Changes related to https://dev.arvados.org/issues/15888#note-25

refs #15888

Arvados-DCO-1.1-Signed-off-by: Nico Cesar <nico@curii.com>

diff --git a/build/run-library.sh b/build/run-library.sh
index bbc1048a4a09f7f4f2ad8b424bb949d8f70a97ae..528d69d9982eac69e561a3ab7078488a94093d61 100755 (executable)
--- a/build/run-library.sh
+++ b/build/run-library.sh
@@ -1,4 +1,4 @@
-#!/bin/bash -e
+#!/bin/bash -xe
 # Copyright (C) The Arvados Authors. All rights reserved.
 #
 # SPDX-License-Identifier: AGPL-3.0

diff --git a/build/run-tests.sh b/build/run-tests.sh
index 05efdabe9e9fbdf563cc9dbada34c8fbd9001373..757f6182c0bdd8ed5078753ee30bc9f38848d8e0 100755 (executable)
--- a/build/run-tests.sh
+++ b/build/run-tests.sh
@@ -555,7 +555,7 @@ setup_ruby_environment() {
                 fi
             done
             "$bundle" version | tee /dev/stderr | grep -q 'version 2'
-        ) #|| fatal 'install bundler' ## This is needed for now.
+        ) || fatal 'install bundler'
     fi
 }
 
@@ -651,7 +651,7 @@ install_env() {
         set -e
         "${VENV3DIR}/bin/pip3" install wheel
         "${VENV3DIR}/bin/pip3" install PyYAML
-        "${VENV3DIR}/bin/pip3" install httplib2 
+        "${VENV3DIR}/bin/pip3" install httplib2
         "${VENV3DIR}/bin/pip3" install future
         "${VENV3DIR}/bin/pip3" install google-api-python-client
         "${VENV3DIR}/bin/pip3" install ciso8601
@@ -956,7 +956,7 @@ install_services/api() {
             || return 1
 
     (
-        set -e
+        set -ex
         cd "$WORKSPACE/services/api"
         export RAILS_ENV=test
         if "$bundle" exec rails db:environment:set ; then
@@ -1090,19 +1090,12 @@ install_all() {
     do_install sdk/perl
     do_install sdk/cli
     do_install services/login-sync
-    ## FIXME, ignore all python2
     for p in "${pythonstuff[@]}"
     do
-        dir=${p%:py3}
-        if [[ ${dir} = ${p} ]]; then
-            if [[ -z ${skip[python2]} ]]; then
-                do_install ${dir} pip
-            fi
-        elif [[ -n ${PYTHON3} ]]; then
-            if [[ -z ${skip[python3]} ]]; then
-                do_install ${dir} pip "$VENV3DIR/bin/"
-            fi
-        fi
+       dir=${p%:py3}
+       if [[ -z ${skip[python3]} ]]; then
+           do_install ${dir} pip "$VENV3DIR/bin/"
+       fi
     done
     for g in "${gostuff[@]}"
     do
@@ -1130,18 +1123,11 @@ test_all() {
     do_test sdk/cli
     do_test services/login-sync
     do_test sdk/java-v2
-    ## FIXME, ignore all python2
     for p in "${pythonstuff[@]}"
     do
         dir=${p%:py3}
-        if [[ ${dir} = ${p} ]]; then
-            if [[ -z ${skip[python2]} ]]; then
-                do_test ${dir} pip
-            fi
-        elif [[ -n ${PYTHON3} ]]; then
-            if [[ -z ${skip[python3]} ]]; then
-                do_test ${dir} pip "$VENV3DIR/bin/"
-            fi
+        if [[ -z ${skip[python3]} ]]; then
+            do_test ${dir} pip "$VENV3DIR/bin/"
         fi
     done
 

diff --git a/go.mod b/go.mod
index 0aa5ca0b1ff8dd8afd2e5feaea77b7dd897e28c7..262978d9125d412b32bfee22508bcfe517de8ec6 100644 (file)
--- a/go.mod
+++ b/go.mod
@@ -60,10 +60,9 @@ require (
        github.com/src-d/gcfg v1.3.0 // indirect
        github.com/xanzy/ssh-agent v0.1.0 // indirect
        golang.org/x/crypto v0.0.0-20200622213623-75b288015ac9
-       golang.org/x/net v0.0.0-20200625001655-4c5254603344
+       golang.org/x/net v0.0.0-20200202094626-16171245cfb2
        golang.org/x/oauth2 v0.0.0-20190604053449-0f29369cfe45
-       golang.org/x/sys v0.0.0-20200323222414-85ca7c5b95cd
-       golang.org/x/tools v0.0.0-20200827143046-df83f4e7c16e // indirect
+       golang.org/x/sys v0.0.0-20191105231009-c1f44814a5cd
        google.golang.org/api v0.13.0
        gopkg.in/asn1-ber.v1 v1.0.0-20181015200546-f715ec2f112d // indirect
        gopkg.in/check.v1 v1.0.0-20161208181325-20d25e280405

diff --git a/go.sum b/go.sum
index 0a395cd8f8a3c23fcf4cc90482ba1267cc6c6ce6..85d205112fb95ecf1895d96122686e0e2e2a849b 100644 (file)
--- a/go.sum
+++ b/go.sum
@@ -236,7 +236,6 @@ github.com/stretchr/testify v1.4.0 h1:2E4SXV/wtOkTonXsotYi4li6zVWxYlZuYNCXe9XRJy
 github.com/stretchr/testify v1.4.0/go.mod h1:j7eGeouHqKxXV5pUuKE4zz7dFj8WfuZ+81PSLYec5m4=
 github.com/xanzy/ssh-agent v0.1.0 h1:lOhdXLxtmYjaHc76ZtNmJWPg948y/RnT+3N3cvKWFzY=
 github.com/xanzy/ssh-agent v0.1.0/go.mod h1:0NyE30eGUDliuLEHJgYte/zncp2zdTStcOnWhgSqHD8=
-github.com/yuin/goldmark v1.1.32/go.mod h1:3hX8gzYuyVAZsxl0MRgGTJEmQBFcNTphYh9decYSb74=
 go.opencensus.io v0.21.0 h1:mU6zScU4U1YAFPHEHYk+3JC4SY7JxgkqS10ZOSyksNg=
 go.opencensus.io v0.21.0/go.mod h1:mSImk1erAIZhrmZN+AvHh14ztQfjbGwt4TtuofqLduU=
 golang.org/x/crypto v0.0.0-20180904163835-0709b304e793/go.mod h1:6SG95UA2DQfeDnfUPMdvaQW0Q7yPrPDi9nlGo2tz2b4=
@@ -252,8 +251,6 @@ golang.org/x/lint v0.0.0-20190227174305-5b3e6a55c961/go.mod h1:wehouNa3lNwaWXcvx
 golang.org/x/lint v0.0.0-20190301231843-5614ed5bae6f/go.mod h1:UVdnD1Gm6xHRNCYTkRU2/jEulfH38KcIWyp/GAMgvoE=
 golang.org/x/lint v0.0.0-20190313153728-d0100b6bd8b3/go.mod h1:6SW0HCj/g11FgYtHlgUYUwCkIfeOF89ocIRzGO/8vkc=
 golang.org/x/lint v0.0.0-20190409202823-959b441ac422/go.mod h1:6SW0HCj/g11FgYtHlgUYUwCkIfeOF89ocIRzGO/8vkc=
-golang.org/x/mod v0.3.0 h1:RM4zey1++hCTbCVQfnWeKs9/IEsaBLA8vTkd0WVtmH4=
-golang.org/x/mod v0.3.0/go.mod h1:s0Qsj1ACt9ePp/hMypM3fl4fZqREWJwdYDEqhRiZZUA=
 golang.org/x/net v0.0.0-20180724234803-3673e40ba225/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20180826012351-8a410e7b638d/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20181114220301-adae6a3d119a/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
@@ -270,8 +267,6 @@ golang.org/x/net v0.0.0-20190620200207-3b0461eec859 h1:R/3boaszxrf1GEUWTVDzSKVwL
 golang.org/x/net v0.0.0-20190620200207-3b0461eec859/go.mod h1:z5CRVTTTmAJ677TzLLGU+0bjPO0LkuOLi4/5GtJWs/s=
 golang.org/x/net v0.0.0-20200202094626-16171245cfb2 h1:CCH4IOTTfewWjGOlSp+zGcjutRKlBEZQ6wTn8ozI/nI=
 golang.org/x/net v0.0.0-20200202094626-16171245cfb2/go.mod h1:z5CRVTTTmAJ677TzLLGU+0bjPO0LkuOLi4/5GtJWs/s=
-golang.org/x/net v0.0.0-20200625001655-4c5254603344 h1:vGXIOMxbNfDTk/aXCmfdLgkrSV+Z2tcbze+pEc3v5W4=
-golang.org/x/net v0.0.0-20200625001655-4c5254603344/go.mod h1:/O7V0waA8r7cgGh81Ro3o1hOxt32SMVPicZroKQ2sZA=
 golang.org/x/oauth2 v0.0.0-20180821212333-d2e6202438be/go.mod h1:N/0e6XlmueqKjAGxoOufVs8QHGRruUQn6yWY3a++T0U=
 golang.org/x/oauth2 v0.0.0-20190226205417-e64efc72b421/go.mod h1:gOpvHmFTYa4IltrdGE7lF6nIHvwfUNPOp7c8zoXwtLw=
 golang.org/x/oauth2 v0.0.0-20190604053449-0f29369cfe45 h1:SVwTIAaPC2U/AvvLNZ2a7OVsmBpC8L5BlwK1whH3hm0=
@@ -281,7 +276,6 @@ golang.org/x/sync v0.0.0-20181108010431-42b317875d0f/go.mod h1:RxMgew5VJxzue5/jJ
 golang.org/x/sync v0.0.0-20181221193216-37e7f081c4d4/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20190227155943-e225da77a7e6/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sync v0.0.0-20190423024810-112230192c58/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
-golang.org/x/sync v0.0.0-20200625203802-6e8e738ad208/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
 golang.org/x/sys v0.0.0-20180830151530-49385e6e1522/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
 golang.org/x/sys v0.0.0-20180905080454-ebe1bf3edb33/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
 golang.org/x/sys v0.0.0-20181116152217-5ac8a444bdc5/go.mod h1:STP8DvDyc/dI5b8T5hshtkjS+E42TnysNCUPdjciGhY=
@@ -294,8 +288,6 @@ golang.org/x/sys v0.0.0-20191005200804-aed5e4c7ecf9/go.mod h1:h1NjWce9XRLGQEsW7w
 golang.org/x/sys v0.0.0-20191010194322-b09406accb47/go.mod h1:h1NjWce9XRLGQEsW7wpKNCjG9DtNlClVuFLEZdDNbEs=
 golang.org/x/sys v0.0.0-20191105231009-c1f44814a5cd h1:3x5uuvBgE6oaXJjCOvpCC1IpgJogqQ+PqGGU3ZxAgII=
 golang.org/x/sys v0.0.0-20191105231009-c1f44814a5cd/go.mod h1:h1NjWce9XRLGQEsW7wpKNCjG9DtNlClVuFLEZdDNbEs=
-golang.org/x/sys v0.0.0-20200323222414-85ca7c5b95cd h1:xhmwyvizuTgC2qz7ZlMluP20uW+C3Rm0FD/WLDX8884=
-golang.org/x/sys v0.0.0-20200323222414-85ca7c5b95cd/go.mod h1:h1NjWce9XRLGQEsW7wpKNCjG9DtNlClVuFLEZdDNbEs=
 golang.org/x/text v0.3.0/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
 golang.org/x/text v0.3.1-0.20180807135948-17ff2d5776d2/go.mod h1:NqM8EUOU14njkJ3fqMW+pc6Ldnwhi/IjpwHt7yyuwOQ=
 golang.org/x/text v0.3.2 h1:tW2bmiBqwgJj/UpqtC8EpXEZVYOwU0yG4iWbprSVAcs=
@@ -309,18 +301,6 @@ golang.org/x/tools v0.0.0-20190311212946-11955173bddd/go.mod h1:LCzVGOaR6xXOjkQ3
 golang.org/x/tools v0.0.0-20190312170243-e65039ee4138/go.mod h1:LCzVGOaR6xXOjkQ3onu1FJEFr0SW1gC7cKk1uF8kGRs=
 golang.org/x/tools v0.0.0-20190506145303-2d16b83fe98c h1:97SnQk1GYRXJgvwZ8fadnxDOWfKvkNQHH3CtZntPSrM=
 golang.org/x/tools v0.0.0-20190506145303-2d16b83fe98c/go.mod h1:RgjU9mgBXZiqYHBnxXauZ1Gv1EHHAz9KjViQ78xBX0Q=
-golang.org/x/tools v0.0.0-20191119224855-298f0cb1881e/go.mod h1:b+2E5dAYhXwXZwtnZ6UAqBI28+e2cm9otk0dWdXHAEo=
-golang.org/x/tools v0.0.0-20200823205832-c024452afbcd h1:KNSumuk5eGuQV7zbOrDDZ3MIkwsQr0n5oKiH4oE0/hU=
-golang.org/x/tools v0.0.0-20200823205832-c024452afbcd/go.mod h1:njjCfa9FT2d7l9Bc6FUM5FLjQPp3cFF28FI3qnDFljA=
-golang.org/x/tools v0.0.0-20200825210148-b72e8bb66c93 h1:ErMtKusKMWYK6suW/qFH25m7nbhn43A4862xbps5PPE=
-golang.org/x/tools v0.0.0-20200825210148-b72e8bb66c93/go.mod h1:njjCfa9FT2d7l9Bc6FUM5FLjQPp3cFF28FI3qnDFljA=
-golang.org/x/tools v0.0.0-20200826040757-bc8aaaa29e06 h1:ChBCbOHeLqK+j+znGPlWCcvx/t2PdxmyPBheVZxXbcc=
-golang.org/x/tools v0.0.0-20200826040757-bc8aaaa29e06/go.mod h1:njjCfa9FT2d7l9Bc6FUM5FLjQPp3cFF28FI3qnDFljA=
-golang.org/x/tools v0.0.0-20200827143046-df83f4e7c16e h1:2EJKL5VuS+mDJ/DM+ZLemhhtQrbDqUm2a0QouzMOV8E=
-golang.org/x/tools v0.0.0-20200827143046-df83f4e7c16e/go.mod h1:njjCfa9FT2d7l9Bc6FUM5FLjQPp3cFF28FI3qnDFljA=
-golang.org/x/xerrors v0.0.0-20190717185122-a985d3407aa7/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
-golang.org/x/xerrors v0.0.0-20191011141410-1b5146add898/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
-golang.org/x/xerrors v0.0.0-20191204190536-9bdfabe68543 h1:E7g+9GITq07hpfrRu66IVDexMakfv52eLZ2CXBWiKr4=
 golang.org/x/xerrors v0.0.0-20191204190536-9bdfabe68543/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
 google.golang.org/api v0.4.0/go.mod h1:8k5glujaEP+g9n7WNsDg8QP6cUVNI86fCNMcbazEtwE=
 google.golang.org/api v0.13.0 h1:Q3Ui3V3/CVinFWFiW39Iw0kMuVrRzYX0wN6OPFp0lTA=