arvados.git
7 years agoApply a few gofmt -s fixes.
Ward Vandewege [Wed, 6 Sep 2017 14:49:51 +0000 (10:49 -0400)]
Apply a few gofmt -s fixes.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years agoMerge branch '12212-aws-instance-profile'
Lucas Di Pentima [Tue, 5 Sep 2017 21:02:04 +0000 (18:02 -0300)]
Merge branch '12212-aws-instance-profile'
refs #12212

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12212: Added example on web documentation
Lucas Di Pentima [Tue, 5 Sep 2017 19:45:59 +0000 (16:45 -0300)]
12212: Added example on web documentation

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years agoMerge branch '12190-s3-read-after-write'
Tom Clegg [Tue, 5 Sep 2017 19:39:57 +0000 (15:39 -0400)]
Merge branch '12190-s3-read-after-write'

refs #12190

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12190: Don't test block existence before first write.
Tom Clegg [Mon, 4 Sep 2017 20:42:08 +0000 (16:42 -0400)]
12190: Don't test block existence before first write.

"Amazon S3 provides read-after-write consistency for PUTS of new
objects in your S3 bucket in all regions with one caveat. The caveat
is that if you make a HEAD or GET request to the key name (to find if
the object exists) before creating the object, Amazon S3 provides
eventual consistency for read-after-write."

-- http://docs.aws.amazon.com/AmazonS3/latest/dev/Introduction.html#ConsistencyModel

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12212: Adding configuration example for apllying instance profiles to created
Lucas Di Pentima [Mon, 4 Sep 2017 15:43:58 +0000 (12:43 -0300)]
12212: Adding configuration example for apllying instance profiles to created
computed nodes.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12055: Merge branch '12055-nodemanager-ec2-tags'
Lucas Di Pentima [Fri, 1 Sep 2017 22:03:51 +0000 (19:03 -0300)]
12055: Merge branch '12055-nodemanager-ec2-tags'
Closes #12055

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12055: Avoid RAM exhaustion on bootup by asking AWS only the AMI
Lucas Di Pentima [Fri, 1 Sep 2017 20:06:54 +0000 (17:06 -0300)]
12055: Avoid RAM exhaustion on bootup by asking AWS only the AMI
list owned by 'self'. refs #9223 #12163

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years agoMerge branch '12134-llfuse-patch'
Tom Clegg [Fri, 1 Sep 2017 15:29:46 +0000 (11:29 -0400)]
Merge branch '12134-llfuse-patch'

refs #12134

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12055: Merge branch 'master' into 12055-nodemanager-ec2-tags
Lucas Di Pentima [Thu, 31 Aug 2017 20:16:02 +0000 (17:16 -0300)]
12055: Merge branch 'master' into 12055-nodemanager-ec2-tags

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12055: Updated dev version number & dependency scripts
Lucas Di Pentima [Thu, 31 Aug 2017 20:15:16 +0000 (17:15 -0300)]
12055: Updated dev version number & dependency scripts

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years agoMerge branch '11898-no-distinct'
Tom Clegg [Wed, 30 Aug 2017 13:30:57 +0000 (09:30 -0400)]
Merge branch '11898-no-distinct'

refs #11898

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12055: Changed nodemanager's libcloud dependency to use our v2.2
Lucas Di Pentima [Wed, 30 Aug 2017 11:10:47 +0000 (08:10 -0300)]
12055: Changed nodemanager's libcloud dependency to use our v2.2
fork.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years agoWorkbench: when showing the detail for script_parameters in the pipeline
Ward Vandewege [Wed, 30 Aug 2017 01:09:04 +0000 (21:09 -0400)]
Workbench: when showing the detail for script_parameters in the pipeline
instance or work unit view, do not limit that field to half the screen
for no reason.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years ago12134: Minimize multiprocessing worker startups.
Tom Clegg [Fri, 18 Aug 2017 19:43:49 +0000 (15:43 -0400)]
12134: Minimize multiprocessing worker startups.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12134: Use fixed/unreleased llfuse in test suite.
Tom Clegg [Thu, 17 Aug 2017 15:41:07 +0000 (11:41 -0400)]
12134: Use fixed/unreleased llfuse in test suite.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoMerge branch 'master' into 11898-no-distinct
Tom Clegg [Tue, 29 Aug 2017 05:30:11 +0000 (01:30 -0400)]
Merge branch 'master' into 11898-no-distinct

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years agoBump cwltool to eliminate nameext/nameroot in output. refs #12100
Peter Amstutz [Mon, 28 Aug 2017 13:57:57 +0000 (09:57 -0400)]
Bump cwltool to eliminate nameext/nameroot in output.  refs #12100

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years agoUpdate test to match new log message.
Tom Clegg [Tue, 22 Aug 2017 15:30:38 +0000 (11:30 -0400)]
Update test to match new log message.

refs #11309

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years agoMerge branch '12123-ws-unsubscribe'
Tom Clegg [Fri, 18 Aug 2017 19:46:07 +0000 (15:46 -0400)]
Merge branch '12123-ws-unsubscribe'

refs #12123

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years agoMerge branch '11309-crunchstat-summary-containers'
Tom Clegg [Fri, 18 Aug 2017 18:26:48 +0000 (14:26 -0400)]
Merge branch '11309-crunchstat-summary-containers'

refs #11309

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago11283: Update api server's arvados gems.
Tom Clegg [Fri, 18 Aug 2017 17:35:39 +0000 (13:35 -0400)]
11283: Update api server's arvados gems.

refs #11283

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago11309: Fix NewSummarizer()'s ability to accept a loaded API record.
Tom Clegg [Fri, 18 Aug 2017 14:37:02 +0000 (10:37 -0400)]
11309: Fix NewSummarizer()'s ability to accept a loaded API record.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago11309: Fix mocked API data to pass test.
Tom Clegg [Fri, 18 Aug 2017 14:28:39 +0000 (10:28 -0400)]
11309: Fix mocked API data to pass test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12123: Subscribe before unsubscribing to avoid losing messages.
Tom Clegg [Thu, 17 Aug 2017 19:38:17 +0000 (15:38 -0400)]
12123: Subscribe before unsubscribing to avoid losing messages.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years ago12123: Implement "unsubscribe" method.
Tom Clegg [Thu, 17 Aug 2017 19:27:59 +0000 (15:27 -0400)]
12123: Implement "unsubscribe" method.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years agoMerge branch '12123-arv-ws-keyerror'
Tom Clegg [Thu, 17 Aug 2017 18:50:54 +0000 (14:50 -0400)]
Merge branch '12123-arv-ws-keyerror'

refs #12123

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

7 years agoUpdate cwltest package to latest so conformance tests pass no issue #
Peter Amstutz [Thu, 17 Aug 2017 17:52:50 +0000 (13:52 -0400)]
Update cwltest package to latest so conformance tests pass no issue #

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years agoMerge branch '12081-crunch-job-retry'
Tom Clegg [Thu, 17 Aug 2017 17:16:36 +0000 (13:16 -0400)]
Merge branch '12081-crunch-job-retry'

refs #12080
refs #12081
refs #12108

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12134: Revert "10805: Skip llfuse.close() to avoid llfuse deadlocks in test suite."
Tom Clegg [Thu, 17 Aug 2017 14:46:19 +0000 (10:46 -0400)]
12134: Revert "10805: Skip llfuse.close() to avoid llfuse deadlocks in test suite."

This reverts commit 07cd679b6526fcc9f2d3295f10751906e91872c9.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12081: Retry "update" API when called via ResourceProxy->save.
Tom Clegg [Wed, 16 Aug 2017 22:18:38 +0000 (18:18 -0400)]
12081: Retry "update" API when called via ResourceProxy->save.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12123: Don't expect properties.new_attributes.components in events.
Tom Clegg [Wed, 16 Aug 2017 21:19:13 +0000 (17:19 -0400)]
12123: Don't expect properties.new_attributes.components in events.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoMerge branch '12122-rails-groups-assets-fix'
Ward Vandewege [Wed, 16 Aug 2017 20:13:57 +0000 (16:13 -0400)]
Merge branch '12122-rails-groups-assets-fix'

closes #12122

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years agoFor now remove the call to rake npm:install from arvbox, it depends on
Ward Vandewege [Wed, 16 Aug 2017 20:10:59 +0000 (16:10 -0400)]
For now remove the call to rake npm:install from arvbox, it depends on
the multisite search branch (12033-multisite-search) and will be
included when that is merged.

refs #12122

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years agoWorkbench shouldn't error out when config files are missing if
Ward Vandewege [Wed, 16 Aug 2017 17:07:32 +0000 (13:07 -0400)]
Workbench shouldn't error out when config files are missing if
RAILS_GROUP is set and includes 'assets'.

refs #12122

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years agoMerge branch '11898-no-distinct'
Tom Clegg [Wed, 16 Aug 2017 17:06:05 +0000 (13:06 -0400)]
Merge branch '11898-no-distinct'

refs #11898

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11898: Remove superfluous uniq(&:id) call
Tom Clegg [Fri, 23 Jun 2017 19:17:23 +0000 (15:17 -0400)]
11898: Remove superfluous uniq(&:id) call

Avoids adding DISTINCT to SQL query, which causes Postgres to do
expensive things.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoMerge branch '8937-arvput-cached-tokens'
Lucas Di Pentima [Wed, 16 Aug 2017 16:29:43 +0000 (13:29 -0300)]
Merge branch '8937-arvput-cached-tokens'
Closes #8937

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12055: Code simplification.
Lucas Di Pentima [Wed, 16 Aug 2017 16:22:15 +0000 (13:22 -0300)]
12055: Code simplification.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years agoMake it a little more obvious which arvbox docker images are being built.
Ward Vandewege [Wed, 16 Aug 2017 15:26:25 +0000 (11:26 -0400)]
Make it a little more obvious which arvbox docker images are being built.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years ago12055: Merge branch 'master' into 12055-nodemanager-ec2-tags
Lucas Di Pentima [Wed, 16 Aug 2017 15:20:38 +0000 (12:20 -0300)]
12055: Merge branch 'master' into 12055-nodemanager-ec2-tags

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago11309: Sort containers by request time.
Tom Clegg [Wed, 16 Aug 2017 14:40:51 +0000 (10:40 -0400)]
11309: Sort containers by request time.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11309: Fix runtime_constraints suggestions for containers.
Tom Clegg [Wed, 16 Aug 2017 14:32:38 +0000 (10:32 -0400)]
11309: Fix runtime_constraints suggestions for containers.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12055: Updated fake driver to make integration tests work again.
Lucas Di Pentima [Wed, 16 Aug 2017 03:52:56 +0000 (00:52 -0300)]
12055: Updated fake driver to make integration tests work again.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago12055: On EC2 driver, pass the tag list to the node_create call
Lucas Di Pentima [Wed, 16 Aug 2017 01:58:59 +0000 (22:58 -0300)]
12055: On EC2 driver, pass the tag list to the node_create call
instead of assigning them after creation.
Updated tests.
Bumped libcloud fork dependency to 0.20.2.dev4, which has the
necessary updates to pass TagSpecification parameters to Amazon API
create call.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago11309: Drop parent container name from labels.
Tom Clegg [Tue, 15 Aug 2017 22:50:10 +0000 (18:50 -0400)]
11309: Drop parent container name from labels.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11309: Prefix errors with "notice:" or "warning:" to aid parsing.
Tom Clegg [Tue, 15 Aug 2017 20:29:48 +0000 (16:29 -0400)]
11309: Prefix errors with "notice:" or "warning:" to aid parsing.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11309: Fix parsing and labels. Add --threads option.
Tom Clegg [Tue, 15 Aug 2017 20:26:18 +0000 (16:26 -0400)]
11309: Fix parsing and labels. Add --threads option.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11309: 9001: Fix catch-all-exceptions antipattern.
Tom Clegg [Tue, 15 Aug 2017 15:21:44 +0000 (11:21 -0400)]
11309: 9001: Fix catch-all-exceptions antipattern.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago8937: Token expiration is already being checked, removed cache
Lucas Di Pentima [Tue, 15 Aug 2017 14:37:53 +0000 (11:37 -0300)]
8937: Token expiration is already being checked, removed cache
validation method and updated integration test.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

7 years ago11309: Accommodate crunch2 crunchstat log format.
Tom Clegg [Mon, 14 Aug 2017 20:40:55 +0000 (16:40 -0400)]
11309: Accommodate crunch2 crunchstat log format.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoarvbox installs nodejs and sets up workbench js assets. refs #12033
Peter Amstutz [Mon, 14 Aug 2017 17:17:55 +0000 (13:17 -0400)]
arvbox installs nodejs and sets up workbench js assets.  refs #12033

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years ago11309: Recognize containers and container requests by UUID infix.
Tom Clegg [Fri, 11 Aug 2017 21:52:42 +0000 (17:52 -0400)]
11309: Recognize containers and container requests by UUID infix.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoBump cwltool for python-requests dependency fix refs #12100
Peter Amstutz [Fri, 11 Aug 2017 20:02:59 +0000 (16:02 -0400)]
Bump cwltool for python-requests dependency fix refs #12100

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years agoFix typo.
Ward Vandewege [Fri, 11 Aug 2017 18:46:12 +0000 (14:46 -0400)]
Fix typo.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

7 years agoMerge branch '11545-stress-test' closes #11545
Peter Amstutz [Fri, 11 Aug 2017 17:58:00 +0000 (13:58 -0400)]
Merge branch '11545-stress-test' closes #11545

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years agoUpdate test to reflect slight change in cwltool packing behavior. refs #12100
Peter Amstutz [Fri, 11 Aug 2017 17:45:33 +0000 (13:45 -0400)]
Update test to reflect slight change in cwltool packing behavior.  refs #12100

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years agoMerge branch '12100-cwltool-update' closes #12100
Peter Amstutz [Fri, 11 Aug 2017 15:10:11 +0000 (11:10 -0400)]
Merge branch '12100-cwltool-update' closes #12100

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

7 years ago12100: Bump cwltool for v1.0.2 secondaryFile handling.
Peter Amstutz [Wed, 9 Aug 2017 20:30:19 +0000 (16:30 -0400)]
12100: Bump cwltool for v1.0.2 secondaryFile handling.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago8937: Refactored _cache_is_valid() to catch specific exceptions. Fixed
Lucas Di Pentima [Thu, 10 Aug 2017 21:26:23 +0000 (18:26 -0300)]
8937: Refactored _cache_is_valid() to catch specific exceptions. Fixed
related test.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago8937: Merge branch 'master' into 8937-arvput-cached-tokens
Lucas Di Pentima [Thu, 10 Aug 2017 20:03:29 +0000 (17:03 -0300)]
8937: Merge branch 'master' into 8937-arvput-cached-tokens

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Fixed workbench package building scripts.
Lucas Di Pentima [Thu, 10 Aug 2017 19:03:37 +0000 (16:03 -0300)]
11167: Fixed workbench package building scripts.
Refs #11167

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years agoMerge branch '11167-wb-remove-arvget'
Lucas Di Pentima [Thu, 10 Aug 2017 13:27:49 +0000 (10:27 -0300)]
Merge branch '11167-wb-remove-arvget'
Closes #11167

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Revert removing ActionController::Live from collections controller
Lucas Di Pentima [Thu, 10 Aug 2017 11:49:09 +0000 (08:49 -0300)]
11167: Revert removing ActionController::Live from collections controller

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Removing unnecessary ActionController::Live from collections controller.
Lucas Di Pentima [Wed, 9 Aug 2017 23:52:47 +0000 (20:52 -0300)]
11167: Removing unnecessary ActionController::Live from collections controller.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Merge branch 'master' into 11167-wb-remove-arvget
Lucas Di Pentima [Wed, 9 Aug 2017 23:49:39 +0000 (20:49 -0300)]
11167: Merge branch 'master' into 11167-wb-remove-arvget

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago8937: Added cache validation method to arv-put. For now it only
Lucas Di Pentima [Wed, 9 Aug 2017 23:14:07 +0000 (20:14 -0300)]
8937: Added cache validation method to arv-put. For now it only
checks that the first signed block's locator is valid.
Added integration test.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years agoMerge branch '11925-nodemanager-watchdog-test' refs #11925
Peter Amstutz [Wed, 9 Aug 2017 19:11:35 +0000 (15:11 -0400)]
Merge branch '11925-nodemanager-watchdog-test' refs #11925

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years agoMerge branch '12093-cwl-project-uuid' closes #12093
Peter Amstutz [Wed, 9 Aug 2017 18:38:14 +0000 (14:38 -0400)]
Merge branch '12093-cwl-project-uuid' closes #12093

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago12093: Propagate --project-uuid to runner job inside container.
Peter Amstutz [Wed, 9 Aug 2017 18:09:33 +0000 (14:09 -0400)]
12093: Propagate --project-uuid to runner job inside container.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years agoMerge branch '12087-ws-busy-loop'
Tom Clegg [Wed, 9 Aug 2017 13:40:53 +0000 (09:40 -0400)]
Merge branch '12087-ws-busy-loop'

closes #12087

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11167: Added visual studio code control dir to gitignore
Lucas Di Pentima [Wed, 9 Aug 2017 13:30:19 +0000 (10:30 -0300)]
11167: Added visual studio code control dir to gitignore

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Removed unnecessary conditional
Lucas Di Pentima [Tue, 8 Aug 2017 20:26:35 +0000 (17:26 -0300)]
11167: Removed unnecessary conditional

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Fixed integration test by replacing the use of PhantomJS with
Lucas Di Pentima [Tue, 8 Aug 2017 19:53:32 +0000 (16:53 -0300)]
11167: Fixed integration test by replacing the use of PhantomJS with
Selenium, as the former wasn't returning all the expected response
headers.
Also, fixed the Range header used when asking for a partial log.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago12087: Exit "wait for low water mark" loop if session terminates.
Tom Clegg [Tue, 8 Aug 2017 17:04:17 +0000 (13:04 -0400)]
12087: Exit "wait for low water mark" loop if session terminates.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12087: Remove useless continue statement.
Tom Clegg [Tue, 8 Aug 2017 17:04:05 +0000 (13:04 -0400)]
12087: Remove useless continue statement.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12087: Don't report read/write errors on terminated sessions.
Tom Clegg [Tue, 8 Aug 2017 17:03:20 +0000 (13:03 -0400)]
12087: Don't report read/write errors on terminated sessions.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12087: Fixup some problems found by go vet.
Tom Clegg [Tue, 8 Aug 2017 16:26:06 +0000 (12:26 -0400)]
12087: Fixup some problems found by go vet.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12087: Fix up context cancel usage.
Tom Clegg [Tue, 8 Aug 2017 16:10:33 +0000 (12:10 -0400)]
12087: Fix up context cancel usage.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11167: Merge branch 'master' into 11167-wb-remove-arvget
Lucas Di Pentima [Mon, 7 Aug 2017 21:55:59 +0000 (18:55 -0300)]
11167: Merge branch 'master' into 11167-wb-remove-arvget

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Refactored tests to use new helper function.
Lucas Di Pentima [Mon, 7 Aug 2017 21:52:47 +0000 (18:52 -0300)]
11167: Refactored tests to use new helper function.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Added response header whitelisting needed when using CORS
Lucas Di Pentima [Mon, 7 Aug 2017 21:44:17 +0000 (18:44 -0300)]
11167: Added response header whitelisting needed when using CORS
request to fetch partial content.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Documented default keep_web_url setting on workbench config file.
Lucas Di Pentima [Mon, 7 Aug 2017 21:36:12 +0000 (18:36 -0300)]
11167: Documented default keep_web_url setting on workbench config file.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Added helper function to be used on collection access tests via keep-web
Lucas Di Pentima [Mon, 7 Aug 2017 21:34:15 +0000 (18:34 -0300)]
11167: Added helper function to be used on collection access tests via keep-web

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years ago11167: Removed conditional code
Lucas Di Pentima [Mon, 7 Aug 2017 21:02:52 +0000 (18:02 -0300)]
11167: Removed conditional code

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas@curoverse.com>

7 years agoMerge branch '12027-slurm-error-text'
Tom Clegg [Mon, 7 Aug 2017 17:47:34 +0000 (13:47 -0400)]
Merge branch '12027-slurm-error-text'

refs #12027

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12027: Recognize a new "node failed" error message.
Tom Clegg [Mon, 7 Aug 2017 13:58:04 +0000 (09:58 -0400)]
12027: Recognize a new "node failed" error message.

"srun: error: Cannot communicate with node 0.  Aborting job."

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoMerge branch '12078-perl-bool-params'
Tom Clegg [Fri, 4 Aug 2017 18:42:51 +0000 (14:42 -0400)]
Merge branch '12078-perl-bool-params'

refs #12078

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12078: Fix crash encoding booleans with libjson-perl 2.90.
Tom Clegg [Fri, 4 Aug 2017 18:30:08 +0000 (14:30 -0400)]
12078: Fix crash encoding booleans with libjson-perl 2.90.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11925: Two more tests wait for expected number of paired nodes.
Peter Amstutz [Thu, 3 Aug 2017 21:01:01 +0000 (17:01 -0400)]
11925: Two more tests wait for expected number of paired nodes.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago11925: More tests wait for expected number of paired nodes.
Peter Amstutz [Thu, 3 Aug 2017 20:45:35 +0000 (16:45 -0400)]
11925: More tests wait for expected number of paired nodes.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago11925: Add check for paired nodes, not just monitored nodes.
Peter Amstutz [Thu, 3 Aug 2017 20:29:50 +0000 (16:29 -0400)]
11925: Add check for paired nodes, not just monitored nodes.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago12024: Update help message.
Tom Clegg [Thu, 3 Aug 2017 19:54:54 +0000 (15:54 -0400)]
12024: Update help message.

refs #12024

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12024: Use vendor bundle when building Go packages.
Tom Clegg [Thu, 3 Aug 2017 19:07:48 +0000 (15:07 -0400)]
12024: Use vendor bundle when building Go packages.

refs #12024

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago11925: Explicitly join actor thread after stopping.
Peter Amstutz [Thu, 3 Aug 2017 18:57:41 +0000 (14:57 -0400)]
11925: Explicitly join actor thread after stopping.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago11925: Tweak test_node_pairing
Peter Amstutz [Thu, 3 Aug 2017 17:24:50 +0000 (13:24 -0400)]
11925: Tweak test_node_pairing

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years ago11925: Make unit tests more reliable.
Peter Amstutz [Thu, 3 Aug 2017 17:02:26 +0000 (13:02 -0400)]
11925: Make unit tests more reliable.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>

7 years agoMerge branch '12024-vendor-bundle-version'
Tom Clegg [Thu, 3 Aug 2017 15:00:34 +0000 (11:00 -0400)]
Merge branch '12024-vendor-bundle-version'

refs #12024

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years ago12024: Fix checksums in vendor.json.
Tom Clegg [Thu, 3 Aug 2017 14:56:57 +0000 (10:56 -0400)]
12024: Fix checksums in vendor.json.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

7 years agoMerge branch '12057-nodemanager-priority' closes #12057
Peter Amstutz [Wed, 2 Aug 2017 19:38:03 +0000 (15:38 -0400)]
Merge branch '12057-nodemanager-priority' closes #12057

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curoverse.com>