--- /dev/null
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
+import { runProcess } from "./run-process-panel-actions";
+import { RUN_PROCESS_BASIC_FORM } from "views/run-process-panel/run-process-basic-form";
+import { RUN_PROCESS_INPUTS_FORM } from "views/run-process-panel/run-process-inputs-form";
+import { navigateTo } from "store/navigation/navigation-action";
+
+describe("run-process-panel-actions", () => {
+ describe("runProcess", () => {
+ const newProcessUUID = 'newProcessUUID';
+ let dispatch, getState, services;
+
+ beforeEach(() => {
+ dispatch = cy.spy();
+ services = {
+ containerRequestService: {
+ create: cy.stub().callsFake(async () => ({
+ uuid: newProcessUUID,
+ })),
+ },
+ };
+ cy.spy(navigateTo).as('navigateTo');
+ });
+
+ it("should return when userUuid is null", async () => {
+ // given
+ getState = () => ({
+ auth: {},
+ });
+
+ // when
+ await runProcess(dispatch, getState, services);
+
+ // then
+ expect(dispatch).not.to.be.called;
+ });
+
+ it("should run workflow with project-uuid", async () => {
+ // given
+ getState = () => ({
+ auth: {
+ user: {
+ email: "test@gmail.com",
+ firstName: "TestFirstName",
+ lastName: "TestLastName",
+ uuid: "zzzzz-tpzed-yid70bw31f51234",
+ ownerUuid: "zzzzz-tpzed-000000000000000",
+ isAdmin: false,
+ isActive: true,
+ username: "testfirstname",
+ prefs: {
+ profile: {},
+ },
+ },
+ },
+ runProcessPanel: {
+ processPathname: "/projects/zzzzz-tpzed-yid70bw31f51234",
+ processOwnerUuid: "zzzzz-tpzed-yid70bw31f51234",
+ selectedWorkflow: {
+ href: "/workflows/zzzzz-7fd4e-2tlnerdkxnl4fjt",
+ kind: "arvados#workflow",
+ etag: "8gh5xlhlgo61yqscyl1spw8tc",
+ uuid: "zzzzz-7fd4e-2tlnerdkxnl4fjt",
+ ownerUuid: "zzzzz-tpzed-o4njwilpp4ov321",
+ createdAt: "2020-07-15T19:40:50.296041000Z",
+ modifiedByClientUuid: "zzzzz-ozdt8-libnr89sc5nq111",
+ modifiedByUserUuid: "zzzzz-tpzed-o4njwilpp4ov321",
+ modifiedAt: "2020-07-15T19:40:50.296376000Z",
+ name: "revsort.cwl",
+ description:
+ "Reverse the lines in a document, then sort those lines.",
+ definition:
+ '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "hints":[{"class":"http://arvados.org/cwl#WorkflowRunnerResources","acrContainerImage":"arvados/jobs:2.0.4", "ramMin": 16000}], "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
+ },
+ },
+ form: {
+ [RUN_PROCESS_BASIC_FORM]: {
+ values: {
+ name: "basicFormTestName",
+ description: "basicFormTestDescription",
+ },
+ },
+ [RUN_PROCESS_INPUTS_FORM]: {
+ values: {
+ inputs: {},
+ }
+ }
+ },
+ });
+
+ // when
+ await runProcess(dispatch, getState, services);
+
+ // then
+ expect(services.containerRequestService.create).to.be.calledWithMatch(testCreateArgs);
+
+ // expect(dispatch).to.be.calledWith(newProcessUUID);
+ expect(dispatch).to.be.calledWithMatch(navigateTo(newProcessUUID));
+ });
+ });
+});
+
+const testMounts = {
+ '/var/spool/cwl': {
+ kind: 'collection',
+ writable: true,
+ },
+ stdout: {
+ kind: 'file',
+ path: '/var/spool/cwl/cwl.output.json',
+ },
+ '/var/lib/cwl/workflow.json': {
+ kind: 'json',
+ content: {
+ $graph: [
+ {
+ class: 'Workflow',
+ doc: 'Reverse the lines in a document, then sort those lines.',
+ id: '#main',
+ hints: [
+ {
+ class: 'http://arvados.org/cwl#WorkflowRunnerResources',
+ acrContainerImage: 'arvados/jobs:2.0.4',
+ ramMin: 16000,
+ },
+ ],
+ inputs: [
+ {
+ default: null,
+ doc: 'The input file to be processed.',
+ id: '#main/input',
+ type: 'File',
+ },
+ {
+ default: true,
+ doc: 'If true, reverse (decending) sort',
+ id: '#main/reverse_sort',
+ type: 'boolean',
+ },
+ ],
+ outputs: [
+ {
+ doc: 'The output with the lines reversed and sorted.',
+ id: '#main/output',
+ outputSource: '#main/sorted/output',
+ type: 'File',
+ },
+ ],
+ steps: [
+ {
+ id: '#main/rev',
+ in: [
+ {
+ id: '#main/rev/input',
+ source: '#main/input',
+ },
+ ],
+ out: ['#main/rev/output'],
+ run: '#revtool.cwl',
+ },
+ {
+ id: '#main/sorted',
+ in: [
+ {
+ id: '#main/sorted/input',
+ source: '#main/rev/output',
+ },
+ {
+ id: '#main/sorted/reverse',
+ source: '#main/reverse_sort',
+ },
+ ],
+ out: ['#main/sorted/output'],
+ run: '#sorttool.cwl',
+ },
+ ],
+ },
+ {
+ baseCommand: 'rev',
+ class: 'CommandLineTool',
+ doc: 'Reverse each line using the `rev` command',
+ hints: [
+ {
+ class: 'ResourceRequirement',
+ ramMin: 8,
+ },
+ ],
+ id: '#revtool.cwl',
+ inputs: [
+ {
+ id: '#revtool.cwl/input',
+ inputBinding: {},
+ type: 'File',
+ },
+ ],
+ outputs: [
+ {
+ id: '#revtool.cwl/output',
+ outputBinding: {
+ glob: 'output.txt',
+ },
+ type: 'File',
+ },
+ ],
+ stdout: 'output.txt',
+ },
+ {
+ baseCommand: 'sort',
+ class: 'CommandLineTool',
+ doc: 'Sort lines using the `sort` command',
+ hints: [
+ {
+ class: 'ResourceRequirement',
+ ramMin: 8,
+ },
+ ],
+ id: '#sorttool.cwl',
+ inputs: [
+ {
+ id: '#sorttool.cwl/reverse',
+ inputBinding: {
+ position: 1,
+ prefix: '-r',
+ },
+ type: 'boolean',
+ },
+ {
+ id: '#sorttool.cwl/input',
+ inputBinding: {
+ position: 2,
+ },
+ type: 'File',
+ },
+ ],
+ outputs: [
+ {
+ id: '#sorttool.cwl/output',
+ outputBinding: {
+ glob: 'output.txt',
+ },
+ type: 'File',
+ },
+ ],
+ stdout: 'output.txt',
+ },
+ ],
+ cwlVersion: 'v1.0',
+ },
+ },
+ '/var/lib/cwl/cwl.input.json': {
+ kind: 'json',
+ content: {
+ '': {},
+ },
+ },
+};
+
+const testCreateArgs = {
+ command: [
+ 'arvados-cwl-runner',
+ '--api=containers',
+ '--local',
+ '--project-uuid=zzzzz-tpzed-yid70bw31f51234',
+ '/var/lib/cwl/workflow.json#main',
+ '/var/lib/cwl/cwl.input.json',
+ ],
+ containerImage: 'arvados/jobs:2.0.4',
+ cwd: '/var/spool/cwl',
+ description: 'basicFormTestDescription',
+ mounts: testMounts,
+ name: 'basicFormTestName',
+ outputName: 'Output from basicFormTestName',
+ outputPath: '/var/spool/cwl',
+ ownerUuid: 'zzzzz-tpzed-yid70bw31f51234',
+ priority: 500,
+ properties: {
+ workflowName: 'revsort.cwl',
+ template_uuid: 'zzzzz-7fd4e-2tlnerdkxnl4fjt',
+ },
+ runtimeConstraints: {
+ API: true,
+ ram: 16256 * (1024 * 1024),
+ vcpus: 1,
+ },
+ schedulingParameters: { max_run_time: undefined },
+ state: 'Committed',
+ useExisting: false,
+};
\ No newline at end of file
+++ /dev/null
-// Copyright (C) The Arvados Authors. All rights reserved.
-//
-// SPDX-License-Identifier: AGPL-3.0
-
-import { runProcess } from "./run-process-panel-actions";
-
-jest.mock("../navigation/navigation-action", () => ({
- navigateTo: (link: any) => link,
-}));
-
-jest.mock("models/process", () => ({
- createWorkflowMounts: jest.fn(),
-}));
-
-jest.mock("redux-form", () => ({
- reduxForm: () => (c: any) => c,
- getFormValues: (name: string) => () => {
- switch (name) {
- case "runProcessBasicForm":
- return {
- name: "basicFormTestName",
- description: "basicFormTestDescription",
- };
- case "runProcessInputsForm":
- return {};
- default:
- return null;
- }
- },
-}));
-
-describe("run-process-panel-actions", () => {
- describe("runProcess", () => {
- const newProcessUUID = 'newProcessUUID';
- let dispatch: any, getState: any, services: any;
-
- beforeEach(() => {
- dispatch = jest.fn();
- services = {
- containerRequestService: {
- create: jest.fn().mockImplementation(async () => ({
- uuid: newProcessUUID,
- })),
- },
- };
- });
-
- it("should return when userUuid is null", async () => {
- // given
- getState = () => ({
- auth: {},
- });
-
- // when
- await runProcess(dispatch, getState, services);
-
- // then
- expect(dispatch).not.toHaveBeenCalled();
- });
-
- it("should run workflow with project-uuid", async () => {
- // given
- getState = () => ({
- auth: {
- user: {
- email: "test@gmail.com",
- firstName: "TestFirstName",
- lastName: "TestLastName",
- uuid: "zzzzz-tpzed-yid70bw31f51234",
- ownerUuid: "zzzzz-tpzed-000000000000000",
- isAdmin: false,
- isActive: true,
- username: "testfirstname",
- prefs: {
- profile: {},
- },
- },
- },
- runProcessPanel: {
- processPathname: "/projects/zzzzz-tpzed-yid70bw31f51234",
- processOwnerUuid: "zzzzz-tpzed-yid70bw31f51234",
- selectedWorkflow: {
- href: "/workflows/zzzzz-7fd4e-2tlnerdkxnl4fjt",
- kind: "arvados#workflow",
- etag: "8gh5xlhlgo61yqscyl1spw8tc",
- uuid: "zzzzz-7fd4e-2tlnerdkxnl4fjt",
- ownerUuid: "zzzzz-tpzed-o4njwilpp4ov321",
- createdAt: "2020-07-15T19:40:50.296041000Z",
- modifiedByClientUuid: "zzzzz-ozdt8-libnr89sc5nq111",
- modifiedByUserUuid: "zzzzz-tpzed-o4njwilpp4ov321",
- modifiedAt: "2020-07-15T19:40:50.296376000Z",
- name: "revsort.cwl",
- description:
- "Reverse the lines in a document, then sort those lines.",
- definition:
- '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "hints":[{"class":"http://arvados.org/cwl#WorkflowRunnerResources","acrContainerImage":"arvados/jobs:2.0.4", "ramMin": 16000}], "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
- },
- },
- });
-
- // when
- await runProcess(dispatch, getState, services);
-
- // then
- expect(services.containerRequestService.create).toHaveBeenCalledWith({
- command: [
- "arvados-cwl-runner",
- "--api=containers",
- "--local",
- "--project-uuid=zzzzz-tpzed-yid70bw31f51234",
- "/var/lib/cwl/workflow.json#main",
- "/var/lib/cwl/cwl.input.json",
- ],
- containerImage: "arvados/jobs:2.0.4",
- cwd: "/var/spool/cwl",
- description: "basicFormTestDescription",
- mounts: undefined,
- name: "basicFormTestName",
- outputName: "Output from basicFormTestName",
- outputPath: "/var/spool/cwl",
- ownerUuid: "zzzzz-tpzed-yid70bw31f51234",
- priority: 500,
- properties: {
- workflowName: "revsort.cwl",
- template_uuid: "zzzzz-7fd4e-2tlnerdkxnl4fjt",
- },
- runtimeConstraints: {
- API: true,
- ram: 16256 * (1024 * 1024),
- vcpus: 1,
- },
- schedulingParameters: { max_run_time: undefined },
- state: "Committed",
- useExisting: false
- });
-
- // and
- expect(dispatch).toHaveBeenCalledWith(newProcessUUID);
- });
- });
-});
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