arvados.git
2 years agoInstaller bugfix.
Ward Vandewege [Tue, 12 Apr 2022 18:20:18 +0000 (14:20 -0400)]
Installer bugfix.

refs #16375

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '16375-arvados-multinode-testing'
Javier Bértoli [Tue, 12 Apr 2022 14:05:11 +0000 (11:05 -0300)]
Merge branch '16375-arvados-multinode-testing'

closes #16375
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago16375: address review comments
Javier Bértoli [Tue, 12 Apr 2022 14:04:17 +0000 (11:04 -0300)]
16375: address review comments

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago16375: revert insecure flag in multi-host template file
Javier Bértoli [Mon, 11 Apr 2022 20:59:28 +0000 (17:59 -0300)]
16375: revert insecure flag in multi-host template file

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoMerge branch '18947-keepproxy'
Tom Clegg [Mon, 11 Apr 2022 15:19:42 +0000 (11:19 -0400)]
Merge branch '18947-keepproxy'

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago16375: Add multinode testing code
Javier Bértoli [Fri, 8 Apr 2022 21:30:51 +0000 (18:30 -0300)]
16375: Add multinode testing code

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoFix doc for correct CUDARequirement fields
Peter Amstutz [Fri, 8 Apr 2022 19:29:50 +0000 (15:29 -0400)]
Fix doc for correct CUDARequirement fields

no issue #

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoSync Arvados R SDK version with full release
Peter Amstutz [Fri, 8 Apr 2022 14:44:39 +0000 (10:44 -0400)]
Sync Arvados R SDK version with full release

refs #18701

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoFix the libarvados-perl package build. Fix the version number for that
Ward Vandewege [Fri, 8 Apr 2022 14:07:11 +0000 (10:07 -0400)]
Fix the libarvados-perl package build. Fix the version number for that
package.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoSet release date in admin/upgrading.html
Peter Amstutz [Thu, 7 Apr 2022 20:50:27 +0000 (16:50 -0400)]
Set release date in admin/upgrading.html

refs #18701

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18631-shell-login-sync'
Javier Bértoli [Wed, 6 Apr 2022 13:50:51 +0000 (10:50 -0300)]
Merge branch '18631-shell-login-sync'

closes #18631
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: fix path in shell login-sync cron
Javier Bértoli [Wed, 6 Apr 2022 13:30:07 +0000 (10:30 -0300)]
18631: fix path in shell login-sync cron

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: Add shell's vm uuid from the shell node state
Javier Bértoli [Tue, 5 Apr 2022 20:54:38 +0000 (17:54 -0300)]
18631: Add shell's vm uuid from the shell node state

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18947: Update test to new log fields. Add back "locator" log field.
Tom Clegg [Tue, 5 Apr 2022 19:21:21 +0000 (15:21 -0400)]
18947: Update test to new log fields. Add back "locator" log field.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoAdd upgrade note about change in default result order. refs #18943
Peter Amstutz [Tue, 5 Apr 2022 18:53:57 +0000 (14:53 -0400)]
Add upgrade note about change in default result order. refs #18943

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18947: Log version at startup.
Tom Clegg [Tue, 5 Apr 2022 18:20:07 +0000 (14:20 -0400)]
18947: Log version at startup.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18947: Refactor keepproxy as an arvados-server subcommand.
Tom Clegg [Tue, 5 Apr 2022 18:13:45 +0000 (14:13 -0400)]
18947: Refactor keepproxy as an arvados-server subcommand.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '18865-collection-permission-links'
Tom Clegg [Tue, 5 Apr 2022 15:38:09 +0000 (11:38 -0400)]
Merge branch '18865-collection-permission-links'

fixes #18865

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '18887-wb1-sends-v2-anonymous-token'
Ward Vandewege [Mon, 4 Apr 2022 19:38:05 +0000 (15:38 -0400)]
Merge branch '18887-wb1-sends-v2-anonymous-token'

closes #18887

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18887: Merge branch 'main' into 18887-wb1-sends-v2-anonymous-token
Ward Vandewege [Mon, 4 Apr 2022 19:33:28 +0000 (15:33 -0400)]
18887: Merge branch 'main' into 18887-wb1-sends-v2-anonymous-token

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18943-created-at-index' refs #18943
Peter Amstutz [Mon, 4 Apr 2022 19:01:37 +0000 (15:01 -0400)]
Merge branch '18943-created-at-index' refs #18943

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18887: Fix salted_secret check. Add test.
Ward Vandewege [Mon, 4 Apr 2022 19:01:18 +0000 (15:01 -0400)]
18887: Fix salted_secret check. Add test.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18865: Merge branch 'main'
Tom Clegg [Mon, 4 Apr 2022 18:49:11 +0000 (14:49 -0400)]
18865: Merge branch 'main'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18865: Rearrange code & update comments for clarity.
Tom Clegg [Mon, 4 Apr 2022 18:48:19 +0000 (14:48 -0400)]
18865: Rearrange code & update comments for clarity.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18943: Fix workbench bug
Peter Amstutz [Mon, 4 Apr 2022 18:02:40 +0000 (14:02 -0400)]
18943: Fix workbench bug

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: fix fixtures
Peter Amstutz [Mon, 4 Apr 2022 15:21:38 +0000 (11:21 -0400)]
18943: fix fixtures

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: Fixing fixture
Peter Amstutz [Mon, 4 Apr 2022 15:16:49 +0000 (11:16 -0400)]
18943: Fixing fixture

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18887: address review comments.
Ward Vandewege [Mon, 4 Apr 2022 15:00:25 +0000 (11:00 -0400)]
18887: address review comments.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18943: Tweaking fixtures
Peter Amstutz [Mon, 4 Apr 2022 14:50:06 +0000 (10:50 -0400)]
18943: Tweaking fixtures

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: Fix tests
Peter Amstutz [Mon, 4 Apr 2022 14:18:31 +0000 (10:18 -0400)]
18943: Fix tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoAdd csv output mode to the user activity script.
Ward Vandewege [Sat, 2 Apr 2022 15:40:04 +0000 (11:40 -0400)]
Add csv output mode to the user activity script.

refs #18903

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18943: Drop redundant indexes
Peter Amstutz [Fri, 1 Apr 2022 21:07:43 +0000 (17:07 -0400)]
18943: Drop redundant indexes

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: modified_by index doesn't need to be (desc, desc)
Peter Amstutz [Fri, 1 Apr 2022 21:03:44 +0000 (17:03 -0400)]
18943: modified_by index doesn't need to be (desc, desc)

Can use an (asc, asc) index for a (desc, desc) "order by".

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: Adjust default ordering of results to account for index order
Peter Amstutz [Fri, 1 Apr 2022 20:50:46 +0000 (16:50 -0400)]
18943: Adjust default ordering of results to account for index order

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: consistency between modified_at/created_at indexes
Peter Amstutz [Fri, 1 Apr 2022 20:46:49 +0000 (16:46 -0400)]
18943: consistency between modified_at/created_at indexes

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: add modified_at descending index
Peter Amstutz [Fri, 1 Apr 2022 20:36:39 +0000 (16:36 -0400)]
18943: add modified_at descending index

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18943: Adjust keyset_list_all for efficient decending order
Peter Amstutz [Fri, 1 Apr 2022 18:47:39 +0000 (14:47 -0400)]
18943: Adjust keyset_list_all for efficient decending order

Default is ascending (created_at asc, uuid asc) but if acending=False
to use the index properly the query needs to be
(created_at desc, uuid desc)

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18940-go-settings-conf'
Tom Clegg [Fri, 1 Apr 2022 18:26:30 +0000 (14:26 -0400)]
Merge branch '18940-go-settings-conf'

refs #18940

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18887: self.check_anonymous_user_token can now handle a full V2 token in
Ward Vandewege [Fri, 1 Apr 2022 18:09:36 +0000 (14:09 -0400)]
18887: self.check_anonymous_user_token can now handle a full V2 token in
       the config file. It can also verify a salted anonymous token.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18943: Migrate created_at indexes to (created_at, uuid)
Peter Amstutz [Fri, 1 Apr 2022 17:24:31 +0000 (13:24 -0400)]
18943: Migrate created_at indexes to (created_at, uuid)

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18631: remove unneeded dependency installing api into shell nodes
Javier Bértoli [Fri, 1 Apr 2022 16:46:33 +0000 (13:46 -0300)]
18631: remove unneeded dependency installing api into shell nodes

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoMerge branch '18903-fix-activity-script'
Ward Vandewege [Fri, 1 Apr 2022 13:15:06 +0000 (09:15 -0400)]
Merge branch '18903-fix-activity-script'

closes #18903

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: Merge branch 'main' into 18903-fix-activity-script
Ward Vandewege [Fri, 1 Apr 2022 13:14:31 +0000 (09:14 -0400)]
18903: Merge branch 'main' into 18903-fix-activity-script

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: make getCollectionName smarter: look up the name by uuid if it is
Ward Vandewege [Fri, 1 Apr 2022 13:05:23 +0000 (09:05 -0400)]
18903: make getCollectionName smarter: look up the name by uuid if it is
       available and fall back to look up by pdh if not. If the latter,
       always return the name of the oldest collection with that pdh.

       Clarify that start/end parameters are in UTC since all timestamps
       in the database are stored in UTC.

       Fix error when printing help text.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18887: add an integration test.
Ward Vandewege [Thu, 31 Mar 2022 19:50:07 +0000 (15:50 -0400)]
18887: add an integration test.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18631: don't force api resources on shell nodes
Javier Bértoli [Thu, 31 Mar 2022 18:42:23 +0000 (15:42 -0300)]
18631: don't force api resources on shell nodes

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: use SystemRootToken for login-sync
Javier Bértoli [Thu, 31 Mar 2022 00:15:29 +0000 (21:15 -0300)]
18631: use SystemRootToken for login-sync

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoRevert "18631: use SystemRootToken for login-sync"
Javier Bértoli [Thu, 31 Mar 2022 00:14:33 +0000 (21:14 -0300)]
Revert "18631: use SystemRootToken for login-sync"

This reverts commit 809668479c6ab182d879ed2aa0cfcae051a5eda7.
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: use SystemRootToken for login-sync
Javier Bértoli [Thu, 31 Mar 2022 00:06:13 +0000 (21:06 -0300)]
18631: use SystemRootToken for login-sync

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoMerge branch '18941-arv-prefetch' refs #18941
Peter Amstutz [Wed, 30 Mar 2022 19:30:24 +0000 (15:30 -0400)]
Merge branch '18941-arv-prefetch' refs #18941

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Update help text in arv-get subcommand
Peter Amstutz [Wed, 30 Mar 2022 19:29:21 +0000 (15:29 -0400)]
18941: Update help text in arv-get subcommand

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18940: Go clients load $HOME/.config/arvados/settings.conf
Tom Clegg [Wed, 30 Mar 2022 18:40:25 +0000 (14:40 -0400)]
18940: Go clients load $HOME/.config/arvados/settings.conf

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18941: Tweak the prefetch thread max to 7
Peter Amstutz [Wed, 30 Mar 2022 17:27:55 +0000 (13:27 -0400)]
18941: Tweak the prefetch thread max to 7

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18631: Address review comments, fix VM UUID in cron
Javier Bértoli [Wed, 30 Mar 2022 15:33:49 +0000 (12:33 -0300)]
18631: Address review comments, fix VM UUID in cron

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: Address review comments
Javier Bértoli [Wed, 30 Mar 2022 13:00:34 +0000 (10:00 -0300)]
18631: Address review comments

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18941: Rename cache_slot_get option to 'prefetch' for clarity
Peter Amstutz [Wed, 30 Mar 2022 03:09:46 +0000 (23:09 -0400)]
18941: Rename cache_slot_get option to 'prefetch' for clarity

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Fix tests.
Peter Amstutz [Wed, 30 Mar 2022 02:55:35 +0000 (22:55 -0400)]
18941: Fix tests.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: clamp prefetch to 6
Peter Amstutz [Wed, 30 Mar 2022 02:13:45 +0000 (22:13 -0400)]
18941: clamp prefetch to 6

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Clamp to 4 block prefetch
Peter Amstutz [Wed, 30 Mar 2022 01:55:26 +0000 (21:55 -0400)]
18941: Clamp to 4 block prefetch

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Clamp between 1 and 16 prefetch threads
Peter Amstutz [Wed, 30 Mar 2022 01:41:20 +0000 (21:41 -0400)]
18941: Clamp between 1 and 16 prefetch threads

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoc18941: fix cache_slot_get behavior
Peter Amstutz [Tue, 29 Mar 2022 22:01:54 +0000 (18:01 -0400)]
c18941: fix cache_slot_get behavior

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Separate get() behavior for prefetch
Peter Amstutz [Tue, 29 Mar 2022 20:52:47 +0000 (16:52 -0400)]
18941: Separate get() behavior for prefetch

Add flag to get() which causes it to return None immediately if a cache
slot already exists for a block.

In the standard behavior, if multiple readers try to get() the same
block, the first one will start downloading the block, and all the
others will wait and return the block content from the cache slot
when complete.

With the new optional behavior, if multiple readers try to get() the same
block, the first one will start downloading the block, and all the
others will immediately return None.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Fix another typo
Peter Amstutz [Tue, 29 Mar 2022 18:54:03 +0000 (14:54 -0400)]
18941: Fix another typo

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Fix typo
Peter Amstutz [Tue, 29 Mar 2022 18:53:20 +0000 (14:53 -0400)]
18941: Fix typo

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Need to leave some space for current block
Peter Amstutz [Tue, 29 Mar 2022 18:51:14 +0000 (14:51 -0400)]
18941: Need to leave some space for current block

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Order of operations
Peter Amstutz [Tue, 29 Mar 2022 17:02:10 +0000 (13:02 -0400)]
18941: Order of operations

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: FUSE set number of get threads based on cache size
Peter Amstutz [Tue, 29 Mar 2022 16:58:05 +0000 (12:58 -0400)]
18941: FUSE set number of get threads based on cache size

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: Add --threads option to arv-get
Peter Amstutz [Tue, 29 Mar 2022 16:24:53 +0000 (12:24 -0400)]
18941: Add --threads option to arv-get

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18941: bugfixing prefetch
Peter Amstutz [Tue, 29 Mar 2022 15:42:11 +0000 (15:42 +0000)]
18941: bugfixing prefetch

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18887: undo the warning introduced in 18676 if a v2 anonymous token is
Ward Vandewege [Mon, 28 Mar 2022 20:18:16 +0000 (16:18 -0400)]
18887: undo the warning introduced in 18676 if a v2 anonymous token is
       supplied in the config file, using a v2 anonymous token is now
       fine. Also add a config loader check for the minimum secret
       length if a v2 token is acceptable.

refs #18887, #18676

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18896-controller-logs-tokenUUIDs'
Ward Vandewege [Mon, 28 Mar 2022 19:28:19 +0000 (15:28 -0400)]
Merge branch '18896-controller-logs-tokenUUIDs'

refs #18896

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18896: Test token UUID logging.
Tom Clegg [Mon, 28 Mar 2022 15:23:09 +0000 (11:23 -0400)]
18896: Test token UUID logging.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18896: review feedback, un-pyramid the logrus.Fields update.
Ward Vandewege [Mon, 28 Mar 2022 14:14:09 +0000 (10:14 -0400)]
18896: review feedback, un-pyramid the logrus.Fields update.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: Merge branch 'main' into 18903-fix-activity-script
Ward Vandewege [Sat, 26 Mar 2022 00:32:27 +0000 (20:32 -0400)]
18903: Merge branch 'main' into 18903-fix-activity-script

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: add a date range option to the user activity report.
Ward Vandewege [Sat, 26 Mar 2022 00:30:09 +0000 (20:30 -0400)]
18903: add a date range option to the user activity report.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: handle deleted users properly.
Ward Vandewege [Fri, 25 Mar 2022 21:33:43 +0000 (17:33 -0400)]
18903: handle deleted users properly.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18896: add locking. Also handle v1 tokens shorter than 5 characters.
Ward Vandewege [Fri, 25 Mar 2022 20:37:28 +0000 (16:37 -0400)]
18896: add locking. Also handle v1 tokens shorter than 5 characters.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18865: Fix 422 on nonexistent link uuid.
Tom Clegg [Fri, 25 Mar 2022 18:54:05 +0000 (14:54 -0400)]
18865: Fix 422 on nonexistent link uuid.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18865: Merge branch 'main'
Tom Clegg [Fri, 25 Mar 2022 18:21:59 +0000 (14:21 -0400)]
18865: Merge branch 'main'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18865: Test perm links to workflows and container_requests, too.
Tom Clegg [Fri, 25 Mar 2022 18:19:15 +0000 (14:19 -0400)]
18865: Test perm links to workflows and container_requests, too.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18865: Support "permission links with me as tail_uuid" query.
Tom Clegg [Fri, 25 Mar 2022 16:03:23 +0000 (12:03 -0400)]
18865: Support "permission links with me as tail_uuid" query.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18887: it is OK for controller to forward the local anymous token,
Ward Vandewege [Fri, 25 Mar 2022 13:11:53 +0000 (09:11 -0400)]
18887: it is OK for controller to forward the local anymous token,
       because all anonymous tokens get mapped to the local anonymous
       token on every cluster.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18887: when wb1 sends the anonymous user token, it makes sure to always
Ward Vandewege [Fri, 25 Mar 2022 12:19:10 +0000 (08:19 -0400)]
18887: when wb1 sends the anonymous user token, it makes sure to always
       send a v2 token.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18896: controller logs the UUIDs of the tokens used in each request.
Ward Vandewege [Fri, 25 Mar 2022 11:58:48 +0000 (07:58 -0400)]
18896: controller logs the UUIDs of the tokens used in each request.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18865: Ensure can_manage reveals permission links to descendants.
Tom Clegg [Fri, 25 Mar 2022 06:29:32 +0000 (02:29 -0400)]
18865: Ensure can_manage reveals permission links to descendants.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18865: Test that can_manage reveals permission links to descendants.
Tom Clegg [Fri, 25 Mar 2022 06:29:29 +0000 (02:29 -0400)]
18865: Test that can_manage reveals permission links to descendants.

Test fails because #18865.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoCorrect company name.
Ward Vandewege [Thu, 24 Mar 2022 21:00:55 +0000 (17:00 -0400)]
Correct company name.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoAdd a citation file.
Ward Vandewege [Thu, 24 Mar 2022 21:00:15 +0000 (17:00 -0400)]
Add a citation file.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoUpdate upgrading notes for pending 2.4.0 release refs #18701
Peter Amstutz [Thu, 24 Mar 2022 18:57:21 +0000 (14:57 -0400)]
Update upgrading notes for pending 2.4.0 release refs #18701

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18638-noisy-errors-regarding-tests'
Javier Bértoli [Thu, 24 Mar 2022 18:44:43 +0000 (15:44 -0300)]
Merge branch '18638-noisy-errors-regarding-tests'

closes #18638
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18638: Address review comments
Javier Bértoli [Thu, 24 Mar 2022 17:56:33 +0000 (14:56 -0300)]
18638: Address review comments

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years agoMerge branch '18596-preemptible-price-factor'
Tom Clegg [Thu, 24 Mar 2022 15:26:44 +0000 (11:26 -0400)]
Merge branch '18596-preemptible-price-factor'

closes #18596

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '18633-install-sudo-passwordless-in-shell'
Javier Bértoli [Thu, 24 Mar 2022 13:27:05 +0000 (10:27 -0300)]
Merge branch '18633-install-sudo-passwordless-in-shell'

closes #18633
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18631: add login-sync cron to provision script
Javier Bértoli [Wed, 23 Mar 2022 22:39:09 +0000 (19:39 -0300)]
18631: add login-sync cron to provision script

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18865: Test visibility of user->collection permission links.
Tom Clegg [Wed, 23 Mar 2022 20:05:02 +0000 (16:05 -0400)]
18865: Test visibility of user->collection permission links.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18903: keep-web: when logging a file upload or download, if the
Ward Vandewege [Wed, 23 Mar 2022 18:08:09 +0000 (14:08 -0400)]
18903: keep-web: when logging a file upload or download, if the
       collection UUID is not known, blank the field rather than
       populating it with the PDH (which is also present in a separate
       field).

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: formatting fix for output: always prepend the event timestamp
Ward Vandewege [Wed, 23 Mar 2022 17:04:48 +0000 (13:04 -0400)]
18903: formatting fix for output: always prepend the event timestamp

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: the user activity script needs to look up collections by PDH, not
Ward Vandewege [Wed, 23 Mar 2022 16:07:51 +0000 (12:07 -0400)]
18903: the user activity script needs to look up collections by PDH, not
       UUID (that field is not always populated with a UUID).

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18903: fix uninitialized user object in the user activity script.
Ward Vandewege [Wed, 23 Mar 2022 15:00:08 +0000 (11:00 -0400)]
18903: fix uninitialized user object in the user activity script.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18596: Fix test case to catch up with new default config.
Tom Clegg [Wed, 23 Mar 2022 14:36:30 +0000 (10:36 -0400)]
18596: Fix test case to catch up with new default config.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>