Lucas Di Pentima [Tue, 23 Oct 2018 13:56:18 +0000 (10:56 -0300)]
Merge branch '13561-collection-versions-doc'
Closes #13561
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 23 Oct 2018 13:55:12 +0000 (10:55 -0300)]
13561: Rephrased some sentences to avoid confusion.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 22 Oct 2018 16:29:27 +0000 (13:29 -0300)]
Merge branch '13561-trashed-collection-versions-fix'
Refs #13561
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 22 Oct 2018 15:21:55 +0000 (12:21 -0300)]
13561: Formatting fixes, examples enhancements & additions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 19 Oct 2018 14:11:33 +0000 (10:11 -0400)]
Merge branch '14260-expired-token-delete' refs #14260
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 19 Oct 2018 14:06:50 +0000 (10:06 -0400)]
14260: Use straight SQL DELETE instead of destroy_all
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Thu, 18 Oct 2018 23:20:19 +0000 (20:20 -0300)]
13561: Code cleanup.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 18 Oct 2018 22:46:18 +0000 (19:46 -0300)]
13561: Exclude past versions regardless of user & include_trash setting.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Thu, 18 Oct 2018 17:44:35 +0000 (13:44 -0400)]
Merge branch '14260-runtime-token' refs #14260
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Oct 2018 17:42:13 +0000 (13:42 -0400)]
Merge branch '14366-crunch2-upgrade' refs #14366
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Oct 2018 17:18:19 +0000 (13:18 -0400)]
14260: Remove redundant schema_migrations in structure.sql
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Oct 2018 16:20:50 +0000 (12:20 -0400)]
14260: Sort runtime_auth_scopes
Container.for_current_token returns nil or a Container (not an active
record query).
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 18 Oct 2018 15:58:57 +0000 (11:58 -0400)]
Merge branch 'master' into 14260-runtime-token
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 10 Oct 2018 20:12:27 +0000 (17:12 -0300)]
13561: Re-phrase user guide & add admin guide section.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Fri, 5 Oct 2018 18:55:41 +0000 (15:55 -0300)]
13561: Update documentation on collection versioning.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 17 Oct 2018 20:12:48 +0000 (17:12 -0300)]
Merge branch '13561-collection-versions-fixes'
Refs #13561
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Wed, 17 Oct 2018 19:54:00 +0000 (15:54 -0400)]
14366: Add "upgrade to containers api" to "upgrading" section
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 17 Oct 2018 19:43:15 +0000 (15:43 -0400)]
14366: Improve wording of "upgrading to containers API" section
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 17 Oct 2018 18:51:36 +0000 (15:51 -0300)]
13561: Raise exception instead of ignoring versioning attributes updates.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 17 Oct 2018 18:05:50 +0000 (15:05 -0300)]
13561: Fixes api to get a collection with its past versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Ward Vandewege [Wed, 17 Oct 2018 01:38:54 +0000 (21:38 -0400)]
For the package test docker images, sanitize how we get the rvm GPG key,
and remove a dependency on the GPG keyservers which are flakey.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 16 Oct 2018 20:49:15 +0000 (16:49 -0400)]
Add a systemd service file to arvados-node-manager.
Reset package iteration number for arvados-node-manager to version 1.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 16 Oct 2018 20:38:01 +0000 (16:38 -0400)]
Remove spurious output from run-build-packages.sh
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 16 Oct 2018 20:37:00 +0000 (16:37 -0400)]
14344: bump package version for arvados-docker-cleaner so that we get a new
package built with the systemd service file.
refs #14344
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 16 Oct 2018 19:48:44 +0000 (15:48 -0400)]
14344: Merge branch '14344-fix-rpm-vs-deb-detection'
closes #14344
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Tue, 16 Oct 2018 13:35:17 +0000 (09:35 -0400)]
14344: Move "set -e" back to top.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Tue, 16 Oct 2018 01:49:30 +0000 (21:49 -0400)]
Fix the detection of rpm vs deb systems.
refs #14344
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Tue, 16 Oct 2018 17:24:04 +0000 (13:24 -0400)]
Merge branch '14285-keep-balance-metrics'
closes #14285
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 21:36:03 +0000 (17:36 -0400)]
14285: Update admin/metrics docs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 21:02:22 +0000 (17:02 -0400)]
14285: Add deduplication ratio to keep-balance metrics.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 16 Oct 2018 15:41:54 +0000 (11:41 -0400)]
Fix missing namespace in metric names.
refs #14285
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Mon, 15 Oct 2018 23:06:17 +0000 (19:06 -0400)]
Revert change to setup.py for arvados-docker-cleaner, pip doesn't agree with
it...
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 21:11:11 +0000 (17:11 -0400)]
14260: secret_mounts works with runtime_token (really this time)
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Mon, 15 Oct 2018 21:06:04 +0000 (17:06 -0400)]
Merge branch '14338-workbench-flag-to-disable-repositories'
closes #14338
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Fri, 12 Oct 2018 15:15:44 +0000 (11:15 -0400)]
Add a flag to hide repositories entries in the Workbench menus. This is useful
in a scenario where the jobs api is disabled and there are no local git
repositories. Local git repositories are optional when using the containers api.
refs #14338
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 20:53:40 +0000 (16:53 -0400)]
14260: secret_mounts works with runtime_token
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 20:47:38 +0000 (16:47 -0400)]
14260: add runtime_user_uuid and runtime_auth_scopes to API response
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Mon, 15 Oct 2018 20:36:07 +0000 (16:36 -0400)]
Make sure that the arvados-docker-cleaner systemd service file is installed in
the correct directory.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 20:20:39 +0000 (16:20 -0400)]
14260: Bugfix for runtime_token/secret_mounts and retries
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 20:09:36 +0000 (16:09 -0400)]
Merge branch '14285-keep-balance-metrics'
refs #14285
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 20:08:22 +0000 (16:08 -0400)]
14285: Merge branch 'master' into 14285-keep-balance-metrics
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Mon, 15 Oct 2018 19:39:14 +0000 (15:39 -0400)]
Webshell requires the short hostname for the shell server object.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Fri, 12 Oct 2018 20:01:44 +0000 (16:01 -0400)]
The `arv group create` command doesn't set group_class by default, and we need
that field set to 'project' for the 'Arvados Standard Docker Images' project.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Fri, 12 Oct 2018 19:53:37 +0000 (15:53 -0400)]
Small documentation fixes.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Lucas Di Pentima [Mon, 15 Oct 2018 18:10:20 +0000 (15:10 -0300)]
Merge branch '14086-keepweb-serve-past-versions'
Closes #14086
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 17:50:10 +0000 (13:50 -0400)]
14285: Add tests for LoadToken and RequireLiteralToken.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 17:36:02 +0000 (13:36 -0400)]
14260: Fix workbench functionals test
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Mon, 15 Oct 2018 17:02:29 +0000 (14:02 -0300)]
14086: Add tests to prove that keep-web can serve past collection versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 16:09:35 +0000 (12:09 -0400)]
14260: Fix tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 15 Oct 2018 15:23:18 +0000 (11:23 -0400)]
14285: Merge branch 'master' into 14285-keep-balance-metrics
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 15:09:58 +0000 (11:09 -0400)]
14260: Add invalid remote token test
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 15 Oct 2018 15:02:38 +0000 (11:02 -0400)]
14260: Additional validation when container uuid is provided in token
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 12 Oct 2018 21:34:47 +0000 (17:34 -0400)]
14260: Update API doc for runtime_* fields (token/user_uuid/auth_scopes)
Also add missing documentation for secret_mounts.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 12 Oct 2018 21:07:33 +0000 (17:07 -0400)]
14260: crunch-run constructs a v2 token with added container uuid
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 12 Oct 2018 21:01:23 +0000 (17:01 -0400)]
14260: Container auth tokens must have the container uuid in the 4th position
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 12 Oct 2018 18:56:51 +0000 (14:56 -0400)]
14285: Add keep-balance to health aggregator test stub.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 12 Oct 2018 18:46:02 +0000 (14:46 -0400)]
14260: Don't set auth_uuid when runtime_token is set.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 12 Oct 2018 17:56:22 +0000 (13:56 -0400)]
14285: Add keep-balance to example cluster config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 12 Oct 2018 17:52:08 +0000 (13:52 -0400)]
14285: Add token middleware. Require management token for metrics.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 12 Oct 2018 14:04:04 +0000 (10:04 -0400)]
14285: Update sample config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 12 Oct 2018 14:01:50 +0000 (10:01 -0400)]
14285: Split Server to server.go.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Thu, 11 Oct 2018 22:27:51 +0000 (18:27 -0400)]
14260: Added runtime_token to container record
* runtime_token, runtime_user_uuid and runtime_auth_scopes are now
part of container initialization and reuse decisions
* Determine runtime_user_uuid and runtime_auth_scopes as part of
Container.resolve
* Use runtime_user_uuid to create container token (when runtime_token
is not set)
* act_as runtime_user_uuid when resolving container request fields
* tokens used for runtime_token will be left untouched (remove expire_destroy)
* added/updated/fixed tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 18:36:03 +0000 (15:36 -0300)]
Merge branch '13561-collection-versions-api'
Refs #13561
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 16:17:47 +0000 (13:17 -0300)]
13561: Move versioning code inside locking block.
Also, don't allow current_version_uuid updates on current versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 11 Oct 2018 14:09:37 +0000 (11:09 -0300)]
13561: Fix validation & update related test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Thu, 11 Oct 2018 14:08:08 +0000 (10:08 -0400)]
14260: runtime_token goes in container auth
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 10 Oct 2018 19:58:21 +0000 (15:58 -0400)]
14260: Test container runtime_token
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 20:40:33 +0000 (16:40 -0400)]
14260: Container runtime token wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 19:31:08 +0000 (15:31 -0400)]
14260: Migration adding runtime_token, runtime_user_uuid, runtime_auth_scopes
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 10 Oct 2018 01:16:30 +0000 (22:16 -0300)]
13561: Refactor version creation & sync logic.
* Avoid overriding save! and move code to collection's callbacks.
* Use around_update to make the necessary actions and get a lock before saving.
* Arrange version creation and syncing actions so that they happen after the
current version's update.
* Update test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 20:07:44 +0000 (16:07 -0400)]
Merge branch '14199-copy-from-remote'
refs #14199
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 20:07:17 +0000 (16:07 -0400)]
14199: Reduce logging noise from azure test stubs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 19:56:26 +0000 (15:56 -0400)]
14199: Merge branch 'master' into 14199-copy-from-remote
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 19:51:38 +0000 (15:51 -0400)]
14285: Update metrics doc page.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:20:38 +0000 (15:20 -0400)]
Merge branch '14196-api-v2-tokens' refs #14196
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:19:31 +0000 (15:19 -0400)]
14196: Revert debug change to Access-Control-Max-Age
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 9 Oct 2018 19:16:09 +0000 (15:16 -0400)]
Merge branch '14274-factory-bot' closes #14274
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:36:52 +0000 (11:36 -0400)]
14199: Abandon processing sooner if client disconnects.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:24:44 +0000 (11:24 -0400)]
14199: Rename (*remoteResponseCacher)Flush -> Close.
Finalizing the caching writer is more like Close: it can only happen
once, and only after all Writes are done. Flush means something
different, especially in http.ResponseWriter context.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 9 Oct 2018 15:19:16 +0000 (11:19 -0400)]
14199: Require "X-Keep-Signature: local[, ...]" to invoke signing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 8 Oct 2018 20:43:40 +0000 (16:43 -0400)]
14285: Export stats as prometheus metrics.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 18:09:30 +0000 (14:09 -0400)]
arvbox fix "can't write to /dev/stderr" message no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Fri, 5 Oct 2018 13:09:16 +0000 (10:09 -0300)]
Merge branch 'master' into 13561-collection-versions-api
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 01:36:05 +0000 (21:36 -0400)]
Merge branch '12690-12748-crunchstat-summary'
refs #12690
refs #12748
refs #13759
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 5 Oct 2018 01:27:33 +0000 (21:27 -0400)]
14196: Multi-site search works with v2 tokens.
Also update workbench tests use v2 tokens.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Fri, 5 Oct 2018 00:49:25 +0000 (21:49 -0300)]
13561: Allow request old collection version by UUID.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 21:55:40 +0000 (18:55 -0300)]
13561: Ignore version & current_version_uuid parama on API create endpoint.
Also, updated discovery doc to include 'include_old_versions' param on index.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 18:54:18 +0000 (15:54 -0300)]
13561: Avoid permission links to be attached to past collection versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 4 Oct 2018 18:22:31 +0000 (15:22 -0300)]
13561: Expand index API to include past versions.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 18:01:00 +0000 (14:01 -0400)]
14199: Fix deadlock in test suite.
If a KeepClient has been created using an API server address that is
no longer reachable, calling keepclient.RefreshServiceDiscovery() puts
the poll() goroutine into an endless retry loop, and a second call
never returns because ent.clear is never ready to receive.
Work around this in the pull worker tests by only refreshing services
from the API server actually being used, not on additional ones
referenced by previous test cases.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 14:15:22 +0000 (10:15 -0400)]
14199: Drop Vary response header for non-proxyable requests.
The X-Keep-Signature header is ignored for such requests anyway.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 4 Oct 2018 05:27:19 +0000 (01:27 -0400)]
14199: Store data if X-Keep-Signature given in proxied GET/HEAD req.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 3 Oct 2018 20:38:30 +0000 (16:38 -0400)]
12690 & 12748: Read stats from arv-mount.txt
* Compute elapsed time for containers correctly
* Update tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Wed, 3 Oct 2018 20:11:38 +0000 (17:11 -0300)]
13561: Avoid collections.index to include old versions
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Wed, 3 Oct 2018 19:54:45 +0000 (15:54 -0400)]
14199: Refactor test case.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Wed, 3 Oct 2018 18:01:27 +0000 (14:01 -0400)]
Documentation tweaks. Point at Biostars as the forum to discuss Arvados
questions.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 17:56:16 +0000 (13:56 -0400)]
14274: Fix FactoryGirl deprication warning (renamed to FactoryBot)
Also fix "mocha/mini_test" -> "mocha/minitest" warning.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 3 Oct 2018 13:23:30 +0000 (09:23 -0400)]
Merge branch '13619-fed-object-list' closes #13619
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 21:14:59 +0000 (17:14 -0400)]
14196: Don't crash if element of params[:reader_tokens] is not a String
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 2 Oct 2018 20:50:07 +0000 (16:50 -0400)]
13619: Move configuration options to arvados.Cluster.RequestLimits
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
projects / arvados.git / log