X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/fbcedc4041edae0c1ff5367915bb75d60d47a99f..47eb67e4c084abde49d5463d4ced8b4436a59dfd:/services/crunch-run/crunchrun_test.go diff --git a/services/crunch-run/crunchrun_test.go b/services/crunch-run/crunchrun_test.go index 4702838362..22989bb2ec 100644 --- a/services/crunch-run/crunchrun_test.go +++ b/services/crunch-run/crunchrun_test.go @@ -7,7 +7,6 @@ package main import ( "bufio" "bytes" - "context" "crypto/md5" "encoding/json" "errors" @@ -28,7 +27,9 @@ import ( "git.curoverse.com/arvados.git/sdk/go/arvados" "git.curoverse.com/arvados.git/sdk/go/arvadosclient" + "git.curoverse.com/arvados.git/sdk/go/arvadostest" "git.curoverse.com/arvados.git/sdk/go/manifest" + "golang.org/x/net/context" dockertypes "github.com/docker/docker/api/types" dockercontainer "github.com/docker/docker/api/types/container" @@ -41,11 +42,17 @@ func TestCrunchExec(t *testing.T) { TestingT(t) } -type TestSuite struct{} - // Gocheck boilerplate var _ = Suite(&TestSuite{}) +type TestSuite struct { + docker *TestDockerClient +} + +func (s *TestSuite) SetUpTest(c *C) { + s.docker = NewTestDockerClient() +} + type ArvTestClient struct { Total int64 Calls int @@ -87,18 +94,18 @@ type TestDockerClient struct { logReader io.ReadCloser logWriter io.WriteCloser fn func(t *TestDockerClient) - finish int + exitCode int stop chan bool cwd string env []string api *ArvTestClient realTemp string + calledWait bool } -func NewTestDockerClient(exitCode int) *TestDockerClient { +func NewTestDockerClient() *TestDockerClient { t := &TestDockerClient{} t.logReader, t.logWriter = io.Pipe() - t.finish = exitCode t.stop = make(chan bool, 1) t.cwd = "/" return t @@ -130,6 +137,19 @@ func (t *TestDockerClient) ContainerCreate(ctx context.Context, config *dockerco } func (t *TestDockerClient) ContainerStart(ctx context.Context, container string, options dockertypes.ContainerStartOptions) error { + if t.exitCode == 3 { + return errors.New(`Error response from daemon: oci runtime error: container_linux.go:247: starting container process caused "process_linux.go:359: container init caused \"rootfs_linux.go:54: mounting \\\"/tmp/keep453790790/by_id/99999999999999999999999999999999+99999/myGenome\\\" to rootfs \\\"/tmp/docker/overlay2/9999999999999999999999999999999999999999999999999999999999999999/merged\\\" at \\\"/tmp/docker/overlay2/9999999999999999999999999999999999999999999999999999999999999999/merged/keep/99999999999999999999999999999999+99999/myGenome\\\" caused \\\"no such file or directory\\\"\""`) + } + if t.exitCode == 4 { + return errors.New(`panic: standard_init_linux.go:175: exec user process caused "no such file or directory"`) + } + if t.exitCode == 5 { + return errors.New(`Error response from daemon: Cannot start container 41f26cbc43bcc1280f4323efb1830a394ba8660c9d1c2b564ba42bf7f7694845: [8] System error: no such file or directory`) + } + if t.exitCode == 6 { + return errors.New(`Error response from daemon: Cannot start container 58099cd76c834f3dc2a4fb76c8028f049ae6d4fdf0ec373e1f2cfea030670c2d: [8] System error: exec: "foobar": executable file not found in $PATH`) + } + if container == "abcde" { // t.fn gets executed in ContainerWait return nil @@ -138,25 +158,24 @@ func (t *TestDockerClient) ContainerStart(ctx context.Context, container string, } } -func (t *TestDockerClient) ContainerStop(ctx context.Context, container string, timeout *time.Duration) error { +func (t *TestDockerClient) ContainerRemove(ctx context.Context, container string, options dockertypes.ContainerRemoveOptions) error { t.stop <- true return nil } func (t *TestDockerClient) ContainerWait(ctx context.Context, container string, condition dockercontainer.WaitCondition) (<-chan dockercontainer.ContainerWaitOKBody, <-chan error) { - body := make(chan dockercontainer.ContainerWaitOKBody) + t.calledWait = true + body := make(chan dockercontainer.ContainerWaitOKBody, 1) err := make(chan error) go func() { t.fn(t) - body <- dockercontainer.ContainerWaitOKBody{StatusCode: int64(t.finish)} - close(body) - close(err) + body <- dockercontainer.ContainerWaitOKBody{StatusCode: int64(t.exitCode)} }() return body, err } func (t *TestDockerClient) ImageInspectWithRaw(ctx context.Context, image string) (dockertypes.ImageInspect, []byte, error) { - if t.finish == 2 { + if t.exitCode == 2 { return dockertypes.ImageInspect{}, nil, fmt.Errorf("Cannot connect to the Docker daemon at unix:///var/run/docker.sock. Is the docker daemon running?") } @@ -168,7 +187,7 @@ func (t *TestDockerClient) ImageInspectWithRaw(ctx context.Context, image string } func (t *TestDockerClient) ImageLoad(ctx context.Context, input io.Reader, quiet bool) (dockertypes.ImageLoadResponse, error) { - if t.finish == 2 { + if t.exitCode == 2 { return dockertypes.ImageLoadResponse{}, fmt.Errorf("Cannot connect to the Docker daemon at unix:///var/run/docker.sock. Is the docker daemon running?") } _, err := io.Copy(ioutil.Discard, input) @@ -230,8 +249,23 @@ func (client *ArvTestClient) Call(method, resourceType, uuid, action string, par func (client *ArvTestClient) CallRaw(method, resourceType, uuid, action string, parameters arvadosclient.Dict) (reader io.ReadCloser, err error) { var j []byte - if method == "GET" && resourceType == "containers" && action == "" && !client.callraw { - j, err = json.Marshal(client.Container) + if method == "GET" && resourceType == "nodes" && uuid == "" && action == "" { + j = []byte(`{ + "kind": "arvados#nodeList", + "items": [{ + "uuid": "zzzzz-7ekkf-2z3mc76g2q73aio", + "hostname": "compute2", + "properties": {"total_cpu_cores": 16} + }]}`) + } else if method == "GET" && resourceType == "containers" && action == "" && !client.callraw { + if uuid == "" { + j, err = json.Marshal(map[string]interface{}{ + "items": []interface{}{client.Container}, + "kind": "arvados#nodeList", + }) + } else { + j, err = json.Marshal(client.Container) + } } else { j = []byte(`{ "command": ["sleep", "1"], @@ -328,11 +362,27 @@ type FileWrapper struct { len int64 } +func (fw FileWrapper) Readdir(n int) ([]os.FileInfo, error) { + return nil, errors.New("not implemented") +} + +func (fw FileWrapper) Seek(int64, int) (int64, error) { + return 0, errors.New("not implemented") +} + func (fw FileWrapper) Size() int64 { return fw.len } -func (fw FileWrapper) Seek(int64, int) (int64, error) { +func (fw FileWrapper) Stat() (os.FileInfo, error) { + return nil, errors.New("not implemented") +} + +func (fw FileWrapper) Truncate(int64) error { + return errors.New("not implemented") +} + +func (fw FileWrapper) Write([]byte) (int, error) { return 0, errors.New("not implemented") } @@ -351,8 +401,7 @@ func (client *KeepTestClient) ManifestFileReader(m manifest.Manifest, filename s func (s *TestSuite) TestLoadImage(c *C) { kc := &KeepTestClient{} - docker := NewTestDockerClient(0) - cr := NewContainerRunner(&ArvTestClient{}, kc, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr := NewContainerRunner(&ArvTestClient{}, kc, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") _, err := cr.Docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) @@ -440,20 +489,14 @@ func (KeepReadErrorTestClient) PutHB(hash string, buf []byte) (string, int, erro func (KeepReadErrorTestClient) ClearBlockCache() { } -type ErrorReader struct{} +type ErrorReader struct { + FileWrapper +} func (ErrorReader) Read(p []byte) (n int, err error) { return 0, errors.New("ErrorReader") } -func (ErrorReader) Close() error { - return nil -} - -func (ErrorReader) Size() int64 { - return 0 -} - func (ErrorReader) Seek(int64, int) (int64, error) { return 0, errors.New("ErrorReader") } @@ -473,8 +516,7 @@ func (s *TestSuite) TestLoadImageArvError(c *C) { func (s *TestSuite) TestLoadImageKeepError(c *C) { // (2) Keep error - docker := NewTestDockerClient(0) - cr := NewContainerRunner(&ArvTestClient{}, KeepErrorTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr := NewContainerRunner(&ArvTestClient{}, KeepErrorTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") cr.Container.ContainerImage = hwPDH err := cr.LoadImage() @@ -492,8 +534,7 @@ func (s *TestSuite) TestLoadImageCollectionError(c *C) { func (s *TestSuite) TestLoadImageKeepReadError(c *C) { // (4) Collection doesn't contain image - docker := NewTestDockerClient(0) - cr := NewContainerRunner(&ArvTestClient{}, KeepReadErrorTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr := NewContainerRunner(&ArvTestClient{}, KeepReadErrorTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") cr.Container.ContainerImage = hwPDH err := cr.LoadImage() @@ -533,12 +574,11 @@ func dockerLog(fd byte, msg string) []byte { } func (s *TestSuite) TestRunContainer(c *C) { - docker := NewTestDockerClient(0) - docker.fn = func(t *TestDockerClient) { + s.docker.fn = func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, "Hello world\n")) t.logWriter.Close() } - cr := NewContainerRunner(&ArvTestClient{}, &KeepTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr := NewContainerRunner(&ArvTestClient{}, &KeepTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") var logs TestLogs cr.NewLogWriter = logs.NewTestLoggingWriter @@ -628,18 +668,18 @@ func (s *TestSuite) TestUpdateContainerCancelled(c *C) { // Used by the TestFullRun*() test below to DRY up boilerplate setup to do full // dress rehearsal of the Run() function, starting from a JSON container record. -func FullRunHelper(c *C, record string, extraMounts []string, exitCode int, fn func(t *TestDockerClient)) (api *ArvTestClient, cr *ContainerRunner, realTemp string) { +func (s *TestSuite) fullRunHelper(c *C, record string, extraMounts []string, exitCode int, fn func(t *TestDockerClient)) (api *ArvTestClient, cr *ContainerRunner, realTemp string) { rec := arvados.Container{} err := json.Unmarshal([]byte(record), &rec) c.Check(err, IsNil) - docker := NewTestDockerClient(exitCode) - docker.fn = fn - docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) + s.docker.exitCode = exitCode + s.docker.fn = fn + s.docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) api = &ArvTestClient{Container: rec} - docker.api = api - cr = NewContainerRunner(api, &KeepTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + s.docker.api = api + cr = NewContainerRunner(api, &KeepTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") cr.statInterval = 100 * time.Millisecond am := &ArvMountCmdLine{} cr.RunArvMount = am.ArvMountTest @@ -648,7 +688,7 @@ func FullRunHelper(c *C, record string, extraMounts []string, exitCode int, fn f c.Assert(err, IsNil) defer os.RemoveAll(realTemp) - docker.realTemp = realTemp + s.docker.realTemp = realTemp tempcount := 0 cr.MkTempDir = func(_ string, prefix string) (string, error) { @@ -691,7 +731,7 @@ func FullRunHelper(c *C, record string, extraMounts []string, exitCode int, fn f } func (s *TestSuite) TestFullRunHello(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["echo", "hello world"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -712,7 +752,7 @@ func (s *TestSuite) TestFullRunHello(c *C) { } func (s *TestSuite) TestCrunchstat(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["sleep", "1"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -744,7 +784,8 @@ func (s *TestSuite) TestCrunchstat(c *C) { } func (s *TestSuite) TestNodeInfoLog(c *C) { - api, _, _ := FullRunHelper(c, `{ + os.Setenv("SLURMD_NODENAME", "compute2") + api, _, _ := s.fullRunHelper(c, `{ "command": ["sleep", "1"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -762,16 +803,23 @@ func (s *TestSuite) TestNodeInfoLog(c *C) { c.Check(api.CalledWith("container.exit_code", 0), NotNil) c.Check(api.CalledWith("container.state", "Complete"), NotNil) + c.Assert(api.Logs["node"], NotNil) + json := api.Logs["node"].String() + c.Check(json, Matches, `(?ms).*"uuid": *"zzzzz-7ekkf-2z3mc76g2q73aio".*`) + c.Check(json, Matches, `(?ms).*"total_cpu_cores": *16.*`) + c.Check(json, Not(Matches), `(?ms).*"info":.*`) + c.Assert(api.Logs["node-info"], NotNil) - c.Check(api.Logs["node-info"].String(), Matches, `(?ms).*Host Information.*`) - c.Check(api.Logs["node-info"].String(), Matches, `(?ms).*CPU Information.*`) - c.Check(api.Logs["node-info"].String(), Matches, `(?ms).*Memory Information.*`) - c.Check(api.Logs["node-info"].String(), Matches, `(?ms).*Disk Space.*`) - c.Check(api.Logs["node-info"].String(), Matches, `(?ms).*Disk INodes.*`) + json = api.Logs["node-info"].String() + c.Check(json, Matches, `(?ms).*Host Information.*`) + c.Check(json, Matches, `(?ms).*CPU Information.*`) + c.Check(json, Matches, `(?ms).*Memory Information.*`) + c.Check(json, Matches, `(?ms).*Disk Space.*`) + c.Check(json, Matches, `(?ms).*Disk INodes.*`) } func (s *TestSuite) TestContainerRecordLog(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["sleep", "1"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -794,7 +842,7 @@ func (s *TestSuite) TestContainerRecordLog(c *C) { } func (s *TestSuite) TestFullRunStderr(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["/bin/sh", "-c", "echo hello ; echo world 1>&2 ; exit 1"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -819,7 +867,7 @@ func (s *TestSuite) TestFullRunStderr(c *C) { } func (s *TestSuite) TestFullRunDefaultCwd(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["pwd"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -840,7 +888,7 @@ func (s *TestSuite) TestFullRunDefaultCwd(c *C) { } func (s *TestSuite) TestFullRunSetCwd(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["pwd"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": "/bin", @@ -862,7 +910,7 @@ func (s *TestSuite) TestFullRunSetCwd(c *C) { func (s *TestSuite) TestStopOnSignal(c *C) { s.testStopContainer(c, func(cr *ContainerRunner) { go func() { - for !cr.cStarted { + for !s.docker.calledWait { time.Sleep(time.Millisecond) } cr.SigChan <- syscall.SIGINT @@ -896,16 +944,15 @@ func (s *TestSuite) testStopContainer(c *C, setup func(cr *ContainerRunner)) { err := json.Unmarshal([]byte(record), &rec) c.Check(err, IsNil) - docker := NewTestDockerClient(0) - docker.fn = func(t *TestDockerClient) { + s.docker.fn = func(t *TestDockerClient) { <-t.stop t.logWriter.Write(dockerLog(1, "foo\n")) t.logWriter.Close() } - docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) + s.docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) api := &ArvTestClient{Container: rec} - cr := NewContainerRunner(api, &KeepTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr := NewContainerRunner(api, &KeepTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") cr.RunArvMount = func([]string, string) (*exec.Cmd, error) { return nil, nil } setup(cr) @@ -927,11 +974,11 @@ func (s *TestSuite) testStopContainer(c *C, setup func(cr *ContainerRunner)) { c.Check(api.CalledWith("container.log", nil), NotNil) c.Check(api.CalledWith("container.state", "Cancelled"), NotNil) - c.Check(strings.HasSuffix(api.Logs["stdout"].String(), "foo\n"), Equals, true) + c.Check(api.Logs["stdout"].String(), Matches, "(?ms).*foo\n$") } func (s *TestSuite) TestFullRunSetEnv(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["/bin/sh", "-c", "echo $FROBIZ"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": "/bin", @@ -1240,6 +1287,64 @@ func (s *TestSuite) TestSetupMounts(c *C) { cr.CleanupDirs() checkEmpty() } + + // git_tree mounts + { + i = 0 + cr.ArvMountPoint = "" + (*GitMountSuite)(nil).useTestGitServer(c) + cr.token = arvadostest.ActiveToken + cr.Container.Mounts = make(map[string]arvados.Mount) + cr.Container.Mounts = map[string]arvados.Mount{ + "/tip": { + Kind: "git_tree", + UUID: arvadostest.Repository2UUID, + Commit: "fd3531f42995344f36c30b79f55f27b502f3d344", + Path: "/", + }, + "/non-tip": { + Kind: "git_tree", + UUID: arvadostest.Repository2UUID, + Commit: "5ebfab0522851df01fec11ec55a6d0f4877b542e", + Path: "/", + }, + } + cr.OutputPath = "/tmp" + + err := cr.SetupMounts() + c.Check(err, IsNil) + + // dirMap[mountpoint] == tmpdir + dirMap := make(map[string]string) + for _, bind := range cr.Binds { + tokens := strings.Split(bind, ":") + dirMap[tokens[1]] = tokens[0] + + if cr.Container.Mounts[tokens[1]].Writable { + c.Check(len(tokens), Equals, 2) + } else { + c.Check(len(tokens), Equals, 3) + c.Check(tokens[2], Equals, "ro") + } + } + + data, err := ioutil.ReadFile(dirMap["/tip"] + "/dir1/dir2/file with mode 0644") + c.Check(err, IsNil) + c.Check(string(data), Equals, "\000\001\002\003") + _, err = ioutil.ReadFile(dirMap["/tip"] + "/file only on testbranch") + c.Check(err, FitsTypeOf, &os.PathError{}) + c.Check(os.IsNotExist(err), Equals, true) + + data, err = ioutil.ReadFile(dirMap["/non-tip"] + "/dir1/dir2/file with mode 0644") + c.Check(err, IsNil) + c.Check(string(data), Equals, "\000\001\002\003") + data, err = ioutil.ReadFile(dirMap["/non-tip"] + "/file only on testbranch") + c.Check(err, IsNil) + c.Check(string(data), Equals, "testfile\n") + + cr.CleanupDirs() + checkEmpty() + } } func (s *TestSuite) TestStdout(c *C) { @@ -1254,7 +1359,7 @@ func (s *TestSuite) TestStdout(c *C) { "runtime_constraints": {} }` - api, _, _ := FullRunHelper(c, helperRecord, nil, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, nil, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1265,17 +1370,16 @@ func (s *TestSuite) TestStdout(c *C) { } // Used by the TestStdoutWithWrongPath*() -func StdoutErrorRunHelper(c *C, record string, fn func(t *TestDockerClient)) (api *ArvTestClient, cr *ContainerRunner, err error) { +func (s *TestSuite) stdoutErrorRunHelper(c *C, record string, fn func(t *TestDockerClient)) (api *ArvTestClient, cr *ContainerRunner, err error) { rec := arvados.Container{} err = json.Unmarshal([]byte(record), &rec) c.Check(err, IsNil) - docker := NewTestDockerClient(0) - docker.fn = fn - docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) + s.docker.fn = fn + s.docker.ImageRemove(nil, hwImageId, dockertypes.ImageRemoveOptions{}) api = &ArvTestClient{Container: rec} - cr = NewContainerRunner(api, &KeepTestClient{}, docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") + cr = NewContainerRunner(api, &KeepTestClient{}, s.docker, "zzzzz-zzzzz-zzzzzzzzzzzzzzz") am := &ArvMountCmdLine{} cr.RunArvMount = am.ArvMountTest @@ -1284,7 +1388,7 @@ func StdoutErrorRunHelper(c *C, record string, fn func(t *TestDockerClient)) (ap } func (s *TestSuite) TestStdoutWithWrongPath(c *C) { - _, _, err := StdoutErrorRunHelper(c, `{ + _, _, err := s.stdoutErrorRunHelper(c, `{ "mounts": {"/tmp": {"kind": "tmp"}, "stdout": {"kind": "file", "path":"/tmpa.out"} }, "output_path": "/tmp" }`, func(t *TestDockerClient) {}) @@ -1294,7 +1398,7 @@ func (s *TestSuite) TestStdoutWithWrongPath(c *C) { } func (s *TestSuite) TestStdoutWithWrongKindTmp(c *C) { - _, _, err := StdoutErrorRunHelper(c, `{ + _, _, err := s.stdoutErrorRunHelper(c, `{ "mounts": {"/tmp": {"kind": "tmp"}, "stdout": {"kind": "tmp", "path":"/tmp/a.out"} }, "output_path": "/tmp" }`, func(t *TestDockerClient) {}) @@ -1304,7 +1408,7 @@ func (s *TestSuite) TestStdoutWithWrongKindTmp(c *C) { } func (s *TestSuite) TestStdoutWithWrongKindCollection(c *C) { - _, _, err := StdoutErrorRunHelper(c, `{ + _, _, err := s.stdoutErrorRunHelper(c, `{ "mounts": {"/tmp": {"kind": "tmp"}, "stdout": {"kind": "collection", "path":"/tmp/a.out"} }, "output_path": "/tmp" }`, func(t *TestDockerClient) {}) @@ -1316,7 +1420,7 @@ func (s *TestSuite) TestStdoutWithWrongKindCollection(c *C) { func (s *TestSuite) TestFullRunWithAPI(c *C) { os.Setenv("ARVADOS_API_HOST", "test.arvados.org") defer os.Unsetenv("ARVADOS_API_HOST") - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["/bin/sh", "-c", "echo $ARVADOS_API_HOST"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": "/bin", @@ -1339,7 +1443,7 @@ func (s *TestSuite) TestFullRunWithAPI(c *C) { func (s *TestSuite) TestFullRunSetOutput(c *C) { os.Setenv("ARVADOS_API_HOST", "test.arvados.org") defer os.Unsetenv("ARVADOS_API_HOST") - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["/bin/sh", "-c", "echo $ARVADOS_API_HOST"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": "/bin", @@ -1379,7 +1483,7 @@ func (s *TestSuite) TestStdoutWithExcludeFromOutputMountPointUnderOutputDir(c *C extraMounts := []string{"a3e8f74c6f101eae01fa08bfb4e49b3a+54"} - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1414,7 +1518,7 @@ func (s *TestSuite) TestStdoutWithMultipleMountPointsUnderOutputDir(c *C) { "a0def87f80dd594d4675809e83bd4f15+367/subdir1/subdir2/file2_in_subdir2.txt", } - api, runner, realtemp := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, runner, realtemp := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1466,7 +1570,7 @@ func (s *TestSuite) TestStdoutWithMountPointsUnderOutputDirDenormalizedManifest( "b0def87f80dd594d4675809e83bd4f15+367/subdir1/file2_in_subdir1.txt", } - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1507,7 +1611,7 @@ func (s *TestSuite) TestOutputSymlinkToInput(c *C) { "a0def87f80dd594d4675809e83bd4f15+367/subdir1/file2_in_subdir1.txt", } - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { os.Symlink("/keep/foo/sub1file2", t.realTemp+"/2/baz") os.Symlink("/keep/foo2/subdir1/file2_in_subdir1.txt", t.realTemp+"/2/baz2") os.Symlink("/keep/foo2/subdir1", t.realTemp+"/2/baz3") @@ -1549,7 +1653,7 @@ func (s *TestSuite) TestOutputError(c *C) { extraMounts := []string{} - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { os.Symlink("/etc/hosts", t.realTemp+"/2/baz") t.logWriter.Close() }) @@ -1573,7 +1677,7 @@ func (s *TestSuite) TestOutputSymlinkToOutput(c *C) { extraMounts := []string{} - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { rf, _ := os.Create(t.realTemp + "/2/realfile") rf.Write([]byte("foo")) rf.Close() @@ -1630,7 +1734,7 @@ func (s *TestSuite) TestStdinCollectionMountPoint(c *C) { "b0def87f80dd594d4675809e83bd4f15+367/file1_in_main.txt", } - api, _, _ := FullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, extraMounts, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1665,7 +1769,7 @@ func (s *TestSuite) TestStdinJsonMountPoint(c *C) { "runtime_constraints": {} }` - api, _, _ := FullRunHelper(c, helperRecord, nil, 0, func(t *TestDockerClient) { + api, _, _ := s.fullRunHelper(c, helperRecord, nil, 0, func(t *TestDockerClient) { t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n")) t.logWriter.Close() }) @@ -1685,7 +1789,7 @@ func (s *TestSuite) TestStdinJsonMountPoint(c *C) { } func (s *TestSuite) TestStderrMount(c *C) { - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["/bin/sh", "-c", "echo hello;exit 1"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -1782,7 +1886,7 @@ exec echo killme ech := tf.Name() brokenNodeHook = &ech - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["echo", "hello world"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -1807,7 +1911,7 @@ func (s *TestSuite) TestFullBrokenDocker2(c *C) { ech := "" brokenNodeHook = &ech - api, _, _ := FullRunHelper(c, `{ + api, _, _ := s.fullRunHelper(c, `{ "command": ["echo", "hello world"], "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", "cwd": ".", @@ -1825,3 +1929,91 @@ func (s *TestSuite) TestFullBrokenDocker2(c *C) { c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*unable to run containers.*") c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*No broken node hook.*") } + +func (s *TestSuite) TestFullBrokenDocker3(c *C) { + ech := "" + brokenNodeHook = &ech + + api, _, _ := s.fullRunHelper(c, `{ + "command": ["echo", "hello world"], + "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", + "cwd": ".", + "environment": {}, + "mounts": {"/tmp": {"kind": "tmp"} }, + "output_path": "/tmp", + "priority": 1, + "runtime_constraints": {} +}`, nil, 3, func(t *TestDockerClient) { + t.logWriter.Write(dockerLog(1, "hello world\n")) + t.logWriter.Close() + }) + + c.Check(api.CalledWith("container.state", "Cancelled"), NotNil) + c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*unable to run containers.*") +} + +func (s *TestSuite) TestBadCommand1(c *C) { + ech := "" + brokenNodeHook = &ech + + api, _, _ := s.fullRunHelper(c, `{ + "command": ["echo", "hello world"], + "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", + "cwd": ".", + "environment": {}, + "mounts": {"/tmp": {"kind": "tmp"} }, + "output_path": "/tmp", + "priority": 1, + "runtime_constraints": {} +}`, nil, 4, func(t *TestDockerClient) { + t.logWriter.Write(dockerLog(1, "hello world\n")) + t.logWriter.Close() + }) + + c.Check(api.CalledWith("container.state", "Cancelled"), NotNil) + c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*Possible causes:.*is missing.*") +} + +func (s *TestSuite) TestBadCommand2(c *C) { + ech := "" + brokenNodeHook = &ech + + api, _, _ := s.fullRunHelper(c, `{ + "command": ["echo", "hello world"], + "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", + "cwd": ".", + "environment": {}, + "mounts": {"/tmp": {"kind": "tmp"} }, + "output_path": "/tmp", + "priority": 1, + "runtime_constraints": {} +}`, nil, 5, func(t *TestDockerClient) { + t.logWriter.Write(dockerLog(1, "hello world\n")) + t.logWriter.Close() + }) + + c.Check(api.CalledWith("container.state", "Cancelled"), NotNil) + c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*Possible causes:.*is missing.*") +} + +func (s *TestSuite) TestBadCommand3(c *C) { + ech := "" + brokenNodeHook = &ech + + api, _, _ := s.fullRunHelper(c, `{ + "command": ["echo", "hello world"], + "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122", + "cwd": ".", + "environment": {}, + "mounts": {"/tmp": {"kind": "tmp"} }, + "output_path": "/tmp", + "priority": 1, + "runtime_constraints": {} +}`, nil, 6, func(t *TestDockerClient) { + t.logWriter.Write(dockerLog(1, "hello world\n")) + t.logWriter.Close() + }) + + c.Check(api.CalledWith("container.state", "Cancelled"), NotNil) + c.Check(api.Logs["crunch-run"].String(), Matches, "(?ms).*Possible causes:.*is missing.*") +}