arvados.git
7 months ago18874: Merge commit '6f8dcb2b13f3058db656908fb26b09e23b527f08' into 18874-merge-wb2
Tom Clegg [Thu, 28 Sep 2023 15:24:01 +0000 (11:24 -0400)]
18874: Merge commit '6f8dcb2b13f3058db656908fb26b09e23b527f08' into 18874-merge-wb2

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

7 months agoMerge branch '19359-optional-enum' refs #19359
Peter Amstutz [Fri, 15 Sep 2023 14:03:21 +0000 (10:03 -0400)]
Merge branch '19359-optional-enum' refs #19359

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

7 months ago19359: Can select empty item to clear optional enum input
Peter Amstutz [Thu, 14 Sep 2023 21:06:11 +0000 (17:06 -0400)]
19359: Can select empty item to clear optional enum input

Sets the field value to null, which means "use default value" in CWL.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

7 months ago19359: Support 'optional' enum type parameters
Peter Amstutz [Fri, 8 Sep 2023 20:06:37 +0000 (16:06 -0400)]
19359: Support 'optional' enum type parameters

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20913-user-profile' refs #20913
Peter Amstutz [Tue, 5 Sep 2023 18:36:50 +0000 (14:36 -0400)]
Merge branch '20913-user-profile' refs #20913

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20899-wf-delete' refs #20899
Peter Amstutz [Fri, 1 Sep 2023 16:13:08 +0000 (12:13 -0400)]
Merge branch '20899-wf-delete' refs #20899

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20913: Fix test to check that use profile gets saved
Peter Amstutz [Wed, 30 Aug 2023 20:23:33 +0000 (16:23 -0400)]
20913: Fix test to check that use profile gets saved

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20899: Add menu item to delete workflow record
Peter Amstutz [Mon, 28 Aug 2023 19:19:39 +0000 (15:19 -0400)]
20899: Add menu item to delete workflow record

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Fix run-tests.sh test targets.
Tom Clegg [Mon, 28 Aug 2023 18:09:56 +0000 (14:09 -0400)]
18874: Fix run-tests.sh test targets.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Merge branch 'main' into 18874-merge-wb2
Tom Clegg [Mon, 28 Aug 2023 14:31:49 +0000 (10:31 -0400)]
18874: Merge branch 'main' into 18874-merge-wb2

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoMerge branch '20877-trashed-priority' refs #20877
Peter Amstutz [Fri, 25 Aug 2023 14:49:33 +0000 (10:49 -0400)]
Merge branch '20877-trashed-priority' refs #20877

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20894-instances-default' refs #20894
Peter Amstutz [Fri, 25 Aug 2023 14:04:25 +0000 (10:04 -0400)]
Merge branch '20894-instances-default' refs #20894

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20884-rocky8-copy' refs #20884
Peter Amstutz [Thu, 24 Aug 2023 20:35:53 +0000 (16:35 -0400)]
Merge branch '20884-rocky8-copy' refs #20884

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20884: Update Makefile copy rule to accommodate rocky8
Brett Smith [Thu, 24 Aug 2023 19:41:16 +0000 (15:41 -0400)]
20884: Update Makefile copy rule to accommodate rocky8

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months agoMerge branch '20829-can-manage' refs #20829
Peter Amstutz [Thu, 24 Aug 2023 19:06:05 +0000 (15:06 -0400)]
Merge branch '20829-can-manage' refs #20829

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: `arvados-server boot` uses workbench2 in main repo.
Tom Clegg [Thu, 24 Aug 2023 18:22:12 +0000 (14:22 -0400)]
18874: `arvados-server boot` uses workbench2 in main repo.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: `arvados-server install` uses workbench2 in main repo.
Tom Clegg [Thu, 24 Aug 2023 18:17:45 +0000 (14:17 -0400)]
18874: `arvados-server install` uses workbench2 in main repo.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoMerge branch '20890-remove-wb1-switch' refs #20890
Peter Amstutz [Thu, 24 Aug 2023 17:39:32 +0000 (13:39 -0400)]
Merge branch '20890-remove-wb1-switch'  refs #20890

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Fix arvados-boot source dir.
Tom Clegg [Thu, 24 Aug 2023 17:30:08 +0000 (13:30 -0400)]
18874: Fix arvados-boot source dir.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoMerge branch '20603-trash-show-all' refs #20603
Peter Amstutz [Thu, 24 Aug 2023 17:14:50 +0000 (13:14 -0400)]
Merge branch '20603-trash-show-all' refs #20603

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Skip `arvados-server install`.
Tom Clegg [Thu, 24 Aug 2023 17:00:17 +0000 (13:00 -0400)]
18874: Skip `arvados-server install`.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Fix gopath in test script.
Tom Clegg [Thu, 24 Aug 2023 16:19:18 +0000 (12:19 -0400)]
18874: Fix gopath in test script.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Don't run workbench2 integration tests in docker.
Tom Clegg [Thu, 24 Aug 2023 15:28:27 +0000 (11:28 -0400)]
18874: Don't run workbench2 integration tests in docker.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Make `run-tests.sh --only services/workbench2` work.
Tom Clegg [Thu, 24 Aug 2023 14:54:18 +0000 (10:54 -0400)]
18874: Make `run-tests.sh --only services/workbench2` work.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoRevert "20894: Change default retention on prometheus to 90 days" 20894-instances-default
Peter Amstutz [Thu, 24 Aug 2023 14:10:35 +0000 (10:10 -0400)]
Revert "20894: Change default retention on prometheus to 90 days"

This reverts commit 15e554b5da9d4da9447e547abd536c53be069a21.

According to Lucas, this doesn't actually work.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20884: Add rocky8 to list of build targets
Peter Amstutz [Thu, 24 Aug 2023 13:57:50 +0000 (09:57 -0400)]
20884: Add rocky8 to list of build targets

refs #20884

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20894: Change default retention on prometheus to 90 days
Peter Amstutz [Thu, 24 Aug 2023 14:06:41 +0000 (10:06 -0400)]
20894: Change default retention on prometheus to 90 days

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20890: Remove "Switch to workbench 1" menu item
Peter Amstutz [Thu, 24 Aug 2023 13:54:41 +0000 (09:54 -0400)]
20890: Remove "Switch to workbench 1" menu item

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Don't try to run arvados-server install from run-tests.sh.
Tom Clegg [Wed, 23 Aug 2023 20:29:53 +0000 (16:29 -0400)]
18874: Don't try to run arvados-server install from run-tests.sh.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoMerge branch '20617-shared-with-me-filtering' into main. Closes #20617
Stephen Smith [Wed, 23 Aug 2023 19:31:26 +0000 (15:31 -0400)]
Merge branch '20617-shared-with-me-filtering' into main. Closes #20617

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20894: Set LimitLogBytesPerJob to 0
Peter Amstutz [Wed, 23 Aug 2023 18:58:43 +0000 (14:58 -0400)]
20894: Set LimitLogBytesPerJob to 0

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Use provided GOPATH, if any, in workbench2 Makefile recipe.
Tom Clegg [Wed, 23 Aug 2023 18:39:27 +0000 (14:39 -0400)]
18874: Use provided GOPATH, if any, in workbench2 Makefile recipe.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20894: Wordsmithing
Peter Amstutz [Wed, 23 Aug 2023 17:24:10 +0000 (13:24 -0400)]
20894: Wordsmithing

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20894: Change InitialQuotaEstimate and SupervisorFraction defaults.
Peter Amstutz [Wed, 23 Aug 2023 17:08:45 +0000 (13:08 -0400)]
20894: Change InitialQuotaEstimate and SupervisorFraction defaults.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago18874: Move .licenseignore rules to top.
Tom Clegg [Tue, 22 Aug 2023 13:32:56 +0000 (09:32 -0400)]
18874: Move .licenseignore rules to top.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Add workbench2 to run-tests.sh.
Tom Clegg [Mon, 21 Aug 2023 18:57:00 +0000 (14:57 -0400)]
18874: Add workbench2 to run-tests.sh.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago18874: Add 'services/workbench2/' from commit 'f6f88d9ca9cdeeeebfadcfe999789bfb9f69e5c6'
Tom Clegg [Wed, 23 Aug 2023 14:23:17 +0000 (10:23 -0400)]
18874: Add 'services/workbench2/' from commit 'f6f88d9ca9cdeeeebfadcfe999789bfb9f69e5c6'

git-subtree-dir: services/workbench2
git-subtree-mainline: 6de571a660401585bc96dd92fd2563e9b64c58c6
git-subtree-split: f6f88d9ca9cdeeeebfadcfe999789bfb9f69e5c6

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20877: Fix missing 'and'
Peter Amstutz [Wed, 23 Aug 2023 13:31:47 +0000 (09:31 -0400)]
20877: Fix missing 'and'

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20829: Check parent for editable status
Peter Amstutz [Tue, 22 Aug 2023 19:40:16 +0000 (15:40 -0400)]
20829: Check parent for editable status

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20829: Migrate to canWrite and canManage for permission checks
Peter Amstutz [Tue, 22 Aug 2023 18:16:29 +0000 (14:16 -0400)]
20829: Migrate to canWrite and canManage for permission checks

Replace use of writableBy with canWrite and canManage, and remove
writableBy from workbench 2 entirely.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20829: Add canWrite and canManage to group and API response dialog
Peter Amstutz [Tue, 22 Aug 2023 17:19:22 +0000 (13:19 -0400)]
20829: Add canWrite and canManage to group and API response dialog

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20617: Extend sharing cypress test to check search/filters
Stephen Smith [Tue, 22 Aug 2023 17:04:25 +0000 (13:04 -0400)]
20617: Extend sharing cypress test to check search/filters

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20617: Move shared-with-me filter additions to getParams
Stephen Smith [Tue, 22 Aug 2023 15:18:50 +0000 (11:18 -0400)]
20617: Move shared-with-me filter additions to getParams

Prevents accidentally overriding filters and fixes filters being ignored

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20603: Trash shows all items, not just those owned by user
Peter Amstutz [Tue, 22 Aug 2023 15:17:45 +0000 (11:17 -0400)]
20603: Trash shows all items, not just those owned by user

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20877: Don't retry trashed container requests
Peter Amstutz [Mon, 21 Aug 2023 20:56:22 +0000 (16:56 -0400)]
20877: Don't retry trashed container requests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20877: When trashing a project, update priorities on container requests
Peter Amstutz [Mon, 21 Aug 2023 20:42:39 +0000 (16:42 -0400)]
20877: When trashing a project, update priorities on container requests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20882-fix-priority' refs #20882
Peter Amstutz [Mon, 21 Aug 2023 20:18:44 +0000 (16:18 -0400)]
Merge branch '20882-fix-priority' refs #20882

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20845-queued-process-filter' refs #20845
Peter Amstutz [Mon, 21 Aug 2023 20:18:10 +0000 (16:18 -0400)]
Merge branch '20845-queued-process-filter' refs #20845

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20513-link-cwl-code' refs #20513
Peter Amstutz [Mon, 21 Aug 2023 20:17:33 +0000 (16:17 -0400)]
Merge branch '20513-link-cwl-code' refs #20513

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '19793-collection-back' refs #19793
Peter Amstutz [Mon, 21 Aug 2023 20:14:16 +0000 (16:14 -0400)]
Merge branch '19793-collection-back' refs #19793

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20454-cost-display' refs #20454
Peter Amstutz [Mon, 21 Aug 2023 20:13:07 +0000 (16:13 -0400)]
Merge branch '20454-cost-display' refs #20454

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '18946-user-profile' refs #18946
Peter Amstutz [Mon, 21 Aug 2023 19:50:45 +0000 (15:50 -0400)]
Merge branch '18946-user-profile' refs #18946

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20219-log-api' into main. Closes #20219
Stephen Smith [Mon, 21 Aug 2023 18:30:26 +0000 (14:30 -0400)]
Merge branch '20219-log-api' into main. Closes #20219

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20877: Add test for trashing project
Peter Amstutz [Mon, 21 Aug 2023 18:02:23 +0000 (14:02 -0400)]
20877: Add test for trashing project

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch 'main' of git.arvados.org:arvados-workbench2 into 20219-log-api
Stephen Smith [Mon, 21 Aug 2023 17:35:34 +0000 (13:35 -0400)]
Merge branch 'main' of git.arvados.org:arvados-workbench2 into 20219-log-api

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoMerge branch '19991-breadcrumbs-missing-bug' into main. Closes #19991
Stephen Smith [Mon, 21 Aug 2023 17:34:00 +0000 (13:34 -0400)]
Merge branch '19991-breadcrumbs-missing-bug' into main. Closes #19991

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20219: Suppress error toast when process logs fail to load due to 404
Stephen Smith [Mon, 21 Aug 2023 16:35:59 +0000 (12:35 -0400)]
20219: Suppress error toast when process logs fail to load due to 404

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20219: Add unit tests for log service webdav methods
Stephen Smith [Mon, 21 Aug 2023 16:31:27 +0000 (12:31 -0400)]
20219: Add unit tests for log service webdav methods

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20219: Make log service easier to test using interfaces
Stephen Smith [Mon, 21 Aug 2023 16:30:57 +0000 (12:30 -0400)]
20219: Make log service easier to test using interfaces

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20219: Make cypress collection replace files method more specific
Stephen Smith [Mon, 21 Aug 2023 16:30:23 +0000 (12:30 -0400)]
20219: Make cypress collection replace files method more specific

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20219: Rename doKeepRequest to doWebDAVRequest for clarity
Stephen Smith [Mon, 21 Aug 2023 16:22:41 +0000 (12:22 -0400)]
20219: Rename doKeepRequest to doWebDAVRequest for clarity

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoMerge branch '20853-pdoc'
Brett Smith [Mon, 21 Aug 2023 16:15:50 +0000 (12:15 -0400)]
Merge branch '20853-pdoc'

Closes #20853.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago19991: Switch localhost for 127.0.0.1 due to wb url change
Stephen Smith [Fri, 18 Aug 2023 22:27:33 +0000 (18:27 -0400)]
19991: Switch localhost for 127.0.0.1 due to wb url change

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago19991: Change cypress url from localhost to 127.0.0.1 to match arvados
Stephen Smith [Fri, 18 Aug 2023 21:38:54 +0000 (17:38 -0400)]
19991: Change cypress url from localhost to 127.0.0.1 to match arvados
Solves cords cookie issues when testing inline io panel image previews

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoAdd pdoc to arvbox, refs #20853
Peter Amstutz [Fri, 18 Aug 2023 20:41:19 +0000 (16:41 -0400)]
Add pdoc to arvbox, refs #20853

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago19991: Switch search spec federated test cy.intercept to use 127.0.0.1 instead of...
Stephen Smith [Fri, 18 Aug 2023 20:27:17 +0000 (16:27 -0400)]
19991: Switch search spec federated test cy.intercept to use 127.0.0.1 instead of localhost.

Also change collection names to make collisions impossible

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago18946: Don't navigate away from my-account page on password login
Peter Amstutz [Fri, 18 Aug 2023 18:22:56 +0000 (14:22 -0400)]
18946: Don't navigate away from my-account page on password login

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago19991: Add small delay to allow open in new tab / copy to clipboard to execute
Stephen Smith [Fri, 18 Aug 2023 16:57:48 +0000 (12:57 -0400)]
19991: Add small delay to allow open in new tab / copy to clipboard to execute

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago19991: Fix for search cypress test
Stephen Smith [Fri, 18 Aug 2023 16:29:05 +0000 (12:29 -0400)]
19991: Fix for search cypress test

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago19991: Fix some cypress tests
Stephen Smith [Fri, 18 Aug 2023 15:13:19 +0000 (11:13 -0400)]
19991: Fix some cypress tests

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago20882: Submit with priority 500, not priority 1
Peter Amstutz [Fri, 18 Aug 2023 15:01:37 +0000 (11:01 -0400)]
20882: Submit with priority 500, not priority 1

(Priority ought to be editable but that's a different story)

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20878-rh-package-download'
Brett Smith [Fri, 18 Aug 2023 13:28:43 +0000 (09:28 -0400)]
Merge branch '20878-rh-package-download'

Closes #20878.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago20878: Document package download change to add a target distribution 20878-rh-package-download
Brett Smith [Thu, 17 Aug 2023 23:53:33 +0000 (19:53 -0400)]
20878: Document package download change to add a target distribution

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago20878: Improve processed RPM check style
Brett Smith [Thu, 17 Aug 2023 22:28:17 +0000 (18:28 -0400)]
20878: Improve processed RPM check style

This is nicer bash style that makes it more consistent with the
preceding download code.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago20878: Improve RPM download logic
Brett Smith [Thu, 17 Aug 2023 22:27:12 +0000 (18:27 -0400)]
20878: Improve RPM download logic

Instead of downloading and parsing a package file listing, just try to
download the package directly, and check whether that succeeds.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago20878: Parameterize URL for RPM package builds
Brett Smith [Thu, 17 Aug 2023 22:20:37 +0000 (18:20 -0400)]
20878: Parameterize URL for RPM package builds

* Add support for rocky8.
* Prevent future errors by refusing to attempt a download for unknown
  targets.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago19991: Try to fix tests / elements detached from dom
Stephen Smith [Thu, 17 Aug 2023 18:36:54 +0000 (14:36 -0400)]
19991: Try to fix tests / elements detached from dom

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months ago19991: Remove usage of side panel tree to generate breadcrumbs, uses ancestor
Stephen Smith [Thu, 17 Aug 2023 17:22:23 +0000 (13:22 -0400)]
19991: Remove usage of side panel tree to generate breadcrumbs, uses ancestor
service instead.

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoMerge branch '20858-jsonb-exists' refs #20858
Peter Amstutz [Wed, 16 Aug 2023 18:54:58 +0000 (14:54 -0400)]
Merge branch '20858-jsonb-exists' refs #20858

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months agoMerge branch '20735-install-test'
Tom Clegg [Wed, 16 Aug 2023 13:32:32 +0000 (09:32 -0400)]
Merge branch '20735-install-test'

refs #20735

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Workaround nginx/glibc/docker issue.
Tom Clegg [Wed, 16 Aug 2023 13:04:18 +0000 (09:04 -0400)]
20735: Workaround nginx/glibc/docker issue.

Docker writes both "::1 localhost" and "127.0.0.1 localhost" in
/etc/hosts even when not enabling IPv6 [1], causing glibc to resolve
"localhost" to two identical IP addresses 127.0.0.1 and 127.0.0.1 [2],
causing nginx to error out on "listen localhost:45123;" [3]:

[emerg] a duplicate listen 127.0.0.1:45123 in /tmp/nginx.conf:29

[1] https://github.com/moby/moby/issues/35954#issuecomment-498406618
("you should be testing with IPv6 enabled")

[1] https://sourceware.org/bugzilla/show_bug.cgi?id=14969 (open since
2012-12-17)

[2] https://trac.nginx.org/nginx/ticket/2400 (workaround added
2022-11-23)

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20219: Try to fix tests on jenkins
Stephen Smith [Tue, 15 Aug 2023 23:29:56 +0000 (19:29 -0400)]
20219: Try to fix tests on jenkins

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoMerge branch '20680-cores-concurrency' refs #20680
Peter Amstutz [Tue, 15 Aug 2023 20:52:41 +0000 (16:52 -0400)]
Merge branch '20680-cores-concurrency' refs #20680

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20858: Enable 'exists' filter to use index 20858-jsonb-exists
Peter Amstutz [Tue, 15 Aug 2023 20:41:01 +0000 (16:41 -0400)]
20858: Enable 'exists' filter to use index

See comment in services/api/db/migrate/20230815160000_jsonb_exists_functions.rb

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago20735: Fix default workbench2-source path.
Tom Clegg [Fri, 11 Aug 2023 13:47:10 +0000 (09:47 -0400)]
20735: Fix default workbench2-source path.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Override git directory ownership check.
Tom Clegg [Thu, 10 Aug 2023 21:18:27 +0000 (17:18 -0400)]
20735: Override git directory ownership check.

Without this, `git diff --shortstat` returns an error "warning: Not a
git repository."

The real problem, as reported by `git status`, is "fatal: detected
dubious ownership in repository at '/path'".

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Fix auto version generator.
Tom Clegg [Thu, 10 Aug 2023 20:41:49 +0000 (16:41 -0400)]
20735: Fix auto version generator.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Revive lib/install dependency test.
Tom Clegg [Thu, 10 Aug 2023 19:22:55 +0000 (15:22 -0400)]
20735: Revive lib/install dependency test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Fix firefox package name on debian 11.
Tom Clegg [Thu, 10 Aug 2023 19:21:52 +0000 (15:21 -0400)]
20735: Fix firefox package name on debian 11.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20735: Fixup singularity dependencies (test/dev-only).
Tom Clegg [Thu, 10 Aug 2023 19:20:15 +0000 (15:20 -0400)]
20735: Fixup singularity dependencies (test/dev-only).

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago20219: Increase cypress timeouts when appending logs
Stephen Smith [Tue, 15 Aug 2023 17:43:46 +0000 (13:43 -0400)]
20219: Increase cypress timeouts when appending logs

Waiting on an intercept doesn't work because on fast systems the wait is too late

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoMerge branch '17244-cgroup2-cpu-max'
Tom Clegg [Tue, 15 Aug 2023 17:41:58 +0000 (13:41 -0400)]
Merge branch '17244-cgroup2-cpu-max'

fixes #17244

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months ago17244: Add upgrade note re number formatting change.
Tom Clegg [Tue, 15 Aug 2023 17:40:18 +0000 (13:40 -0400)]
17244: Add upgrade note re number formatting change.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

8 months agoFurther fixes on single host installer deployment. No issue #
Lucas Di Pentima [Tue, 15 Aug 2023 17:39:44 +0000 (14:39 -0300)]
Further fixes on single host installer deployment. No issue #

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago20219: Switch log panel requests to use live log endpoint, adjust tests to match
Stephen Smith [Tue, 15 Aug 2023 16:47:09 +0000 (12:47 -0400)]
20219: Switch log panel requests to use live log endpoint, adjust tests to match

Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>

8 months agoFixes deployment when using envvar BRANCH=main. No issue #
Lucas Di Pentima [Tue, 15 Aug 2023 13:53:05 +0000 (10:53 -0300)]
Fixes deployment when using envvar BRANCH=main. No issue #

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

8 months ago20853: Modernize pdoc installation process 20853-pdoc
Brett Smith [Mon, 14 Aug 2023 21:04:10 +0000 (17:04 -0400)]
20853: Modernize pdoc installation process

Install to a virtualenv to accommodate PEP 668.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago20853: Switch from pdoc3 to pdoc
Brett Smith [Mon, 14 Aug 2023 21:00:57 +0000 (17:00 -0400)]
20853: Switch from pdoc3 to pdoc

pdoc is better maintained, both in terms of release cadence and in terms
of community code of conduct.

Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>

8 months ago19793: Make browser back button work on nav to PDH
Peter Amstutz [Mon, 14 Aug 2023 20:40:32 +0000 (16:40 -0400)]
19793: Make browser back button work on nav to PDH

When navigating to a collection by PDH, if there is only one match, it
the portable data hash page automatically directs the user to the
appropriate collection page.  However, if the user pushes the back
button, they go back to portable data hash page which automatically
takes them to the collection page again.  This effectively breaks the
back button.

This fixes the bug by replacing (instead of "pushing") the top of the
location history with the collection page, so that the back button
from the collection page takes the user to their previous page without
revisiting the portable data hash page (so they are not endlessly
redirected).

This commit message is longer than the actual code fix.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

8 months ago17244: New debian10 testdata, add cpu.max and cpuinfo for others. 17244-cgroup2-cpu-max
Tom Clegg [Mon, 14 Aug 2023 19:40:36 +0000 (15:40 -0400)]
17244: New debian10 testdata, add cpu.max and cpuinfo for others.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>