git.arvados.org - arvados.git/log

Tom Clegg [Thu, 21 Dec 2017 18:48:54 +0000 (13:48 -0500)]

Note DCO requirement.

Fix some typos.

No issue #

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 21 Dec 2017 18:25:18 +0000 (13:25 -0500)]

Fix copyright header, and copyright header checker exit code.

No issue #

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 21 Dec 2017 17:41:19 +0000 (12:41 -0500)]

Merge branch '12844-webdav-move-into-self'

fixes #12844

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 21 Dec 2017 16:53:26 +0000 (11:53 -0500)]

Merge branch 'patch-2' of https://github.com/jrandall/arvados

fixes #11621

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Joshua C. Randall [Thu, 21 Dec 2017 14:54:13 +0000 (14:54 +0000)]

fix bwa-mem.cwl docker repo

Change from missing `biodckr/bwa` repo to minimal bwa docker image `lh3lh3/bwa`
The new docker image has `bwa` set as entrypoint, so also change `baseCommand` from `[bwa, mem]` to `[mem]`
Fixes 11621

Arvados-DCO-1.1-Signed-off-by: Joshua C. Randall <jcrandall@alum.mit.edu>

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Tom Clegg [Thu, 21 Dec 2017 15:21:04 +0000 (10:21 -0500)]

12844: Refuse to unreference a directory by moving it into itself.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Fernando Monserrat [Thu, 21 Dec 2017 15:14:35 +0000 (12:14 -0300)]

#12850 trim whitespaces for lint
Arvados-DCO-1.1-Signed-off-by: Fernando Monserrat <fmonserrat@veritasgenetics.com>

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Fuad Muhic [Thu, 21 Dec 2017 14:39:10 +0000 (15:39 +0100)]

Made updating groups and collections less verbose.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Thu, 21 Dec 2017 13:09:47 +0000 (14:09 +0100)]

Merge branch '11876-r-sdk' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Thu, 21 Dec 2017 12:57:51 +0000 (13:57 +0100)]

Fixed some bugs and improved error handling.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Ward Vandewege [Thu, 21 Dec 2017 02:50:15 +0000 (21:50 -0500)]

Expand the README a bit, fix some syntax errors, add instructions for
building/installing from source.

refs #11876

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

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Ward Vandewege [Thu, 21 Dec 2017 02:22:37 +0000 (21:22 -0500)]

Fix typo

refs #11876

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

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Lucas Di Pentima [Wed, 20 Dec 2017 22:24:45 +0000 (19:24 -0300)]

Merge branch 'master' into 12479-wb-structured-vocabulary

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Fernando Monserrat [Wed, 20 Dec 2017 20:25:23 +0000 (17:25 -0300)]

#12850 add tag as input for docker tag
Arvados-DCO-1.1-Signed-off-by: Fernando Monserrat <fmonserrat@veritasgenetics.com>

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Lucas Di Pentima [Wed, 20 Dec 2017 19:13:14 +0000 (16:13 -0300)]

12479: When requesting the collection, only ask the api server for the
properties.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Wed, 20 Dec 2017 18:38:04 +0000 (15:38 -0300)]

12479: Save button changes state when having changes to save and after
saving. When no tags, show a proper message.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Wed, 20 Dec 2017 16:13:14 +0000 (13:13 -0300)]

12479: Replacing isDirty flag with dirty stream

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Wed, 20 Dec 2017 16:00:21 +0000 (13:00 -0300)]

12479: WIP making the save objject show the save state

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Fuad Muhic [Wed, 20 Dec 2017 10:25:47 +0000 (11:25 +0100)]

Added a fix to project create and project update.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Wed, 20 Dec 2017 09:25:34 +0000 (10:25 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Wed, 20 Dec 2017 09:24:27 +0000 (10:24 +0100)]

Users are no longer able to delete root folder.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Lucas Di Pentima [Tue, 19 Dec 2017 22:04:10 +0000 (19:04 -0300)]

12479: Properties saving working. Remove tag button styling.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Tom Clegg [Tue, 19 Dec 2017 21:46:29 +0000 (16:46 -0500)]

Merge branch '12848-python-versions'

refs #12848

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Tue, 19 Dec 2017 21:41:52 +0000 (16:41 -0500)]

12848: Fix python builder ignoring --build-version.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Lucas Di Pentima [Tue, 19 Dec 2017 18:45:30 +0000 (15:45 -0300)]

12479: Remove tag button working.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Tue, 19 Dec 2017 18:16:30 +0000 (15:16 -0300)]

12479: Refactoring to simplify the code.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Fuad Muhic [Tue, 19 Dec 2017 17:17:42 +0000 (18:17 +0100)]

Updated README file

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Tue, 19 Dec 2017 17:03:41 +0000 (18:03 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Tue, 19 Dec 2017 17:02:45 +0000 (18:02 +0100)]

Added function to work with projects.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Tom Clegg [Tue, 19 Dec 2017 16:19:00 +0000 (11:19 -0500)]

12755: Stop building arvados-docker-cleaner for centos7.

(until we make the package installable again)

refs #12755

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Fuad Muhic [Tue, 19 Dec 2017 14:36:46 +0000 (15:36 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Tue, 19 Dec 2017 14:34:44 +0000 (15:34 +0100)]

Added feature to move File-like object inside collection.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Tom Clegg [Tue, 19 Dec 2017 09:14:55 +0000 (04:14 -0500)]

12377: Update workbench test breaking since 484246ac0.

refs #12377

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Tue, 19 Dec 2017 03:21:39 +0000 (22:21 -0500)]

Merge branch '12715-slow-propfind'

fixes #12715

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Lucas Di Pentima [Mon, 18 Dec 2017 22:12:04 +0000 (19:12 -0300)]

12479: Add Selectize via npm package

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Tom Clegg [Mon, 18 Dec 2017 22:04:36 +0000 (17:04 -0500)]

Merge branch '12822-keepproxy-token-scope'

refs #12822

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Mon, 18 Dec 2017 20:36:10 +0000 (15:36 -0500)]

Merge branch '12377-workbench-composer-link' refs #12377

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Lucas Di Pentima [Mon, 18 Dec 2017 19:42:19 +0000 (16:42 -0300)]

12479: Passing UUID & controller name data from data-mount-mithril element
instead of parsing URL.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Tom Clegg [Mon, 18 Dec 2017 17:52:09 +0000 (12:52 -0500)]

Merge branch '12821-sbatch-script-race'

refs #12821

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Ward Vandewege [Mon, 18 Dec 2017 16:06:09 +0000 (11:06 -0500)]

Prepare for packaging.

refs #12837

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

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Fuad Muhic [Mon, 18 Dec 2017 15:39:41 +0000 (16:39 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Fuad Muhic [Mon, 18 Dec 2017 15:37:44 +0000 (16:37 +0100)]

Made Subcollection and ArvadosFile more flexible.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Lucas Di Pentima [Mon, 18 Dec 2017 13:57:34 +0000 (10:57 -0300)]

12479: Assign default vocabulary on model instantiation

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Mon, 18 Dec 2017 13:06:03 +0000 (10:06 -0300)]

12479: Get remote vocabulary definition, use a fallback is it doesn't exist.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Lucas Di Pentima [Mon, 18 Dec 2017 11:10:21 +0000 (08:10 -0300)]

12479: New tag editor for structured vocabulary. There are pending
issues to be solved.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

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Tom Clegg [Sat, 16 Dec 2017 00:13:24 +0000 (19:13 -0500)]

12821: Fix race in concurrent calls to submit().

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Fri, 15 Dec 2017 20:21:26 +0000 (15:21 -0500)]

Merge branch '12721-build-test-version'

refs #12721

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Fri, 15 Dec 2017 17:51:07 +0000 (12:51 -0500)]

12721: Add run-build-test-packages-one-target.sh --build-version arg

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Fri, 15 Dec 2017 15:14:13 +0000 (10:14 -0500)]

12715: Rename flag !reading => alwaysReadEOF.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Fri, 15 Dec 2017 14:25:32 +0000 (09:25 -0500)]

Add composer_url to arvbox workbench config refs #12377

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Fuad Muhic [Fri, 15 Dec 2017 12:01:48 +0000 (13:01 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

commit | commitdiff | tree

Fuad Muhic [Fri, 15 Dec 2017 12:00:41 +0000 (13:00 +0100)]

Added feature to delete file from a collection.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Tom Clegg [Fri, 15 Dec 2017 03:25:38 +0000 (22:25 -0500)]

12715: Fix slow PROPFIND by avoiding content probing.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Fri, 15 Dec 2017 03:13:17 +0000 (22:13 -0500)]

12822: Allow reading from keepproxy with collection sharing tokens.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Thu, 14 Dec 2017 23:05:23 +0000 (18:05 -0500)]

12377: Add link to composer on workbench

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 21:52:50 +0000 (16:52 -0500)]

Merge branch '8311-mount-git'

closes #8311

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 21:22:08 +0000 (16:22 -0500)]

8311: Fix gitUrl discovery doc for config git_repo_https_base: true.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 21:14:00 +0000 (16:14 -0500)]

8311: Ensure git tree is readable even with umask 077.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 21:01:19 +0000 (16:01 -0500)]

8311: Remove support for writable git_tree mount.

Feature is of dubious value, and expected behavior isn't clear --
e.g., should all files be world-writable?

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 20:56:18 +0000 (15:56 -0500)]

8311: Ensure git tree tmpdir is readable by container.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Thu, 14 Dec 2017 20:22:24 +0000 (15:22 -0500)]

8311: Pass in container token to extractTree

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 20:22:18 +0000 (15:22 -0500)]

8311: Ensure gitUrl is always a string in the discovery doc.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 18:17:12 +0000 (13:17 -0500)]

8311: Fix API tests broken in 4343e1f.

* Restore arvados repo dropped from tarball.

* Fix git repo fixtures being removed in API test teardown.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 17:14:48 +0000 (12:14 -0500)]

8311: Tidy up integration test services.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 16:37:10 +0000 (11:37 -0500)]

8311: Update docs to describe current implementation.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 16:26:02 +0000 (11:26 -0500)]

8311: Reject invalid/unsupported git mounts. Default to path="/".

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Fuad Muhic [Thu, 14 Dec 2017 16:26:32 +0000 (17:26 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

commit | commitdiff | tree

Fuad Muhic [Thu, 14 Dec 2017 16:22:01 +0000 (17:22 +0100)]

Added feature to create new file in a particular collection.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Tom Clegg [Wed, 13 Dec 2017 22:13:42 +0000 (17:13 -0500)]

8311: Try some git_tree mounts in TestSetupMounts.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Tue, 12 Dec 2017 23:56:07 +0000 (18:56 -0500)]

8311: Add git_tree mount type.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 15:29:10 +0000 (10:29 -0500)]

8311: Add auth handler tests.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Tue, 12 Dec 2017 23:58:15 +0000 (18:58 -0500)]

8311: Access git repos by UUID.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

commit | commitdiff | tree

Tom Clegg [Thu, 14 Dec 2017 15:26:08 +0000 (10:26 -0500)]

8311: Fix "read" or "write" mistakenly appended to response data.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Thu, 14 Dec 2017 15:25:14 +0000 (10:25 -0500)]

8311: Remove debug printf.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Thu, 14 Dec 2017 14:41:03 +0000 (09:41 -0500)]

Fix Access-Control-Allow-Headers CORS header tests refs #12060

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Wed, 13 Dec 2017 21:17:43 +0000 (16:17 -0500)]

Add Content-Type to Access-Control-Allow-Headers CORS headers refs #12060

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Fuad Muhic [Wed, 13 Dec 2017 17:08:49 +0000 (18:08 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

commit | commitdiff | tree

Fuad Muhic [Wed, 13 Dec 2017 17:07:54 +0000 (18:07 +0100)]

Refactored collection tree into separate file.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Peter Amstutz [Wed, 13 Dec 2017 16:12:56 +0000 (11:12 -0500)]

Merge branch '4019-query-properties' closes #4019

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Wed, 13 Dec 2017 15:01:38 +0000 (10:01 -0500)]

4019: More tests for error cases

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Fuad Muhic [Wed, 13 Dec 2017 14:59:36 +0000 (15:59 +0100)]

Added ability to write to a collection file.

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Peter Amstutz [Wed, 13 Dec 2017 14:50:53 +0000 (09:50 -0500)]

4019: Improve error checking, add tests for some error cases

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Wed, 13 Dec 2017 14:12:42 +0000 (09:12 -0500)]

Merge branch '12614-node-states' refs #12614

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 21:19:37 +0000 (16:19 -0500)]

Tag arvados/jobs image with $cwl_runner_version instead of git hash refs #12811

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 20:39:30 +0000 (15:39 -0500)]

12614: Can shutdown failed nodes.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 18:58:16 +0000 (13:58 -0500)]

12614: Support daemon actor aware of 'fail' node state

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

commit | commitdiff | tree

Peter Amstutz [Tue, 12 Dec 2017 18:35:21 +0000 (13:35 -0500)]

12614: Make node manager aware of "fail" node state.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

commit | commitdiff | tree

Fuad Muhic [Tue, 12 Dec 2017 16:52:57 +0000 (17:52 +0100)]

Merge branch 'master' of git.curoverse.com:arvados into 11876-r-sdk

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

commit | commitdiff | tree

Tom Clegg [Tue, 12 Dec 2017 16:51:44 +0000 (11:51 -0500)]

Merge branch '12803-unescaped-colon-filename'

fixes #12803

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 16:29:48 +0000 (11:29 -0500)]

Merge branch '12765-workbench-404-trashed' refs #12765

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

commit | commitdiff | tree

Tom Clegg [Tue, 12 Dec 2017 16:29:37 +0000 (11:29 -0500)]

12803: Accept unescaped colons in filenames.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 15:40:40 +0000 (10:40 -0500)]

4019: Add index for efficient jsonb query on collection properties

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Tue, 12 Dec 2017 15:32:15 +0000 (10:32 -0500)]

4019: Add URI quoting option for keys. Update docs. Fix tests.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Fuad Muhic [Tue, 12 Dec 2017 15:01:08 +0000 (16:01 +0100)]

Implemented feature to get size of ArvadosFile or Subcollection

Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

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Peter Amstutz [Mon, 11 Dec 2017 22:50:00 +0000 (17:50 -0500)]

4019: Update docs. Tweak syntax of 'exists' and add alternate form.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Tom Clegg [Mon, 11 Dec 2017 22:00:40 +0000 (17:00 -0500)]

Merge branch '12550-crunch1-exit-race'

refs #12550

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Peter Amstutz [Mon, 11 Dec 2017 21:34:37 +0000 (16:34 -0500)]

Merge branch '12511-is-trashed-query' refs #12511

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Peter Amstutz [Mon, 11 Dec 2017 21:33:12 +0000 (16:33 -0500)]

4019: Expand testing. Make behavior consistent for != and "not in"

Rename "?" to "exists" and add "not exists".

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

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Tom Clegg [Mon, 11 Dec 2017 21:16:13 +0000 (16:16 -0500)]

Merge branch '12167-python-request-id'

refs #12167

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

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Tom Clegg [Mon, 11 Dec 2017 20:43:04 +0000 (15:43 -0500)]

12167: Allow --silent to be combined with -*-progress flags.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>