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Merge branch '8886-async-permission-update' refs #8886
[arvados.git]
/
sdk
/
2016-03-29
Peter Amstutz
Fix sdk/cwl test refs #8815
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' closes...
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' into 8654...
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commitdiff
2016-03-29
Peter Amstutz
8654: Make --submit --wait the default mode.
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commitdiff
2016-03-29
Peter Amstutz
8815: Fix syntax errors.
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commitdiff
2016-03-29
Peter Amstutz
8815: Now expect /usr/local/bin/crunchrunner. Bind...
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commitdiff
2016-03-29
Peter Amstutz
8815: Rely on system-provided crunchrunner. Also use...
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commitdiff
2016-03-29
Peter Amstutz
8815: Crunch-job bind mounts crunchrunner binary and...
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commitdiff
2016-03-28
Peter Amstutz
8654: Bump cwltool version dependency and print cwl...
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commitdiff
2016-03-28
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
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commitdiff
2016-03-25
Peter Amstutz
8654: Passes 100% CWL conformance tests using running...
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commitdiff
2016-03-25
Peter Amstutz
8654: --version reports versions for arvados-cwl-runner...
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commitdiff
2016-03-23
Peter Amstutz
Fix merge conflict. refs #8766
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commitdiff
2016-03-23
Peter Amstutz
Merge branch '8766-cwl-collection-project'
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commitdiff
2016-03-23
Peter Amstutz
Merge branch 'master' into 8766-cwl-collection-project
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commitdiff
2016-03-23
Peter Amstutz
Merge branch '8766-cwl-collection-project' into 8654...
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commitdiff
2016-03-23
Peter Amstutz
8766: Refactor logic to copy output collection and...
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commitdiff
2016-03-23
Ward Vandewege
Fix sdk/cwl tests after commit 9df4d7da24ef8be639af1ab8...
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commitdiff
2016-03-22
Peter Amstutz
8766: Port logic from arv-run-pipeline-instance for...
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commitdiff
2016-03-22
Peter Amstutz
8654: Bump cwltool version
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commitdiff
2016-03-22
Peter Amstutz
8654: Use iterator instead of readlines() when going...
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commitdiff
2016-03-22
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
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commitdiff
2016-03-22
Peter Amstutz
Crunchrunner fix connect os.Stderr to cmd.Stderr &...
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commitdiff
2016-03-22
Peter Amstutz
8654: Remove print statements.
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commitdiff
2016-03-22
Peter Amstutz
8654: Handle error on capturing runner output
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commitdiff
2016-03-22
Peter Amstutz
8654: Support --quiet
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commitdiff
2016-03-22
Peter Amstutz
8654: Support waiting for submitted runner job to complete
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commitdiff
2016-03-22
Peter Amstutz
8654: Upload Docker images
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commitdiff
2016-03-22
Peter Amstutz
8654: Bump arvados-cwl-runner version dependency on...
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commitdiff
2016-03-22
Peter Amstutz
8654: When uploading, reuse existing collections with...
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commitdiff
2016-03-21
Peter Amstutz
8654: Bump arvados-cwl-runner version dependency on...
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commitdiff
2016-03-21
Peter Amstutz
8654: Add runner job to pipeline instance.
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commitdiff
2016-03-21
Peter Amstutz
8654: Fix keeppath and add ensure_unique_name to upload.
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commitdiff
2016-03-21
Peter Amstutz
8654: Scanning for and uploading dependencies for submi...
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commitdiff
2016-03-21
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
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commitdiff
2016-03-18
Brett Smith
Merge branch '7852-readline-cache-fix-wip'
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commitdiff
2016-03-18
Brett Smith
7852: Bugfix _filepos tracking in PySDK readline method.
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commitdiff
2016-03-18
radhika
7852: Added one more test "test_readline_then_readall...
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commitdiff
2016-03-18
radhika
7852: add a failing test that does: readline and then...
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commitdiff
2016-03-18
Peter Amstutz
Fix log scanning for "crunchrunner: $(task.outdir)...
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commitdiff
2016-03-17
Tom Clegg
gofmt. refs #8754
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commitdiff
2016-03-17
Peter Amstutz
8654: Resource upload WIP
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commitdiff
2016-03-17
Peter Amstutz
Improve exception reporting for arvados-cwl-runner...
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commitdiff
2016-03-17
Brett Smith
8752: Skip unreliable Python SDK Keep test.
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commitdiff
2016-03-17
radhika
Merge branch '8561-node-pairing' of git.curoverse.com...
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commitdiff
2016-03-16
radhika
Merge branch 'master' into 8561-node-pairing
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commitdiff
2016-03-16
radhika
Merge branch 'master' into 8554-trash-untrash-unix...
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commitdiff
2016-03-16
Peter Amstutz
Merge branch 'master' into 6518-crunch2-dispatch-slurm
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commitdiff
2016-03-15
Tom Clegg
Merge branch '8491-import-build-tools' refs #8491
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commitdiff
2016-03-15
Brett Smith
8203/8690: crunch-job uses `srun --nodes=1`.
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commitdiff
2016-03-14
Peter Amstutz
Really fix cwl-runner tests this time. refs #8673
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commitdiff
2016-03-14
Peter Amstutz
Fix cwl-runner tests. refs #8673
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commitdiff
2016-03-14
Peter Amstutz
Merge branch '8673-cwl-runner-project-uuid' closes...
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commitdiff
2016-03-11
Peter Amstutz
8654: Collect output files into output collection,...
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commitdiff
2016-03-11
Peter Amstutz
Merge branch '8673-cwl-runner-project-uuid' into 8654...
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commitdiff
2016-03-11
Peter Amstutz
8654: Passes in local testing.
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commitdiff
2016-03-11
Peter Amstutz
8673: Fix --project-uuid for arv-keepdocker upload.
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commitdiff
2016-03-11
Tom Clegg
8491: Merge branch 'master' into 8491-import-build...
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commitdiff
2016-03-11
Tom Clegg
8491: 8222: Prohibit activesupport 4.2.6 so our gem...
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commitdiff
2016-03-11
Tom Clegg
Add 'build/' from commit '555b039609a3c8700c27767c255fd...
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commitdiff
2016-03-11
Peter Amstutz
8673: Report pipeline instance uuid. Reuse jobs by...
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commitdiff
2016-03-11
radhika
closes #8558
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commitdiff
2016-03-11
radhika
Merge branch 'master' into 8558-cwl-propagate-resource-req
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commitdiff
2016-03-11
Peter Amstutz
8673: Typo fix for --project-uuid. Refactor main loop...
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commitdiff
2016-03-10
radhika
8558: when cores not found in resources, use default.
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commitdiff
2016-03-10
Peter Amstutz
8673: Adding --project-uuid so resources are created...
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commitdiff
2016-03-10
radhika
8558: compacted code
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commitdiff
2016-03-09
Peter Amstutz
8636: Fix ArvPathMapper.reversemap to return a tuple...
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commitdiff
2016-03-09
radhika
8558: update field names and ensure the tests pass
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commitdiff
2016-03-09
radhika
closes #8508
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commitdiff
2016-03-08
Peter Amstutz
8558: Add test case for running ArvadosCommandTool
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commitdiff
2016-03-04
radhika
8558: include min_scratch_mb_per_node in the keys propa...
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commitdiff
2016-03-04
radhika
Merge branch 'master' into 8558-cwl-propagate-resource-req
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commitdiff
2016-03-04
Peter Amstutz
CWL test select config, refs #8558
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commitdiff
2016-03-04
Peter Amstutz
Bugfix for CWL conformance test script, refs #8558
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commitdiff
2016-03-04
Peter Amstutz
Self test script for running CWL conformance tests...
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commitdiff
2016-03-04
radhika
8558: add min_cores_per_node and min_ram_mb_per_node...
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commitdiff
2016-03-03
radhika
Merge branch '8497-datamanager-batchsize-1000' of https...
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8620-better-README' closes #8620
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8488-cwl-crunchrunner-collection' closes...
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commitdiff
2016-03-03
radhika
Merge branch '8508-datamanager-test-badpaths' of https...
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commitdiff
2016-03-03
Peter Amstutz
8488: Fix reverse mapping for references to input files...
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commitdiff
2016-03-02
Tom Clegg
Merge branch '7263-batch-task-lookup' closes #7263
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commitdiff
2016-03-02
Tom Clegg
7263: Let arvados library do the json encoding.
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commitdiff
2016-03-02
Tom Clegg
7263: Check new tasks after a task completes, even...
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commitdiff
2016-03-02
Joshua Randall
7263: Updates reapchildren to perform API query for...
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commitdiff
2016-03-02
radhika
closes #7399
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commitdiff
2016-03-02
Tom Clegg
Merge branch '8099-babysit-all-srun' closes #8099
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commitdiff
2016-03-02
Tom Clegg
Merge branch 'master' into 8099-babysit-all-srun
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commitdiff
2016-03-02
Tom Clegg
8099: Remove duplicated line
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commitdiff
2016-03-02
Tom Clegg
Merge branch '8343-cgroup-root' closes #8343
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commitdiff
2016-03-02
Tom Clegg
8343: Allow overriding -cgroup-root=/sys/fs/cgroup...
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commitdiff
2016-03-02
Peter Amstutz
8488: Match line beginnings
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commitdiff
2016-03-02
Peter Amstutz
Merge branch '8231-publish-arvbox' closes #8231
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commitdiff
2016-03-02
Peter Amstutz
8488: Set docker_outdir to get correct outdir in comman...
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commitdiff
2016-03-02
Peter Amstutz
8488: Determine actual output dir from reading logs...
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commitdiff
2016-03-01
Brett Smith
8373: Expand crunch-job regexp to detect more Keep...
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commitdiff
2016-03-01
Peter Amstutz
Merge branch '8015-crunch2-mount' closes #8015
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commitdiff
2016-03-01
Peter Amstutz
Add 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89...
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commitdiff
2016-03-01
Peter Amstutz
Merge branch '6605-arv-copy-http' closes #6605
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