remove more unneeded files from package.
Tom Clegg [Mon, 28 Dec 2020 15:35:26 +0000 (10:35 -0500)]
16306: Remove more unneeded files from package.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Fix permission issues.
Tom Clegg [Mon, 28 Dec 2020 15:35:03 +0000 (10:35 -0500)]
16306: Fix permission issues.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 years ago16306: Circumvent Rails redirect-to-https in workbench health check.
Tom Clegg [Mon, 28 Dec 2020 15:33:27 +0000 (10:33 -0500)]
16306: Circumvent Rails redirect-to-https in workbench health check.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>