arvados.git
11 years agofix formatting
Tom Clegg [Fri, 14 Jun 2013 20:41:49 +0000 (16:41 -0400)]
fix formatting

11 years agoadd unverified SSL certificate note
Tom Clegg [Fri, 14 Jun 2013 20:40:50 +0000 (16:40 -0400)]
add unverified SSL certificate note

11 years agofix up formatting
Tom Clegg [Fri, 14 Jun 2013 20:38:53 +0000 (16:38 -0400)]
fix up formatting

11 years agoupdate cli sdk doc, tweak json output options
Tom Clegg [Fri, 14 Jun 2013 20:37:13 +0000 (16:37 -0400)]
update cli sdk doc, tweak json output options

11 years agorename secret_token.rb -> secret_token.rb.example
Tom Clegg [Fri, 14 Jun 2013 19:44:39 +0000 (15:44 -0400)]
rename secret_token.rb -> secret_token.rb.example

11 years agoupdate "application name" identifier
Tom Clegg [Fri, 14 Jun 2013 15:42:11 +0000 (11:42 -0400)]
update "application name" identifier

11 years agorename wh to arv
Tom Clegg [Fri, 14 Jun 2013 15:40:32 +0000 (11:40 -0400)]
rename wh to arv

11 years agofix up wh tool
Tom Clegg [Fri, 14 Jun 2013 15:40:11 +0000 (11:40 -0400)]
fix up wh tool

11 years agofix up load_where_param
Tom Clegg [Fri, 14 Jun 2013 15:39:41 +0000 (11:39 -0400)]
fix up load_where_param

11 years agoadd tutorials and references to home page
Tom Clegg [Thu, 13 Jun 2013 19:30:55 +0000 (15:30 -0400)]
add tutorials and references to home page

11 years agoadd front page dashboard
Tom Clegg [Wed, 12 Jun 2013 18:53:43 +0000 (14:53 -0400)]
add front page dashboard

11 years agoadd repositories#get_all_permissions
Tom Clegg [Wed, 12 Jun 2013 04:40:49 +0000 (00:40 -0400)]
add repositories#get_all_permissions

11 years agomove authorized_keys#get_all_logins to virtual_machines#get_all_logins
Tom Clegg [Wed, 12 Jun 2013 04:38:39 +0000 (00:38 -0400)]
move authorized_keys#get_all_logins to virtual_machines#get_all_logins

11 years agoimprove error reporting
Tom Clegg [Wed, 12 Jun 2013 04:37:38 +0000 (00:37 -0400)]
improve error reporting

11 years agoinclude csrf token with x-editable ajax
Tom Clegg [Wed, 12 Jun 2013 04:37:14 +0000 (00:37 -0400)]
include csrf token with x-editable ajax

11 years agoshow cli update example on generic object#get page
Tom Clegg [Tue, 11 Jun 2013 21:35:46 +0000 (17:35 -0400)]
show cli update example on generic object#get page

11 years agoadd user->repo permission to cheat sheet
Tom Clegg [Tue, 11 Jun 2013 21:35:27 +0000 (17:35 -0400)]
add user->repo permission to cheat sheet

11 years agosmarten up authorized_keys#get_all_logins response
Tom Clegg [Tue, 11 Jun 2013 20:39:06 +0000 (16:39 -0400)]
smarten up authorized_keys#get_all_logins response

11 years agoremove less critical nav items
Tom Clegg [Tue, 11 Jun 2013 20:38:36 +0000 (16:38 -0400)]
remove less critical nav items

11 years agoMore layout fixes.
Ward Vandewege [Tue, 11 Jun 2013 20:26:30 +0000 (16:26 -0400)]
More layout fixes.

11 years agoLayout fixes.
Ward Vandewege [Tue, 11 Jun 2013 20:21:32 +0000 (16:21 -0400)]
Layout fixes.

11 years agoFix title for workbench install instructions.
Ward Vandewege [Tue, 11 Jun 2013 20:20:01 +0000 (16:20 -0400)]
Fix title for workbench install instructions.

11 years agoMerge branch 'master' of git.clinicalfuture.com:arvados
Ward Vandewege [Tue, 11 Jun 2013 20:18:35 +0000 (16:18 -0400)]
Merge branch 'master' of git.clinicalfuture.com:arvados

11 years agoalways clear thread.current session info
Tom Clegg [Tue, 11 Jun 2013 20:19:21 +0000 (16:19 -0400)]
always clear thread.current session info

11 years agoAdd workbench install instructions.
Ward Vandewege [Tue, 11 Jun 2013 20:18:26 +0000 (16:18 -0400)]
Add workbench install instructions.

11 years agoDelete apps/workbench capistrano files; they have been moved to a
Ward Vandewege [Tue, 11 Jun 2013 18:32:30 +0000 (14:32 -0400)]
Delete apps/workbench capistrano files; they have been moved to a
separate repository.

11 years agoWhitespace.
Ward Vandewege [Tue, 11 Jun 2013 18:32:00 +0000 (14:32 -0400)]
Whitespace.

11 years agoBe more explicit.
Ward Vandewege [Tue, 11 Jun 2013 17:39:42 +0000 (13:39 -0400)]
Be more explicit.

11 years agoFormatting fix
Ward Vandewege [Tue, 11 Jun 2013 17:28:18 +0000 (13:28 -0400)]
Formatting fix

11 years agoadd Repositories resource, fix authorized_user attr name, some wb fixes
Tom Clegg [Tue, 11 Jun 2013 17:00:06 +0000 (13:00 -0400)]
add Repositories resource, fix authorized_user attr name, some wb fixes

11 years agoMore API server installation instructions.
Ward Vandewege [Tue, 11 Jun 2013 15:49:34 +0000 (11:49 -0400)]
More API server installation instructions.

11 years agoRemove reference to orvosapi.com, replaced with arvadosapi.com
Ward Vandewege [Tue, 11 Jun 2013 15:10:49 +0000 (11:10 -0400)]
Remove reference to orvosapi.com, replaced with arvadosapi.com

11 years agoDelete capistrano files; they have been moved to a separate repository.
Ward Vandewege [Tue, 11 Jun 2013 14:28:22 +0000 (10:28 -0400)]
Delete capistrano files; they have been moved to a separate repository.

11 years agoadd /authorized_keys/get_all_logins
Tom Clegg [Mon, 10 Jun 2013 19:30:38 +0000 (15:30 -0400)]
add /authorized_keys/get_all_logins

11 years agofix current_user in model
Tom Clegg [Mon, 10 Jun 2013 18:21:33 +0000 (14:21 -0400)]
fix current_user in model

11 years agodo not render attributes of non-owned objects with x-editable
Tom Clegg [Mon, 10 Jun 2013 00:46:32 +0000 (20:46 -0400)]
do not render attributes of non-owned objects with x-editable

11 years agoadd links#index, allow non-admin links#show
Tom Clegg [Mon, 10 Jun 2013 00:42:04 +0000 (20:42 -0400)]
add links#index, allow non-admin links#show

11 years agoadd users#index, allow non-admin users#show
Tom Clegg [Mon, 10 Jun 2013 00:31:20 +0000 (20:31 -0400)]
add users#index, allow non-admin users#show

11 years agoinclude links that reference me in links#index
Tom Clegg [Mon, 10 Jun 2013 00:24:44 +0000 (20:24 -0400)]
include links that reference me in links#index

11 years agoexpose Keys, VMs, Jobs tabs to non-admin users
Tom Clegg [Sun, 9 Jun 2013 20:03:14 +0000 (16:03 -0400)]
expose Keys, VMs, Jobs tabs to non-admin users

11 years agoadd admin cheat sheet
Tom Clegg [Sun, 9 Jun 2013 19:47:57 +0000 (15:47 -0400)]
add admin cheat sheet

11 years agoinclude indivually permitted objects in #index responses
Tom Clegg [Sun, 9 Jun 2013 18:41:58 +0000 (14:41 -0400)]
include indivually permitted objects in #index responses

11 years agoadd VirtualMachine resource to workbench
Tom Clegg [Sat, 8 Jun 2013 06:04:42 +0000 (02:04 -0400)]
add VirtualMachine resource to workbench

11 years agoadd VirtualMachine resource
Tom Clegg [Sat, 8 Jun 2013 05:58:29 +0000 (01:58 -0400)]
add VirtualMachine resource

11 years agofix redirect/error behavior for session timeouts
Tom Clegg [Sat, 8 Jun 2013 05:26:46 +0000 (01:26 -0400)]
fix redirect/error behavior for session timeouts

11 years agomore x-editable
Tom Clegg [Fri, 7 Jun 2013 22:02:04 +0000 (18:02 -0400)]
more x-editable

11 years agoadd insecure-https config option, improve error reporting
Tom Clegg [Fri, 7 Jun 2013 22:01:19 +0000 (18:01 -0400)]
add insecure-https config option, improve error reporting

11 years agoimplement destroy method in arvados model proxy
Tom Clegg [Fri, 7 Jun 2013 05:16:06 +0000 (01:16 -0400)]
implement destroy method in arvados model proxy

11 years agofix up editable stuff
Tom Clegg [Fri, 7 Jun 2013 05:11:29 +0000 (01:11 -0400)]
fix up editable stuff

11 years agoadd andand
Tom Clegg [Fri, 7 Jun 2013 05:10:54 +0000 (01:10 -0400)]
add andand

11 years agomake authorized_keys editable on index page
Tom Clegg [Fri, 7 Jun 2013 03:41:45 +0000 (23:41 -0400)]
make authorized_keys editable on index page

11 years agotweak authorized_key#new
Tom Clegg [Thu, 6 Jun 2013 22:44:21 +0000 (18:44 -0400)]
tweak authorized_key#new

11 years agoadd authorized_keys views and editable fields
Tom Clegg [Thu, 6 Jun 2013 22:19:52 +0000 (18:19 -0400)]
add authorized_keys views and editable fields

11 years agoupdate bundle, bring in bootstrap-editable
Tom Clegg [Thu, 6 Jun 2013 21:46:13 +0000 (17:46 -0400)]
update bundle, bring in bootstrap-editable

11 years agoadd authorized_keys
Tom Clegg [Thu, 6 Jun 2013 19:37:15 +0000 (15:37 -0400)]
add authorized_keys

11 years agoadd AuthorizedKey resource
Tom Clegg [Thu, 6 Jun 2013 18:49:43 +0000 (14:49 -0400)]
add AuthorizedKey resource

11 years agofix logging of script_parameters and resource_limits
Tom Clegg [Thu, 6 Jun 2013 16:58:07 +0000 (12:58 -0400)]
fix logging of script_parameters and resource_limits

11 years agouse gmtime instead of unixtime to report timestamps
Tom Clegg [Thu, 6 Jun 2013 15:19:36 +0000 (11:19 -0400)]
use gmtime instead of unixtime to report timestamps

11 years agocheck validity of script_version during job#update
Tom Clegg [Thu, 6 Jun 2013 15:18:38 +0000 (11:18 -0400)]
check validity of script_version during job#update

11 years agocheck child exit status
Tom Clegg [Thu, 6 Jun 2013 15:17:59 +0000 (11:17 -0400)]
check child exit status

11 years agotweak node failure detection
Tom Clegg [Wed, 5 Jun 2013 20:50:41 +0000 (16:50 -0400)]
tweak node failure detection

11 years agouse IPC::System::Simple::capturex instead of system()
Tom Clegg [Wed, 5 Jun 2013 20:46:52 +0000 (16:46 -0400)]
use IPC::System::Simple::capturex instead of system()

11 years agofix "is undef" test
Tom Clegg [Wed, 5 Jun 2013 20:46:31 +0000 (16:46 -0400)]
fix "is undef" test

11 years agofix up quoting
Tom Clegg [Wed, 5 Jun 2013 18:15:30 +0000 (14:15 -0400)]
fix up quoting

11 years agofix job output hash key
Tom Clegg [Wed, 5 Jun 2013 18:15:17 +0000 (14:15 -0400)]
fix job output hash key

11 years agoremove old cruft
Tom Clegg [Tue, 4 Jun 2013 17:47:55 +0000 (13:47 -0400)]
remove old cruft

11 years agoretry requests after BadStatusLine
Tom Clegg [Tue, 4 Jun 2013 17:34:16 +0000 (13:34 -0400)]
retry requests after BadStatusLine

11 years agorun job tasks in qsequence order in first pass
Tom Clegg [Tue, 4 Jun 2013 16:42:48 +0000 (12:42 -0400)]
run job tasks in qsequence order in first pass

11 years agoadd "order" parameter to discovery document
Tom Clegg [Tue, 4 Jun 2013 16:41:58 +0000 (12:41 -0400)]
add "order" parameter to discovery document

11 years agoreject API calls with unsupported parameters
Tom Clegg [Tue, 4 Jun 2013 16:41:14 +0000 (12:41 -0400)]
reject API calls with unsupported parameters

11 years agofix job_task update call
Tom Clegg [Mon, 3 Jun 2013 20:06:17 +0000 (16:06 -0400)]
fix job_task update call

11 years agorename outputkey to output
Tom Clegg [Mon, 3 Jun 2013 19:53:12 +0000 (15:53 -0400)]
rename outputkey to output

11 years agoignore client-provided kind and etag during update
Tom Clegg [Mon, 3 Jun 2013 19:52:30 +0000 (15:52 -0400)]
ignore client-provided kind and etag during update

11 years agoRemove unique from hostname index in nodes table.
Ward Vandewege [Tue, 28 May 2013 17:44:20 +0000 (13:44 -0400)]
Remove unique from hostname index in nodes table.

11 years agoExpose Node slot_number via api.
Ward Vandewege [Tue, 28 May 2013 17:17:19 +0000 (13:17 -0400)]
Expose Node slot_number via api.

11 years agocrunch-job fixes
Tom Clegg [Fri, 24 May 2013 10:07:12 +0000 (03:07 -0700)]
crunch-job fixes

11 years agoadd "where" param to discovery doc
Tom Clegg [Fri, 24 May 2013 10:06:43 +0000 (03:06 -0700)]
add "where" param to discovery doc

11 years agoremove lockfile
Tom Clegg [Fri, 24 May 2013 10:05:54 +0000 (03:05 -0700)]
remove lockfile

11 years agosupply entire client-provided object if discovery doc does not describe structure
Tom Clegg [Fri, 24 May 2013 10:04:27 +0000 (03:04 -0700)]
supply entire client-provided object if discovery doc does not describe structure

11 years agodrop shim for errant discovery doc
Tom Clegg [Fri, 24 May 2013 10:03:13 +0000 (03:03 -0700)]
drop shim for errant discovery doc

11 years agonote created_by_job_task when queueing new tasks
Tom Clegg [Fri, 24 May 2013 04:49:07 +0000 (21:49 -0700)]
note created_by_job_task when queueing new tasks

11 years agofix job_task qsequence and delete_all usage
Tom Clegg [Fri, 24 May 2013 04:38:06 +0000 (21:38 -0700)]
fix job_task qsequence and delete_all usage

11 years agofix empty-string error report
Tom Clegg [Fri, 24 May 2013 04:37:07 +0000 (21:37 -0700)]
fix empty-string error report

11 years agoRuby SDK: add gem dependencies
Ward Vandewege [Thu, 23 May 2013 19:47:45 +0000 (15:47 -0400)]
Ruby SDK: add gem dependencies

11 years agoRuby SDK: add sufficient files to make an Arvados gem.
Ward Vandewege [Thu, 23 May 2013 19:19:03 +0000 (15:19 -0400)]
Ruby SDK: add sufficient files to make an Arvados gem.

11 years agoRuby SDK: make suppressing SSL warnings a configurable option rather
Ward Vandewege [Thu, 23 May 2013 18:34:20 +0000 (14:34 -0400)]
Ruby SDK: make suppressing SSL warnings a configurable option rather
than a hack based on hostname.

11 years agoMore install instructions.
Ward Vandewege [Thu, 23 May 2013 17:15:14 +0000 (13:15 -0400)]
More install instructions.

11 years agostart lifting job manager over from free factories to crunch
Tom Clegg [Thu, 23 May 2013 06:47:53 +0000 (23:47 -0700)]
start lifting job manager over from free factories to crunch

11 years agoadd job_task attributes
Tom Clegg [Thu, 23 May 2013 06:03:14 +0000 (23:03 -0700)]
add job_task attributes

11 years agofix sym/string comparisons
Tom Clegg [Thu, 23 May 2013 04:13:00 +0000 (21:13 -0700)]
fix sym/string comparisons

11 years agomove queue and system user logic out of dispatch_jobs
Tom Clegg [Wed, 22 May 2013 19:14:52 +0000 (12:14 -0700)]
move queue and system user logic out of dispatch_jobs

11 years agoadd /arvados/v1/jobs/queue
Tom Clegg [Wed, 22 May 2013 19:10:23 +0000 (12:10 -0700)]
add /arvados/v1/jobs/queue

11 years agosupport order param
Tom Clegg [Wed, 22 May 2013 18:49:52 +0000 (11:49 -0700)]
support order param

11 years agoimprove error messages
Tom Clegg [Wed, 22 May 2013 18:36:06 +0000 (11:36 -0700)]
improve error messages

11 years agosupport filters like where={"attribute":null}
Tom Clegg [Wed, 22 May 2013 18:35:26 +0000 (11:35 -0700)]
support filters like where={"attribute":null}

11 years agoadd script/update_node_attributes.rb
Tom Clegg [Tue, 21 May 2013 20:33:24 +0000 (13:33 -0700)]
add script/update_node_attributes.rb

11 years agoAdd (rudimentary) install instructions for the API server.
Ward Vandewege [Tue, 21 May 2013 20:21:24 +0000 (16:21 -0400)]
Add (rudimentary) install instructions for the API server.

11 years agoadd properties to pipeline_instance api response
Tom Clegg [Thu, 16 May 2013 03:23:00 +0000 (20:23 -0700)]
add properties to pipeline_instance api response

11 years agofix response type for #index
Tom Clegg [Thu, 16 May 2013 03:22:33 +0000 (20:22 -0700)]
fix response type for #index

11 years agocatch and propagate errors during #update
Tom Clegg [Thu, 16 May 2013 03:21:34 +0000 (20:21 -0700)]
catch and propagate errors during #update