Michael R. Crusoe [Thu, 15 Oct 2020 15:16:37 +0000 (17:16 +0200)]
SSLHandshakeError is Python 2 only refs #17008
Arvados-DCO-1.1-Signed-off-by: Michael R. Crusoe <mcrusoe@curii.com>
Ward Vandewege [Fri, 16 Oct 2020 01:23:38 +0000 (21:23 -0400)]
When calculating the version of our Go and Rails deb/rpm packages, take
the 'build' directory into account.
refs #17011
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 16 Oct 2020 01:04:55 +0000 (21:04 -0400)]
Bugfix: fix detection of already generated Python deb/rpm packages.
refs #16982
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 16 Oct 2020 00:29:25 +0000 (20:29 -0400)]
Fix whitespace in build/run-library.sh
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 15 Oct 2020 21:06:45 +0000 (17:06 -0400)]
Separate inline/download keep-web ports refs #16812
This makes inline viewing of private files work as expected with
arvbox, which is helpful for development and testing.
It relies on "TrustAllContent: true", so it is also XSS insecure.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 15 Oct 2020 14:59:56 +0000 (10:59 -0400)]
Merge branch '16982-tilde-devN' refs #16982
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 14 Oct 2020 14:29:52 +0000 (10:29 -0400)]
Fix heading for "upgrading" no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Wed, 14 Oct 2020 13:31:11 +0000 (09:31 -0400)]
Merge branch '16992-disable-pg-pager' into master
closes #16992
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 14 Oct 2020 13:30:29 +0000 (09:30 -0400)]
16992: Merge branch 'master' into 16992-disable-pg-pager
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Tue, 13 Oct 2020 14:16:32 +0000 (11:16 -0300)]
Merge branch '16981-sync-group-report-fix'. Refs #16981
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Peter Amstutz [Mon, 12 Oct 2020 19:52:35 +0000 (15:52 -0400)]
Merge branch '16989-fix-fed-migrate' refs #16989
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 12 Oct 2020 19:42:20 +0000 (15:42 -0400)]
16989: setup_on_activate needs to happen after update, not before
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 12 Oct 2020 19:23:14 +0000 (15:23 -0400)]
16989: Don't auto-admin first user in federation migrate test
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 12 Oct 2020 19:18:32 +0000 (15:18 -0400)]
16989: Make sure username is valid before trying to create repo
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Mon, 12 Oct 2020 14:23:18 +0000 (11:23 -0300)]
16981: Fixes error reporting when failing to create a remote group.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Ward Vandewege [Mon, 12 Oct 2020 02:12:12 +0000 (22:12 -0400)]
Fix a few more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Sat, 10 Oct 2020 12:56:02 +0000 (08:56 -0400)]
16922: disable the postgres pager in the rails postinst script.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Sat, 10 Oct 2020 00:12:53 +0000 (20:12 -0400)]
Setup default VM/repo in setup method refs #16989
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 9 Oct 2020 22:52:14 +0000 (18:52 -0400)]
Setup default VM from AutoSetupNewUsersWithVmUUID refs #16989
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 9 Oct 2020 18:30:58 +0000 (14:30 -0400)]
Merge branch '16989-user-setup' refs #16989
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 9 Oct 2020 17:00:05 +0000 (13:00 -0400)]
16989: Test all combinations of remote user status
Rework remote user setup/activate/unsetup. Sending welcome email
moved to model setup method. Add tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 9 Oct 2020 16:26:04 +0000 (12:26 -0400)]
16989: Add test to sync is_invited
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Fri, 9 Oct 2020 13:41:09 +0000 (10:41 -0300)]
Merge branch '16981-logincluster-sync-groups-fix'
Refs #16981
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Lucas Di Pentima [Thu, 8 Oct 2020 21:01:09 +0000 (18:01 -0300)]
16981: Retrieves the local clusterID from exported config.
Also, fixed tests by not starting a new api server and using what run-tests
provides.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Peter Amstutz [Thu, 8 Oct 2020 20:07:06 +0000 (16:07 -0400)]
16982: OS packages build as ~devN, Python and Ruby use .devN
Also ~rcN becomes .rcN in Ruby.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 8 Oct 2020 18:28:49 +0000 (14:28 -0400)]
Merge branch '16976-python-rc-packages' refs #16976
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Thu, 8 Oct 2020 18:23:19 +0000 (14:23 -0400)]
16976: use unfiltered version number when checking for deb/rpm of our
Python packages.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 8 Oct 2020 17:40:18 +0000 (13:40 -0400)]
16976: Use adjusted version tag to accomodate release candidate packages
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 8 Oct 2020 16:55:31 +0000 (12:55 -0400)]
16976: Support release candidates for our Python packages
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Thu, 8 Oct 2020 03:40:42 +0000 (23:40 -0400)]
When doing arvbox hotreset, make sure to use flock around the rake task.
refs #16955
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 8 Oct 2020 01:24:28 +0000 (21:24 -0400)]
Merge branch '16955-more-fixes' into master
refs #16955
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 8 Oct 2020 00:53:22 +0000 (20:53 -0400)]
Serialize the service startup in arvbox by adding a dependency on the
availability of the API server for those services that need it. This
greatly speeds up boot. Also remove superfluous service configuration
for keepproxy.
refs #16955
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Wed, 7 Oct 2020 20:37:06 +0000 (16:37 -0400)]
Merge branch '16928-non-boolean-param-warning'
refs #16928
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Ward Vandewege [Wed, 7 Oct 2020 18:33:25 +0000 (14:33 -0400)]
Actually load our custom sysctl.conf entries.
refs #16955
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Wed, 7 Oct 2020 17:32:10 +0000 (13:32 -0400)]
16928: Avoid misleading warning when using implicit bool defaults.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Tom Clegg [Wed, 7 Oct 2020 17:31:03 +0000 (13:31 -0400)]
16928: Fill in missing bool defaults in *_requires_parameters.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Tom Clegg [Wed, 7 Oct 2020 17:30:47 +0000 (13:30 -0400)]
16928: Fix advertised default value of include_old_versions.
Also remove special defaults-override logic, now that the existing
load_params code knows the right defaults.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Tom Clegg [Wed, 7 Oct 2020 17:25:12 +0000 (13:25 -0400)]
16928: Improve warning message.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Ward Vandewege [Wed, 7 Oct 2020 15:45:50 +0000 (11:45 -0400)]
Merge branch '16955-fix-arvbox' into master
closes #16955
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 7 Oct 2020 15:45:09 +0000 (11:45 -0400)]
16955: Merge branch 'master' into 16955-fix-arvbox
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 7 Oct 2020 01:06:01 +0000 (21:06 -0400)]
16955: a number of fixes to make the federation migration tests pass
with arvbox again. Followup to #16267.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 6 Oct 2020 21:23:23 +0000 (17:23 -0400)]
Merge branch '16956-doc-fix-zenweb-liquid-4' into master
closes #16956
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 6 Oct 2020 21:14:48 +0000 (17:14 -0400)]
16956: address review comments.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 6 Oct 2020 18:02:17 +0000 (14:02 -0400)]
16956: update our zenweb/liquid package to support liquid 4+
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 6 Oct 2020 17:56:07 +0000 (13:56 -0400)]
Merge branch '16809-s3-v4-signature'
closes #16809
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Ward Vandewege [Tue, 6 Oct 2020 15:55:41 +0000 (11:55 -0400)]
Fix arv-federation-migrate-test jenkins job: update hardcoded arvbox
container paths.
refs #16267
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 6 Oct 2020 13:47:55 +0000 (09:47 -0400)]
Fix arvados-cwl-conformance-tests and arv-federation-migrate-test
jenkins jobs.
refs #16267
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 6 Oct 2020 00:26:10 +0000 (20:26 -0400)]
Fix more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Mon, 5 Oct 2020 18:18:27 +0000 (14:18 -0400)]
Can't use generic copy for container requests refs #16886
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Mon, 5 Oct 2020 18:13:00 +0000 (14:13 -0400)]
16809: Test S3 API using Amazon client library.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Peter Amstutz [Mon, 5 Oct 2020 18:01:36 +0000 (14:01 -0400)]
Fix 'test' login method to return v2 token, no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Sun, 4 Oct 2020 21:25:37 +0000 (17:25 -0400)]
Fix more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Sun, 4 Oct 2020 21:10:27 +0000 (17:10 -0400)]
Add a cli example: create an empty collection.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Sat, 3 Oct 2020 14:29:57 +0000 (11:29 -0300)]
Merge branch '16750-logincluster-wb1-trash-fix'
Closes #16750
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Ward Vandewege [Sat, 3 Oct 2020 01:10:19 +0000 (21:10 -0400)]
Fix some more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Thu, 1 Oct 2020 13:52:23 +0000 (10:52 -0300)]
16750: Avoids using params on requests to make it compatible with federation.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Lucas Di Pentima [Fri, 2 Oct 2020 14:48:14 +0000 (11:48 -0300)]
Fixes collection_versioning mention on documentation. No issue #
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@di-pentima.com.ar>
Ward Vandewege [Thu, 1 Oct 2020 23:44:14 +0000 (19:44 -0400)]
Fix more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 1 Oct 2020 22:12:03 +0000 (18:12 -0400)]
Merge branch '16923-auth-api-client' refs #16923
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 1 Oct 2020 22:09:50 +0000 (18:09 -0400)]
16923: Improve architecture diagram a bit.
Fix comment about TrustedClients config item.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 1 Oct 2020 20:46:08 +0000 (16:46 -0400)]
arvados-cwl-runner, don't pull arvados/jobs:latest, pull arvados/jobs:version
refs #16886
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 1 Oct 2020 19:11:44 +0000 (15:11 -0400)]
16923: Add Login.TrustedClients to export
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 1 Oct 2020 17:58:43 +0000 (13:58 -0400)]
16923: Add peer federation / logincluster federation to architecture
Also rearrange the high-level architecture diagram a little bit.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 30 Sep 2020 18:08:12 +0000 (14:08 -0400)]
16923: Add note about federation types and trusted clients.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 23:12:50 +0000 (19:12 -0400)]
16923: Add "TrustedClients" configuration option.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 21:26:46 +0000 (17:26 -0400)]
16923: user/pass api_client is trusted by default
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 30 Sep 2020 21:13:59 +0000 (17:13 -0400)]
UserGet() passes "select" option along to batch update refs #16914
Fixes issue of user being deactivated because something called "get
user" and selected fields didn't include is_active.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Tue, 29 Sep 2020 21:53:53 +0000 (17:53 -0400)]
libpam-arvados-go: do not put a file with comments in
/usr/share/pam-configs, the `pam-auth-update` command does not take
kindly to that. Put that file in the package documentation directory
instead.
refs #15348
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 19:42:54 +0000 (15:42 -0400)]
Adjust arvbox shell to have /var/lib/arvados/bin in PATH
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 18:59:57 +0000 (14:59 -0400)]
Better help text for arvbox adduser/removeuser no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 18:54:44 +0000 (14:54 -0400)]
Merge branch '16914-inactive-user' closes #16914
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 29 Sep 2020 14:55:16 +0000 (10:55 -0400)]
16914: Make sure remote uninvited user is not invited here
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 28 Sep 2020 21:00:33 +0000 (17:00 -0400)]
16914: "Get current user" is forwarded to LoginCluster
Results from "get user" and "current user" are now cached, same as
"user list".
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 28 Sep 2020 19:36:54 +0000 (15:36 -0400)]
Merge branch '16913-logout' closes #16913
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 28 Sep 2020 18:43:05 +0000 (14:43 -0400)]
16913: Add upgrade note about LoginCluster
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Mon, 28 Sep 2020 18:28:18 +0000 (14:28 -0400)]
16913: Treat LoginCluster as a distinct login method.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Mon, 28 Sep 2020 15:59:28 +0000 (11:59 -0400)]
Merge branch '16267-change-arvbox-deps' into master
closes #16267
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 28 Sep 2020 15:58:54 +0000 (11:58 -0400)]
16267: Merge branch 'master' into 16267-change-arvbox-deps
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Mon, 28 Sep 2020 02:16:48 +0000 (22:16 -0400)]
Fix more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Sun, 27 Sep 2020 02:09:06 +0000 (22:09 -0400)]
Fix more golint warnings.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 22:17:13 +0000 (18:17 -0400)]
Merge branch '16874-configure-welcome-mail' refs #16874
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 22:04:29 +0000 (18:04 -0400)]
16874: Fix test.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Fri, 25 Sep 2020 21:31:43 +0000 (17:31 -0400)]
16267: fix logic bug, use local checked out arvados directory in dev
mode, not the copy under ~/.arvbox
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 21:17:06 +0000 (17:17 -0400)]
16874: Content of account_is_setup.text.erb uses Users.UserSetupMailText
The most straightforward solution seems to be for UserSetupMailText to
still be an erb template and is evaluated in the same environment as
as before, but it gets the code from the config file.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 18:55:31 +0000 (14:55 -0400)]
Merge branch '16825-delete-token' closes #16825
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 15:46:36 +0000 (11:46 -0400)]
16825: Document deleting token at the CLI
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 25 Sep 2020 15:07:02 +0000 (11:07 -0400)]
Recommend installing R package from https refs #16885
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 25 Sep 2020 05:00:43 +0000 (01:00 -0400)]
16809: Test keep-web with s3cmd if available.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Tom Clegg [Fri, 25 Sep 2020 04:42:01 +0000 (00:42 -0400)]
16809: Fix empty Host header value used in signature check.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Tom Clegg [Fri, 25 Sep 2020 04:41:26 +0000 (00:41 -0400)]
16809: Improve signature error reporting/logging.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>
Ward Vandewege [Fri, 25 Sep 2020 00:49:57 +0000 (20:49 -0400)]
16267: implement review feedback.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 24 Sep 2020 21:00:58 +0000 (17:00 -0400)]
Merge branch '16264-add-r-dependencies' into master
closes #16264
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 24 Sep 2020 21:00:25 +0000 (17:00 -0400)]
16264: Merge branch 'master' into 16264-add-r-dependencies
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Thu, 24 Sep 2020 20:58:40 +0000 (16:58 -0400)]
Merge branch '16827-fix-R-sdk' refs #16827
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 24 Sep 2020 20:01:20 +0000 (16:01 -0400)]
16884: Add public_project permission link to test fixtures
This is the permission link that gives the all users and anonymous
users read access to public favorites. It is added by database seeds,
but it also needs to be present in the fixtures.
refs #16884
refs #16811
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 23 Sep 2020 21:50:14 +0000 (17:50 -0400)]
16827: Don't append '/' to requests with query params. Bump version
Also remove package-cross loading with "source" that generated warnings.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 23 Sep 2020 20:40:55 +0000 (16:40 -0400)]
16827: Update the generated API to Arvados 2.0
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 23 Sep 2020 20:17:09 +0000 (16:17 -0400)]
16827: Fix getFileNamesFromResponse
Update tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Wed, 23 Sep 2020 23:46:21 +0000 (19:46 -0400)]
16267: switch to `arvados-server install -type test` for installing
dependencies.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 24 Sep 2020 00:56:12 +0000 (20:56 -0400)]
16264: add R dependencies as Debian packages to lib/install/deps.go
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>