Tom Clegg [Thu, 12 Jun 2014 16:49:43 +0000 (12:49 -0400)]
2872: Fix selector in test case.
Tom Clegg [Thu, 12 Jun 2014 15:36:21 +0000 (11:36 -0400)]
2872: Add "move to project" button, fix "copy to project" behavior
(really copy, instead of adding a link).
Tom Clegg [Thu, 12 Jun 2014 15:35:28 +0000 (11:35 -0400)]
2872: Fix "remove" icon and pencil icon placement.
Tom Clegg [Thu, 12 Jun 2014 15:30:25 +0000 (11:30 -0400)]
2872: Muster all the "move" and "add" buttons up to the right side of the tabs.
Tom Clegg [Thu, 12 Jun 2014 15:29:01 +0000 (11:29 -0400)]
2872: Show projectless jobs/pipelines in "recent" list too.
Tom Clegg [Thu, 12 Jun 2014 14:40:00 +0000 (10:40 -0400)]
2872: Fix tests broken in merge.
Tom Clegg [Thu, 12 Jun 2014 03:57:37 +0000 (23:57 -0400)]
2872: Merge branch 'master' into 2872-folder-nav
Conflicts:
apps/workbench/app/assets/javascripts/pipeline_instances.js
apps/workbench/app/controllers/application_controller.rb
apps/workbench/app/controllers/collections_controller.rb
apps/workbench/app/controllers/jobs_controller.rb
apps/workbench/app/helpers/application_helper.rb
apps/workbench/app/models/job.rb
apps/workbench/app/views/application/_content.html.erb
apps/workbench/app/views/application/_show_metadata.html.erb
apps/workbench/app/views/pipeline_instances/_show_components.html.erb
Tom Clegg [Thu, 12 Jun 2014 03:31:41 +0000 (23:31 -0400)]
2872: Fix bookmark bar causing spurious window width.
radhika [Wed, 11 Jun 2014 16:30:24 +0000 (12:30 -0400)]
refs #2871
Merge branch '2871-preload-objects'
radhika [Wed, 11 Jun 2014 16:22:32 +0000 (12:22 -0400)]
2871: fix the typo caught by integration test
radhika [Wed, 11 Jun 2014 15:02:21 +0000 (11:02 -0400)]
closes #2871
Merge branch '2871-preload-objects'
Ward Vandewege [Tue, 10 Jun 2014 20:31:59 +0000 (16:31 -0400)]
Bugfix: the discovery doc should not clobber defaults values with the
word 'string'. Instead, make sure the default values are always exposed
as a string, which is something the java google apiclient is sensitive
to.
Refs no issue #
Peter Amstutz [Tue, 10 Jun 2014 20:04:56 +0000 (16:04 -0400)]
Added error-handler for x-editable that extracts Arvados API error field for
display, closes #2819
radhika [Tue, 10 Jun 2014 20:02:02 +0000 (16:02 -0400)]
2871: add andand to prevent error
radhika [Tue, 10 Jun 2014 19:56:07 +0000 (15:56 -0400)]
Merge branch 'master' into 2871-preload-objects
Peter Amstutz [Tue, 10 Jun 2014 19:46:42 +0000 (15:46 -0400)]
Merge branch '2961-load-tab-partials' closes #2961
Ward Vandewege [Tue, 10 Jun 2014 18:59:21 +0000 (14:59 -0400)]
arv-run-pipeline-instance should not keep trying to create jobs when the
API server returns an error on job creation.
This closes #3005
Peter Amstutz [Tue, 10 Jun 2014 18:56:01 +0000 (14:56 -0400)]
Merge branch '2826-simple-go-sdk' closes #2826
Ward Vandewege [Tue, 10 Jun 2014 18:32:09 +0000 (14:32 -0400)]
Fix inconsistent JSON error return behavior on job create.
refs #3004
Brett Smith [Tue, 10 Jun 2014 18:12:31 +0000 (14:12 -0400)]
Merge branch '2880-crunch-dispatch-node-constraints'
Closes #2880, #2976, #2993.
Brett Smith [Fri, 6 Jun 2014 17:18:38 +0000 (13:18 -0400)]
2880: Don't dispatch Jobs until runtime constraints are met.
This retains the same FIFO approach to the Job queue that
crunch-dispatch currently uses, but now when it encounters a Job whose
constraints are not met:
* it may wait for a while to see if the Node Manager makes Nodes
available, if it hasn't done that this hour; and
* it leaves that Job in the queue and tries to process the next one.
See #2880 for further background. The exact parameters of "waiting
for Nodes" will probably need tuning, but that will be easier to do
after it's been in production for a while.
Brett Smith [Fri, 6 Jun 2014 16:03:54 +0000 (12:03 -0400)]
2880: Improve error reporting when crunch-dispatch updates node status.
Brett Smith [Fri, 6 Jun 2014 16:03:08 +0000 (12:03 -0400)]
2880: crunch-dispatch must stop putting symbols in the database.
Peter Amstutz [Tue, 10 Jun 2014 17:31:46 +0000 (13:31 -0400)]
2961: Removed calls to wait_for_ajax, fixes user tests.
Peter Amstutz [Tue, 10 Jun 2014 17:28:13 +0000 (13:28 -0400)]
2961: user-setup-modal-window div is no longer in footer_html because it is
loaded using AJAX.
Peter Amstutz [Tue, 10 Jun 2014 17:26:20 +0000 (13:26 -0400)]
2961: Don't call #render_index from #index on folders_controller because #index
is also used by #choose and the index does not have any tabs.
Peter Amstutz [Tue, 10 Jun 2014 17:23:24 +0000 (13:23 -0400)]
2961: Do not include meta tag for websockets if there is no websockets in the
discovery document.
Peter Amstutz [Tue, 10 Jun 2014 17:22:48 +0000 (13:22 -0400)]
2961: Fixed name of collection on collection show page to fix test.
Peter Amstutz [Tue, 10 Jun 2014 14:20:29 +0000 (10:20 -0400)]
2961: Track valid/up to date state for each panel, only reload panels when they
are out of date (based on event log) and visible to user.
Peter Amstutz [Tue, 10 Jun 2014 14:18:22 +0000 (10:18 -0400)]
2961: Added use count so ajax loading icon is accurate when there are multiple
outstanding ajax requests.
Peter Amstutz [Tue, 10 Jun 2014 14:16:04 +0000 (10:16 -0400)]
2961: Removed dangling close div.
Peter Amstutz [Tue, 10 Jun 2014 14:15:34 +0000 (10:15 -0400)]
2961: Added missing user uuid to session.
Peter Amstutz [Tue, 10 Jun 2014 13:21:02 +0000 (09:21 -0400)]
Merge branch 'master' into 2961-load-tab-partials
Peter Amstutz [Tue, 10 Jun 2014 13:19:39 +0000 (09:19 -0400)]
Fix for running workbench against server that doesn't have 'Job.supplied_script_version' yet. refs #2939
Peter Amstutz [Tue, 10 Jun 2014 13:18:02 +0000 (09:18 -0400)]
2961: Job index needs to call super sometimes, render_index other times.
Peter Amstutz [Tue, 10 Jun 2014 13:08:38 +0000 (09:08 -0400)]
2961: Changed index methods on some controllers to use render_index instead of
super, to skip the default index query logic but still apply the tab partial
logic.
radhika [Tue, 10 Jun 2014 12:58:22 +0000 (08:58 -0400)]
Merge branch 'master' into 2871-preload-objects
radhika [Tue, 10 Jun 2014 12:49:39 +0000 (08:49 -0400)]
2871: trailing whitespace
Peter Amstutz [Mon, 9 Jun 2014 21:05:43 +0000 (17:05 -0400)]
Specify server-side keep-alive ping interval for websockets. no issue #
Peter Amstutz [Mon, 9 Jun 2014 20:57:50 +0000 (16:57 -0400)]
2961: Escaped erb used embedded in javascript. Updated comments in
event_log.js. Removed debug put from ApplicationController.
radhika [Mon, 9 Jun 2014 20:40:39 +0000 (16:40 -0400)]
Merge branch 'master' into 2871-preload-objects
radhika [Mon, 9 Jun 2014 20:39:31 +0000 (16:39 -0400)]
2871: test preload_objects_for_dataclass helper method
Ward Vandewege [Mon, 9 Jun 2014 20:33:01 +0000 (16:33 -0400)]
Add puma to the Gemfile for the API server; we use it for the websockets
server.
no issue #
radhika [Mon, 9 Jun 2014 19:37:39 +0000 (15:37 -0400)]
2871: preload_log_collections tests
radhika [Mon, 9 Jun 2014 18:00:53 +0000 (14:00 -0400)]
2871: more testing
radhika [Mon, 9 Jun 2014 17:24:09 +0000 (13:24 -0400)]
2871: more tests
radhika [Mon, 9 Jun 2014 16:09:56 +0000 (12:09 -0400)]
2871: test invoking methods a second time to retrieve preloaded data
radhika [Mon, 9 Jun 2014 15:43:40 +0000 (11:43 -0400)]
2871: add tests for get_n_objects_of_class helper method
Peter Amstutz [Mon, 9 Jun 2014 15:41:19 +0000 (11:41 -0400)]
2961: Collections show controller now delegates to super to handle tabs
properly.
radhika [Mon, 9 Jun 2014 14:13:16 +0000 (10:13 -0400)]
2871: add tests for preload_collections_for_objects helper method
radhika [Mon, 9 Jun 2014 13:42:04 +0000 (09:42 -0400)]
2871: add input checks for helper methods. start adding functional tests for the helper methods.
Peter Amstutz [Mon, 9 Jun 2014 13:09:20 +0000 (09:09 -0400)]
Merge remote-tracking branch 'origin/master' into 2961-load-tab-partials
Peter Amstutz [Mon, 9 Jun 2014 13:09:09 +0000 (09:09 -0400)]
2961: Save user information as part of the session cookie, eliminates looking
up current user when rendering every page and panel, this means 2x reduction in
latency when the panel only requires 1 API lookup otherwise.
Tom Clegg [Mon, 9 Jun 2014 01:38:54 +0000 (21:38 -0400)]
2872: Fix test for new nav.
Tom Clegg [Sat, 7 Jun 2014 19:28:15 +0000 (15:28 -0400)]
2872: Top nav gradient.
Tom Clegg [Sat, 7 Jun 2014 17:45:11 +0000 (13:45 -0400)]
2872: Hide projects nav bar when not logged in or inactive.
Tom Clegg [Sat, 7 Jun 2014 17:43:31 +0000 (13:43 -0400)]
2872: Fix notifications menu colors.
Tom Clegg [Sat, 7 Jun 2014 17:40:40 +0000 (13:40 -0400)]
2872: Rearrange top nav with breadcrumbs/projects bar.
Tom Clegg [Sat, 7 Jun 2014 15:36:58 +0000 (11:36 -0400)]
2872: Rename folders to projects
Tom Clegg [Sat, 7 Jun 2014 15:33:50 +0000 (11:33 -0400)]
2872: Hide unnecessary scroll bar
radhika [Sat, 7 Jun 2014 13:03:19 +0000 (09:03 -0400)]
Merge branch 'master' into 2871-preload-objects
radhika [Sat, 7 Jun 2014 12:52:45 +0000 (08:52 -0400)]
2872: updates to the new test that creates and runs pipeline instance from within a folder.
radhika [Sat, 7 Jun 2014 12:41:55 +0000 (08:41 -0400)]
2872: added a test that creates a pipeline instance from within a folder and runs it.
Tom Clegg [Sat, 7 Jun 2014 03:41:39 +0000 (23:41 -0400)]
2872: Fix provenance graph absolute position.
radhika [Fri, 6 Jun 2014 23:15:30 +0000 (19:15 -0400)]
2872: add test for a pipeline instance with job associated so that the provenance graph can be tested.
radhika [Fri, 6 Jun 2014 22:25:25 +0000 (18:25 -0400)]
2872: test now passing since the UI issue with "Resume" button is addressed.
Tim Pierce [Fri, 6 Jun 2014 21:37:18 +0000 (17:37 -0400)]
Merge branch '2857-collection-tests'
Closes #2857.
radhika [Fri, 6 Jun 2014 21:12:45 +0000 (17:12 -0400)]
Merge branch '2872-folder-nav' into 2872-folder-nav-tests
Tom Clegg [Fri, 6 Jun 2014 21:09:34 +0000 (17:09 -0400)]
2872: Fix string+nil bug.
Tom Clegg [Fri, 6 Jun 2014 21:07:56 +0000 (17:07 -0400)]
2872: Fix up pipeline instance table, show "resume" button if paused.
radhika [Fri, 6 Jun 2014 19:57:19 +0000 (15:57 -0400)]
Merge branch 'master' into 2871-preload-objects
radhika [Fri, 6 Jun 2014 19:53:12 +0000 (15:53 -0400)]
2872: added graph and run button checks back. the test does not pass right now due to bug in graph tab display in pipeline instance display.
Tim Pierce [Fri, 6 Jun 2014 19:48:43 +0000 (15:48 -0400)]
2857: strip signatures from manifests before testing equality.
As Brett observed, the "post" method in these tests mutates its
argument. For a valid test, we must ensure that the source data has not
been transformed into the result data.
For tests which do not care about validating the signatures, we just
strip out the signatures from the result manifest before comparing it to
the source.
Refs #2857.
radhika [Fri, 6 Jun 2014 18:52:00 +0000 (14:52 -0400)]
Merge branch '2872-folder-nav' into 2872-folder-nav-tests
Tom Clegg [Fri, 6 Jun 2014 18:50:41 +0000 (14:50 -0400)]
2872: Bring back Graph pane on pipeline instance show page.
radhika [Fri, 6 Jun 2014 18:41:42 +0000 (14:41 -0400)]
2872: when a pipeline instance still needs input, the Run button should be disabled.
radhika [Fri, 6 Jun 2014 18:32:02 +0000 (14:32 -0400)]
Merge branch '2872-folder-nav' into 2872-folder-nav-tests
radhika [Fri, 6 Jun 2014 18:30:36 +0000 (14:30 -0400)]
2872: updated test to work with the new ui.
Peter Amstutz [Fri, 6 Jun 2014 17:45:18 +0000 (13:45 -0400)]
2961: Added checks if we are rendering a tab partial and skips expensive calls
to the API server if not needed to render the requested tab pane.
Tom Clegg [Fri, 6 Jun 2014 16:56:03 +0000 (12:56 -0400)]
2872: Fix auto-disable/enable "Run" button on pipeline page.
Tom Clegg [Fri, 6 Jun 2014 16:56:00 +0000 (12:56 -0400)]
2872: On front page, only show recent pipelines and jobs that are in folders.
Tim Pierce [Fri, 6 Jun 2014 15:31:59 +0000 (11:31 -0400)]
Merge branch 'master' into 2857-collection-tests
Peter Amstutz [Fri, 6 Jun 2014 14:40:59 +0000 (10:40 -0400)]
Merge branch '2955-fail-orphan-jobs' closes #2955
Peter Amstutz [Fri, 6 Jun 2014 14:39:39 +0000 (10:39 -0400)]
Reverted change
a0aba6d "crunch-dispatch now sends a clean environment to crunch-job"
Peter Amstutz [Fri, 6 Jun 2014 14:31:18 +0000 (10:31 -0400)]
Merge branch 'master' into 2955-fail-orphan-jobs
Peter Amstutz [Fri, 6 Jun 2014 14:30:06 +0000 (10:30 -0400)]
Reverted change
a0aba6d "crunch-dispatch now sends a clean environment to crunch-job" refs #2882.
Brett Smith [Fri, 6 Jun 2014 13:47:11 +0000 (09:47 -0400)]
Merge branch '2880-compute-ping-stats'
Closes #2967, #2975.
Brett Smith [Thu, 5 Jun 2014 15:38:46 +0000 (11:38 -0400)]
2880: API server saves node statistics from pings.
Crunch will use this information when scheduling Jobs, to satisfy
specified runtime constraints. Getting this data into the pings is
the responsibility of the node's ping script.
Brett Smith [Fri, 6 Jun 2014 13:38:25 +0000 (09:38 -0400)]
2882: Workbench generic create controller adds JSON href attribute.
This is a bugfix commit. This detail got lost when create stopped
calling show to render the object. Refs #2882.
radhika [Fri, 6 Jun 2014 12:41:30 +0000 (08:41 -0400)]
2872: update test to meet the current ui updates. the pipeline instances test still failing; possible error in ui where the Run button is enabled even when input is not provided.
radhika [Fri, 6 Jun 2014 11:27:16 +0000 (07:27 -0400)]
Merge branch '2872-folder-nav' into 2872-folder-nav-tests
Tom Clegg [Fri, 6 Jun 2014 07:32:46 +0000 (03:32 -0400)]
2872: Use collection name, not hash, for breadcrumbs/title/activity.
Tom Clegg [Fri, 6 Jun 2014 07:17:32 +0000 (03:17 -0400)]
2872: Enable OK/Cancel buttons on editable popup. Lose "close" button.
Tom Clegg [Fri, 6 Jun 2014 07:10:36 +0000 (03:10 -0400)]
2872: Tweak wording on pipeline inputs page.
Tom Clegg [Fri, 6 Jun 2014 07:07:18 +0000 (03:07 -0400)]
2872: Fix up login behavior.
Tom Clegg [Fri, 6 Jun 2014 06:49:56 +0000 (02:49 -0400)]
2872: Make "inactive" and "not logged in" behavior work on all pages, not just dashboard.
Tom Clegg [Fri, 6 Jun 2014 05:50:55 +0000 (01:50 -0400)]
2872: Ensure user agreement can be viewed before being accepted.
radhika [Fri, 6 Jun 2014 03:55:17 +0000 (23:55 -0400)]
2872: all tests are updated to reflect the new ui.
Peter Amstutz [Fri, 6 Jun 2014 02:02:30 +0000 (22:02 -0400)]
2961: Now loads tab panes (past the first one) in the background.
Automatically triggers reload of tab panes when receiving a changed event from
websocket.
Peter Amstutz [Thu, 5 Jun 2014 20:31:18 +0000 (16:31 -0400)]
2961: Removed spurious elementId from subscribeToEventLog(). Added arv-log-event-listener[data-object-type="xxxxx"] to
match on uuid types.