Reorganized user manual into sections
authorPeter Amstutz <peter.amstutz@clinicalfuture.com>
Mon, 16 Dec 2013 16:24:52 +0000 (11:24 -0500)
committerPeter Amstutz <peter.amstutz@clinicalfuture.com>
Mon, 16 Dec 2013 16:24:52 +0000 (11:24 -0500)
commit2183113c4c357e07719251854e3d249cdcd394dd
tree0bedbe9f1d90e8db2f6d7ed19da6b57307b34d2b
parent9262dfeaba64d589cc8266cfc02b6a2b10278d48
Reorganized user manual into sections
19 files changed:
doc/_layouts/default.html
doc/user/examples/crunch-examples.textile [moved from doc/user/crunch-examples.textile with 99% similarity]
doc/user/examples/example-pipeline.textile [moved from doc/user/example-pipeline.textile with 99% similarity]
doc/user/getting_started/check-environment.textile [moved from doc/user/check-environment.textile with 100% similarity]
doc/user/getting_started/ssh-access.textile [moved from doc/user/ssh-access.textile with 100% similarity]
doc/user/getting_started/workbench.textile [moved from doc/user/workbench.textile with 100% similarity]
doc/user/reference/api-tokens.textile [moved from doc/user/api-tokens.textile with 97% similarity]
doc/user/reference/crunch-utility-libraries.textile [moved from doc/user/crunch-utility-libraries.textile with 99% similarity]
doc/user/reference/intro-jobs.textile [moved from doc/user/intro-jobs.textile with 99% similarity]
doc/user/reference/sdk-cli.textile [moved from doc/user/sdk-cli.textile with 97% similarity]
doc/user/tutorials/intro-keep.textile [moved from doc/user/intro-keep.textile with 98% similarity]
doc/user/tutorials/tutorial-firstscript.textile [moved from doc/user/tutorial-firstscript.textile with 98% similarity]
doc/user/tutorials/tutorial-gatk-variantfiltration.textile [moved from doc/user/tutorial-gatk-variantfiltration.textile with 98% similarity]
doc/user/tutorials/tutorial-job-debug.textile [moved from doc/user/tutorial-job-debug.textile with 99% similarity]
doc/user/tutorials/tutorial-job1.textile [moved from doc/user/tutorial-job1.textile with 99% similarity]
doc/user/tutorials/tutorial-keep.textile [moved from doc/user/tutorial-keep.textile with 97% similarity]
doc/user/tutorials/tutorial-new-pipeline.textile [moved from doc/user/tutorial-new-pipeline.textile with 99% similarity]
doc/user/tutorials/tutorial-parallel.textile [moved from doc/user/tutorial-parallel.textile with 98% similarity]
doc/user/tutorials/tutorial-trait-search.textile [moved from doc/user/tutorial-trait-search.textile with 99% similarity]