git.arvados.org - arvados.git/commit

author	Peter Amstutz <pamstutz@veritasgenetics.com>
	Tue, 6 Aug 2019 19:20:47 +0000 (15:20 -0400)
committer	Peter Amstutz <pamstutz@veritasgenetics.com>
	Wed, 7 Aug 2019 19:16:46 +0000 (15:16 -0400)
commit	4d56f9b913fcf41fbf89bf5016463b5353fa3a9f
tree	95d5b377b7afcf268011a1d88f8e6392b530c660	tree \| snapshot
parent	07d92519438a592d531f2c7558cd51788da262ca	commit \| diff

15133: Delete crunch_scripts, start clearing out API server

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

42 files changed:

crunch_scripts/GATK2-VariantFiltration	[deleted file]	blob \| history
crunch_scripts/GATK2-bqsr	[deleted file]	blob \| history
crunch_scripts/GATK2-merge-call	[deleted file]	blob \| history
crunch_scripts/GATK2-realign	[deleted file]	blob \| history
crunch_scripts/arvados-bcbio-nextgen.py	[deleted file]	blob \| history
crunch_scripts/arvados_bwa.py	[deleted file]	blob \| history
crunch_scripts/arvados_gatk2.py	[deleted file]	blob \| history
crunch_scripts/arvados_ipc.py	[deleted file]	blob \| history
crunch_scripts/arvados_picard.py	[deleted file]	blob \| history
crunch_scripts/arvados_samtools.py	[deleted file]	blob \| history
crunch_scripts/bwa-aln	[deleted file]	blob \| history
crunch_scripts/bwa-index	[deleted file]	blob \| history
crunch_scripts/collection-merge	[deleted file]	blob \| history
crunch_scripts/crunchrunner	[deleted file]	blob \| history
crunch_scripts/crunchutil/__init__.py	[deleted file]	blob \| history
crunch_scripts/crunchutil/robust_put.py	[deleted file]	blob \| history
crunch_scripts/crunchutil/subst.py	[deleted file]	blob \| history
crunch_scripts/crunchutil/vwd.py	[deleted file]	blob \| history
crunch_scripts/cwl-runner	[deleted file]	blob \| history
crunch_scripts/decompress-all.py	[deleted file]	blob \| history
crunch_scripts/file-select	[deleted file]	blob \| history
crunch_scripts/grep	[deleted file]	blob \| history
crunch_scripts/hash	[deleted file]	blob \| history
crunch_scripts/pgp-survey-import	[deleted file]	blob \| history
crunch_scripts/pgp-survey-parse	[deleted file]	blob \| history
crunch_scripts/picard-gatk2-prep	[deleted file]	blob \| history
crunch_scripts/pyrtg.py	[deleted file]	blob \| history
crunch_scripts/rtg-fasta2sdf	[deleted file]	blob \| history
crunch_scripts/rtg-fastq2sdf	[deleted file]	blob \| history
crunch_scripts/rtg-map	[deleted file]	blob \| history
crunch_scripts/rtg-snp	[deleted file]	blob \| history
crunch_scripts/run-command	[deleted file]	blob \| history
crunch_scripts/split-fastq.py	[deleted file]	blob \| history
crunch_scripts/test/task_output_dir	[deleted file]	blob \| history
services/api/app/controllers/arvados/v1/job_tasks_controller.rb		diff \| blob \| history
services/api/app/controllers/arvados/v1/jobs_controller.rb		diff \| blob \| history
services/api/app/controllers/arvados/v1/pipeline_instances_controller.rb		diff \| blob \| history
services/api/app/controllers/arvados/v1/pipeline_templates_controller.rb		diff \| blob \| history
services/api/lib/crunch_dispatch.rb	[deleted file]	blob \| history
services/api/script/crunch-dispatch.rb	[deleted file]	blob \| history
services/api/script/crunch_failure_report.py	[deleted file]	blob \| history
services/api/script/fail-jobs.rb	[deleted file]	blob \| history

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