arvados.git
11 years agoreader fixes
Tom Clegg [Tue, 25 Jun 2013 04:16:21 +0000 (00:16 -0400)]
reader fixes

11 years agoadd missing newline at end of manifest
Tom Clegg [Tue, 25 Jun 2013 03:52:07 +0000 (23:52 -0400)]
add missing newline at end of manifest

11 years agofix KeyError in os.environ check
Tom Clegg [Tue, 25 Jun 2013 03:47:51 +0000 (23:47 -0400)]
fix KeyError in os.environ check

11 years agofix for bare repos
Tom Clegg [Tue, 25 Jun 2013 03:37:09 +0000 (23:37 -0400)]
fix for bare repos

11 years agohash and grep examples for new reader/writer tools
Tom Clegg [Tue, 25 Jun 2013 03:07:11 +0000 (23:07 -0400)]
hash and grep examples for new reader/writer tools

11 years agoadd Reader classes, local storage mode, and basic test suite
Tom Clegg [Mon, 24 Jun 2013 22:15:03 +0000 (18:15 -0400)]
add Reader classes, local storage mode, and basic test suite

11 years agouse which to find crunch-job instead of hoping sudo preserves PATH
Tom Clegg [Tue, 25 Jun 2013 02:26:06 +0000 (22:26 -0400)]
use which to find crunch-job instead of hoping sudo preserves PATH

11 years agouse find_or_create_by instead of rescue RecordNotUnique
Tom Clegg [Sun, 23 Jun 2013 13:21:12 +0000 (09:21 -0400)]
use find_or_create_by instead of rescue RecordNotUnique

11 years agoupdate dev job docs
Tom Clegg [Sat, 22 Jun 2013 22:01:57 +0000 (18:01 -0400)]
update dev job docs

11 years agoremove some leftovers from subversion support
Tom Clegg [Sat, 22 Jun 2013 21:46:48 +0000 (17:46 -0400)]
remove some leftovers from subversion support

11 years agofix attempts to save dev job status in arvados db
Tom Clegg [Sat, 22 Jun 2013 21:43:29 +0000 (17:43 -0400)]
fix attempts to save dev job status in arvados db

11 years agofix dev job id
Tom Clegg [Sat, 22 Jun 2013 21:39:46 +0000 (17:39 -0400)]
fix dev job id

11 years agoshow full uuid even in uuid column on index pages
Tom Clegg [Sat, 22 Jun 2013 21:27:25 +0000 (17:27 -0400)]
show full uuid even in uuid column on index pages

11 years agoadd likely job dependencies section
Tom Clegg [Fri, 21 Jun 2013 18:37:39 +0000 (14:37 -0400)]
add likely job dependencies section

11 years agosend git-archive from ctl to compute node instead of running git-pull on compute
Tom Clegg [Fri, 21 Jun 2013 16:45:08 +0000 (12:45 -0400)]
send git-archive from ctl to compute node instead of running git-pull on compute

11 years agowork around sudo environment sanitizing
Tom Clegg [Fri, 21 Jun 2013 16:43:26 +0000 (12:43 -0400)]
work around sudo environment sanitizing

11 years agoupdate docs
Tom Clegg [Fri, 21 Jun 2013 16:42:20 +0000 (12:42 -0400)]
update docs

11 years agoconfigurable setuid for crunch jobs
Tom Clegg [Thu, 20 Jun 2013 16:44:03 +0000 (12:44 -0400)]
configurable setuid for crunch jobs

11 years agoobey RAILS_ENV if given
Tom Clegg [Thu, 20 Jun 2013 16:14:28 +0000 (12:14 -0400)]
obey RAILS_ENV if given

11 years agotweak daemontools scripts
Tom Clegg [Thu, 20 Jun 2013 16:14:18 +0000 (12:14 -0400)]
tweak daemontools scripts

11 years agotweak daemontools scripts
Tom Clegg [Thu, 20 Jun 2013 15:56:42 +0000 (11:56 -0400)]
tweak daemontools scripts

11 years agoavoid sending html redirect to api client
Tom Clegg [Thu, 20 Jun 2013 15:16:46 +0000 (11:16 -0400)]
avoid sending html redirect to api client

11 years agomake dependency install instructions paste-friendly
Tom Clegg [Thu, 20 Jun 2013 15:15:22 +0000 (11:15 -0400)]
make dependency install instructions paste-friendly

11 years agoadd CollectionWriter and Keep classes to Python SDK
Tom Clegg [Thu, 20 Jun 2013 03:33:27 +0000 (23:33 -0400)]
add CollectionWriter and Keep classes to Python SDK

11 years agoadd missing attributes to keep_disk api response
Tom Clegg [Thu, 20 Jun 2013 03:32:45 +0000 (23:32 -0400)]
add missing attributes to keep_disk api response

11 years agofix crunch script path
Tom Clegg [Thu, 20 Jun 2013 02:29:36 +0000 (22:29 -0400)]
fix crunch script path

11 years agofix here-docs
Tom Clegg [Wed, 19 Jun 2013 21:37:06 +0000 (17:37 -0400)]
fix here-docs

11 years agoupdate job intro
Tom Clegg [Wed, 19 Jun 2013 19:39:59 +0000 (15:39 -0400)]
update job intro

11 years agoremove stub notice
Tom Clegg [Wed, 19 Jun 2013 19:19:09 +0000 (15:19 -0400)]
remove stub notice

11 years agoremove emacs tmp file
Tom Clegg [Wed, 19 Jun 2013 19:15:00 +0000 (15:15 -0400)]
remove emacs tmp file

11 years agomore crunch install instructions
Tom Clegg [Wed, 19 Jun 2013 16:53:21 +0000 (12:53 -0400)]
more crunch install instructions

11 years agohandle auth tokens with api_client=0 better
Tom Clegg [Wed, 19 Jun 2013 16:37:57 +0000 (12:37 -0400)]
handle auth tokens with api_client=0 better

11 years agofix http status for "not logged in" response
Tom Clegg [Wed, 19 Jun 2013 16:37:29 +0000 (12:37 -0400)]
fix http status for "not logged in" response

11 years agoport crunch dispatcher from whjobmanager to crunch-job
Tom Clegg [Tue, 18 Jun 2013 21:22:04 +0000 (17:22 -0400)]
port crunch dispatcher from whjobmanager to crunch-job

11 years agouse arv instead of curl in admin cheat sheet
Tom Clegg [Tue, 18 Jun 2013 20:13:58 +0000 (16:13 -0400)]
use arv instead of curl in admin cheat sheet

11 years agoalways use https in workbench curl examples
Tom Clegg [Tue, 18 Jun 2013 20:13:37 +0000 (16:13 -0400)]
always use https in workbench curl examples

11 years agofix up cli/curl example code
Tom Clegg [Tue, 18 Jun 2013 20:06:23 +0000 (16:06 -0400)]
fix up cli/curl example code

11 years agoadd trusted client info to install doc
Tom Clegg [Tue, 18 Jun 2013 19:35:34 +0000 (15:35 -0400)]
add trusted client info to install doc

11 years agoupdate to new nav menu
Tom Clegg [Tue, 18 Jun 2013 17:56:12 +0000 (13:56 -0400)]
update to new nav menu

11 years agowhitespace
Tom Clegg [Tue, 18 Jun 2013 16:08:46 +0000 (12:08 -0400)]
whitespace

11 years agonav menus
Tom Clegg [Tue, 18 Jun 2013 16:03:12 +0000 (12:03 -0400)]
nav menus

11 years agopluralize resource name in python example
Tom Clegg [Tue, 18 Jun 2013 15:47:57 +0000 (11:47 -0400)]
pluralize resource name in python example

11 years agoFix ssh ProxyCommand lines.
Ward Vandewege [Tue, 18 Jun 2013 16:17:59 +0000 (12:17 -0400)]
Fix ssh ProxyCommand lines.

11 years agoadd python example to generic workbench object display page
Tom Clegg [Tue, 18 Jun 2013 01:17:52 +0000 (21:17 -0400)]
add python example to generic workbench object display page

11 years agoadd ApiClient#is_trusted, show list of api tokens in Workbench
Tom Clegg [Mon, 17 Jun 2013 21:40:23 +0000 (17:40 -0400)]
add ApiClient#is_trusted, show list of api tokens in Workbench

11 years agoMore tweaks for the ssh page.
Ward Vandewege [Mon, 17 Jun 2013 15:37:40 +0000 (11:37 -0400)]
More tweaks for the ssh page.

11 years agoImprove 'Setting up SSH access' instructions.
Ward Vandewege [Mon, 17 Jun 2013 14:04:48 +0000 (10:04 -0400)]
Improve 'Setting up SSH access' instructions.

11 years agofix formatting
Tom Clegg [Fri, 14 Jun 2013 20:41:49 +0000 (16:41 -0400)]
fix formatting

11 years agoadd unverified SSL certificate note
Tom Clegg [Fri, 14 Jun 2013 20:40:50 +0000 (16:40 -0400)]
add unverified SSL certificate note

11 years agofix up formatting
Tom Clegg [Fri, 14 Jun 2013 20:38:53 +0000 (16:38 -0400)]
fix up formatting

11 years agoupdate cli sdk doc, tweak json output options
Tom Clegg [Fri, 14 Jun 2013 20:37:13 +0000 (16:37 -0400)]
update cli sdk doc, tweak json output options

11 years agorename secret_token.rb -> secret_token.rb.example
Tom Clegg [Fri, 14 Jun 2013 19:44:39 +0000 (15:44 -0400)]
rename secret_token.rb -> secret_token.rb.example

11 years agoupdate "application name" identifier
Tom Clegg [Fri, 14 Jun 2013 15:42:11 +0000 (11:42 -0400)]
update "application name" identifier

11 years agorename wh to arv
Tom Clegg [Fri, 14 Jun 2013 15:40:32 +0000 (11:40 -0400)]
rename wh to arv

11 years agofix up wh tool
Tom Clegg [Fri, 14 Jun 2013 15:40:11 +0000 (11:40 -0400)]
fix up wh tool

11 years agofix up load_where_param
Tom Clegg [Fri, 14 Jun 2013 15:39:41 +0000 (11:39 -0400)]
fix up load_where_param

11 years agoadd tutorials and references to home page
Tom Clegg [Thu, 13 Jun 2013 19:30:55 +0000 (15:30 -0400)]
add tutorials and references to home page

11 years agoadd front page dashboard
Tom Clegg [Wed, 12 Jun 2013 18:53:43 +0000 (14:53 -0400)]
add front page dashboard

11 years agoadd repositories#get_all_permissions
Tom Clegg [Wed, 12 Jun 2013 04:40:49 +0000 (00:40 -0400)]
add repositories#get_all_permissions

11 years agomove authorized_keys#get_all_logins to virtual_machines#get_all_logins
Tom Clegg [Wed, 12 Jun 2013 04:38:39 +0000 (00:38 -0400)]
move authorized_keys#get_all_logins to virtual_machines#get_all_logins

11 years agoimprove error reporting
Tom Clegg [Wed, 12 Jun 2013 04:37:38 +0000 (00:37 -0400)]
improve error reporting

11 years agoinclude csrf token with x-editable ajax
Tom Clegg [Wed, 12 Jun 2013 04:37:14 +0000 (00:37 -0400)]
include csrf token with x-editable ajax

11 years agoshow cli update example on generic object#get page
Tom Clegg [Tue, 11 Jun 2013 21:35:46 +0000 (17:35 -0400)]
show cli update example on generic object#get page

11 years agoadd user->repo permission to cheat sheet
Tom Clegg [Tue, 11 Jun 2013 21:35:27 +0000 (17:35 -0400)]
add user->repo permission to cheat sheet

11 years agosmarten up authorized_keys#get_all_logins response
Tom Clegg [Tue, 11 Jun 2013 20:39:06 +0000 (16:39 -0400)]
smarten up authorized_keys#get_all_logins response

11 years agoremove less critical nav items
Tom Clegg [Tue, 11 Jun 2013 20:38:36 +0000 (16:38 -0400)]
remove less critical nav items

11 years agoMore layout fixes.
Ward Vandewege [Tue, 11 Jun 2013 20:26:30 +0000 (16:26 -0400)]
More layout fixes.

11 years agoLayout fixes.
Ward Vandewege [Tue, 11 Jun 2013 20:21:32 +0000 (16:21 -0400)]
Layout fixes.

11 years agoFix title for workbench install instructions.
Ward Vandewege [Tue, 11 Jun 2013 20:20:01 +0000 (16:20 -0400)]
Fix title for workbench install instructions.

11 years agoMerge branch 'master' of git.clinicalfuture.com:arvados
Ward Vandewege [Tue, 11 Jun 2013 20:18:35 +0000 (16:18 -0400)]
Merge branch 'master' of git.clinicalfuture.com:arvados

11 years agoalways clear thread.current session info
Tom Clegg [Tue, 11 Jun 2013 20:19:21 +0000 (16:19 -0400)]
always clear thread.current session info

11 years agoAdd workbench install instructions.
Ward Vandewege [Tue, 11 Jun 2013 20:18:26 +0000 (16:18 -0400)]
Add workbench install instructions.

11 years agoDelete apps/workbench capistrano files; they have been moved to a
Ward Vandewege [Tue, 11 Jun 2013 18:32:30 +0000 (14:32 -0400)]
Delete apps/workbench capistrano files; they have been moved to a
separate repository.

11 years agoWhitespace.
Ward Vandewege [Tue, 11 Jun 2013 18:32:00 +0000 (14:32 -0400)]
Whitespace.

11 years agoBe more explicit.
Ward Vandewege [Tue, 11 Jun 2013 17:39:42 +0000 (13:39 -0400)]
Be more explicit.

11 years agoFormatting fix
Ward Vandewege [Tue, 11 Jun 2013 17:28:18 +0000 (13:28 -0400)]
Formatting fix

11 years agoadd Repositories resource, fix authorized_user attr name, some wb fixes
Tom Clegg [Tue, 11 Jun 2013 17:00:06 +0000 (13:00 -0400)]
add Repositories resource, fix authorized_user attr name, some wb fixes

11 years agoMore API server installation instructions.
Ward Vandewege [Tue, 11 Jun 2013 15:49:34 +0000 (11:49 -0400)]
More API server installation instructions.

11 years agoRemove reference to orvosapi.com, replaced with arvadosapi.com
Ward Vandewege [Tue, 11 Jun 2013 15:10:49 +0000 (11:10 -0400)]
Remove reference to orvosapi.com, replaced with arvadosapi.com

11 years agoDelete capistrano files; they have been moved to a separate repository.
Ward Vandewege [Tue, 11 Jun 2013 14:28:22 +0000 (10:28 -0400)]
Delete capistrano files; they have been moved to a separate repository.

11 years agoadd /authorized_keys/get_all_logins
Tom Clegg [Mon, 10 Jun 2013 19:30:38 +0000 (15:30 -0400)]
add /authorized_keys/get_all_logins

11 years agofix current_user in model
Tom Clegg [Mon, 10 Jun 2013 18:21:33 +0000 (14:21 -0400)]
fix current_user in model

11 years agodo not render attributes of non-owned objects with x-editable
Tom Clegg [Mon, 10 Jun 2013 00:46:32 +0000 (20:46 -0400)]
do not render attributes of non-owned objects with x-editable

11 years agoadd links#index, allow non-admin links#show
Tom Clegg [Mon, 10 Jun 2013 00:42:04 +0000 (20:42 -0400)]
add links#index, allow non-admin links#show

11 years agoadd users#index, allow non-admin users#show
Tom Clegg [Mon, 10 Jun 2013 00:31:20 +0000 (20:31 -0400)]
add users#index, allow non-admin users#show

11 years agoinclude links that reference me in links#index
Tom Clegg [Mon, 10 Jun 2013 00:24:44 +0000 (20:24 -0400)]
include links that reference me in links#index

11 years agoexpose Keys, VMs, Jobs tabs to non-admin users
Tom Clegg [Sun, 9 Jun 2013 20:03:14 +0000 (16:03 -0400)]
expose Keys, VMs, Jobs tabs to non-admin users

11 years agoadd admin cheat sheet
Tom Clegg [Sun, 9 Jun 2013 19:47:57 +0000 (15:47 -0400)]
add admin cheat sheet

11 years agoinclude indivually permitted objects in #index responses
Tom Clegg [Sun, 9 Jun 2013 18:41:58 +0000 (14:41 -0400)]
include indivually permitted objects in #index responses

11 years agoadd VirtualMachine resource to workbench
Tom Clegg [Sat, 8 Jun 2013 06:04:42 +0000 (02:04 -0400)]
add VirtualMachine resource to workbench

11 years agoadd VirtualMachine resource
Tom Clegg [Sat, 8 Jun 2013 05:58:29 +0000 (01:58 -0400)]
add VirtualMachine resource

11 years agofix redirect/error behavior for session timeouts
Tom Clegg [Sat, 8 Jun 2013 05:26:46 +0000 (01:26 -0400)]
fix redirect/error behavior for session timeouts

11 years agomore x-editable
Tom Clegg [Fri, 7 Jun 2013 22:02:04 +0000 (18:02 -0400)]
more x-editable

11 years agoadd insecure-https config option, improve error reporting
Tom Clegg [Fri, 7 Jun 2013 22:01:19 +0000 (18:01 -0400)]
add insecure-https config option, improve error reporting

11 years agoimplement destroy method in arvados model proxy
Tom Clegg [Fri, 7 Jun 2013 05:16:06 +0000 (01:16 -0400)]
implement destroy method in arvados model proxy

11 years agofix up editable stuff
Tom Clegg [Fri, 7 Jun 2013 05:11:29 +0000 (01:11 -0400)]
fix up editable stuff

11 years agoadd andand
Tom Clegg [Fri, 7 Jun 2013 05:10:54 +0000 (01:10 -0400)]
add andand

11 years agomake authorized_keys editable on index page
Tom Clegg [Fri, 7 Jun 2013 03:41:45 +0000 (23:41 -0400)]
make authorized_keys editable on index page

11 years agotweak authorized_key#new
Tom Clegg [Thu, 6 Jun 2013 22:44:21 +0000 (18:44 -0400)]
tweak authorized_key#new

11 years agoadd authorized_keys views and editable fields
Tom Clegg [Thu, 6 Jun 2013 22:19:52 +0000 (18:19 -0400)]
add authorized_keys views and editable fields