X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/f190422ae9778231d2a96649f0edb2ff4739b86a..7459798ee457e26a4d8e7110f87b378dd292856f:/src/index.tsx

diff --git a/src/index.tsx b/src/index.tsx
index 20d2c1e9e1..a4a5e366a2 100644
--- a/src/index.tsx
+++ b/src/index.tsx
@@ -5,7 +5,7 @@
 import * as React from 'react';
 import * as ReactDOM from 'react-dom';
 import { Provider } from "react-redux";
-import { Workbench } from './views/workbench/workbench';
+import { MainPanel } from './views/main-panel/main-panel';
 import './index.css';
 import { Route } from 'react-router';
 import createBrowserHistory from "history/createBrowserHistory";
@@ -18,7 +18,7 @@ import { createServices } from "./services/services";
 import { MuiThemeProvider } from '@material-ui/core/styles';
 import { CustomTheme } from './common/custom-theme';
 import { fetchConfig } from './common/config';
-import { addMenuActionSet, ContextMenuKind } from "./views-components/context-menu/context-menu";
+import { addMenuActionSet, ContextMenuKind } from './views-components/context-menu/context-menu';
 import { rootProjectActionSet } from "./views-components/context-menu/action-sets/root-project-action-set";
 import { projectActionSet } from "./views-components/context-menu/action-sets/project-action-set";
 import { resourceActionSet } from './views-components/context-menu/action-sets/resource-action-set';
@@ -28,12 +28,20 @@ import { collectionFilesItemActionSet } from './views-components/context-menu/ac
 import { collectionActionSet } from './views-components/context-menu/action-sets/collection-action-set';
 import { collectionResourceActionSet } from './views-components/context-menu/action-sets/collection-resource-action-set';
 import { processActionSet } from './views-components/context-menu/action-sets/process-action-set';
-import { addRouteChangeHandlers } from './routes/routes';
 import { loadWorkbench } from './store/workbench/workbench-actions';
 import { Routes } from '~/routes/routes';
+import { trashActionSet } from "~/views-components/context-menu/action-sets/trash-action-set";
 import { ServiceRepository } from '~/services/services';
 import { initWebSocket } from '~/websocket/websocket';
 import { Config } from '~/common/config';
+import { addRouteChangeHandlers } from './routes/route-change-handlers';
+import { setCurrentTokenDialogApiHost } from '~/store/current-token-dialog/current-token-dialog-actions';
+import { processResourceActionSet } from '~/views-components/context-menu/action-sets/process-resource-action-set';
+import { progressIndicatorActions } from '~/store/progress-indicator/progress-indicator-actions';
+import { setUuidPrefix } from '~/store/workflow-panel/workflow-panel-actions';
+import { trashedCollectionActionSet } from '~/views-components/context-menu/action-sets/trashed-collection-action-set';
+import { ContainerRequestState } from '~/models/container-request';
+import { MountKind } from './models/mount-types';
 
 const getBuildNumber = () => "BN-" + (process.env.REACT_APP_BUILD_NUMBER || "dev");
 const getGitCommit = () => "GIT-" + (process.env.REACT_APP_GIT_COMMIT || "latest").substr(0, 7);
@@ -51,19 +59,32 @@ addMenuActionSet(ContextMenuKind.COLLECTION_FILES, collectionFilesActionSet);
 addMenuActionSet(ContextMenuKind.COLLECTION_FILES_ITEM, collectionFilesItemActionSet);
 addMenuActionSet(ContextMenuKind.COLLECTION, collectionActionSet);
 addMenuActionSet(ContextMenuKind.COLLECTION_RESOURCE, collectionResourceActionSet);
+addMenuActionSet(ContextMenuKind.TRASHED_COLLECTION, trashedCollectionActionSet);
 addMenuActionSet(ContextMenuKind.PROCESS, processActionSet);
+addMenuActionSet(ContextMenuKind.PROCESS_RESOURCE, processResourceActionSet);
+addMenuActionSet(ContextMenuKind.TRASH, trashActionSet);
 
 fetchConfig()
-    .then((config) => {
+    .then(({ config, apiHost }) => {
         const history = createBrowserHistory();
-        const services = createServices(config);
+        const services = createServices(config, {
+            progressFn: (id, working) => {
+                store.dispatch(progressIndicatorActions.TOGGLE_WORKING({ id, working }));
+            },
+            errorFn: (id, error) => {
+                // console.error("Backend error:", error);
+                // store.dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Backend error", kind: SnackbarKind.ERROR }));
+            }
+        });
         const store = configureStore(history, services);
 
         store.subscribe(initListener(history, store, services, config));
         store.dispatch(initAuth());
+        store.dispatch(setCurrentTokenDialogApiHost(apiHost));
+        store.dispatch(setUuidPrefix(config.uuidPrefix));
 
         const TokenComponent = (props: any) => <ApiToken authService={services.authService} {...props} />;
-        const WorkbenchComponent = (props: any) => <Workbench authService={services.authService} buildInfo={buildInfo} {...props} />;
+        const MainPanelComponent = (props: any) => <MainPanel buildInfo={buildInfo} {...props} />;
 
         const App = () =>
             <MuiThemeProvider theme={CustomTheme}>
@@ -71,7 +92,7 @@ fetchConfig()
                     <ConnectedRouter history={history}>
                         <div>
                             <Route path={Routes.TOKEN} component={TokenComponent} />
-                            <Route path={Routes.ROOT} component={WorkbenchComponent} />
+                            <Route path={Routes.ROOT} component={MainPanelComponent} />
                         </div>
                     </ConnectedRouter>
                 </Provider>
@@ -81,8 +102,6 @@ fetchConfig()
             <App />,
             document.getElementById('root') as HTMLElement
         );
-
-
     });
 
 const initListener = (history: History, store: RootStore, services: ServiceRepository, config: Config) => {
@@ -94,8 +113,145 @@ const initListener = (history: History, store: RootStore, services: ServiceRepos
             initWebSocket(config, services.authService, store);
             await store.dispatch(loadWorkbench());
             addRouteChangeHandlers(history, store);
+            // createEnumCollectorWorkflow(services);
         }
     };
 };
 
+const createPrimitivesCollectorWorkflow = ({workflowService}:ServiceRepository) => {
+    workflowService.create({
+            name: 'Primitive values collector',
+            description: 'Workflow for collecting primitive values',
+            definition: "cwlVersion: v1.0\n$graph:\n- class: CommandLineTool\n  requirements:\n  - listing:\n    - entryname: input_collector.log\n      entry: |\n        \"flag\":\n          $(inputs.example_flag)\n        \"string\":\n          $(inputs.example_string)\n        \"int\":\n          $(inputs.example_int)\n        \"long\":\n          $(inputs.example_long)\n        \"float\":\n          $(inputs.example_float)\n        \"double\":\n          $(inputs.example_double)\n    class: InitialWorkDirRequirement\n  inputs:\n  - type: double\n    id: '#input_collector.cwl/example_double'\n  - type: boolean\n    id: '#input_collector.cwl/example_flag'\n  - type: float\n    id: '#input_collector.cwl/example_float'\n  - type: int\n    id: '#input_collector.cwl/example_int'\n  - type: long\n    id: '#input_collector.cwl/example_long'\n  - type: string\n    id: '#input_collector.cwl/example_string'\n  outputs:\n  - type: File\n    outputBinding:\n      glob: '*'\n    id: '#input_collector.cwl/output'\n  baseCommand: [echo]\n  id: '#input_collector.cwl'\n- class: Workflow\n  doc: Workflw for collecting primitive values\n  inputs:\n  - type: double\n    label: Double value\n    doc: This should allow for entering a decimal number (64-bit).\n    id: '#main/example_double'\n    default: 0.3333333333333333\n  - type: boolean\n    label: Boolean Flag\n    doc: This should render as in checkbox.\n    id: '#main/example_flag'\n    default: true\n  - type: float\n    label: Float value\n    doc: This should allow for entering a decimal number (32-bit).\n    id: '#main/example_float'\n    default: 0.15625\n  - type: int\n    label: Integer Number\n    doc: This should allow for entering a number (32-bit signed).\n    id: '#main/example_int'\n    default: 2147483647\n  - type: long\n    label: Long Number\n    doc: This should allow for entering a number (64-bit signed).\n    id: '#main/example_long'\n    default: 9223372036854775807\n  - type: string\n    label: Freetext\n    doc: This should allow for entering an arbitrary char sequence.\n    id: '#main/example_string'\n    default: This is a string\n  outputs:\n  - type: File\n    outputSource: '#main/input_collector/output'\n    id: '#main/log_file'\n  steps:\n  - run: '#input_collector.cwl'\n    in:\n    - source: '#main/example_double'\n      id: '#main/input_collector/example_double'\n    - source: '#main/example_flag'\n      id: '#main/input_collector/example_flag'\n    - source: '#main/example_float'\n      id: '#main/input_collector/example_float'\n    - source: '#main/example_int'\n      id: '#main/input_collector/example_int'\n    - source: '#main/example_long'\n      id: '#main/input_collector/example_long'\n    - source: '#main/example_string'\n      id: '#main/input_collector/example_string'\n    out: ['#main/input_collector/output']\n    id: '#main/input_collector'\n  id: '#main'\n",
+        });
+};
+
+const createEnumCollectorWorkflow = ({workflowService}:ServiceRepository) => {
+    workflowService.create({
+            name: 'Enum values collector',
+            description: 'Workflow for collecting enum values',
+            definition: "cwlVersion: v1.0\n$graph:\n- class: CommandLineTool\n  requirements:\n  - listing:\n    - entryname: input_collector.log\n      entry: |\n        \"enum_type\":\n          $(inputs.enum_type)\n\n    class: InitialWorkDirRequirement\n  inputs:\n  - type:\n      type: enum\n      symbols: ['#input_collector.cwl/enum_type/OTU table', '#input_collector.cwl/enum_type/Pathway\n          table', '#input_collector.cwl/enum_type/Function table', '#input_collector.cwl/enum_type/Ortholog\n          table']\n    id: '#input_collector.cwl/enum_type'\n  outputs:\n  - type: File\n    outputBinding:\n      glob: '*'\n    id: '#input_collector.cwl/output'\n  baseCommand: [echo]\n  id: '#input_collector.cwl'\n- class: Workflow\n  doc: This is the description of the workflow\n  inputs:\n  - type:\n      type: enum\n      symbols: ['#main/enum_type/OTU table', '#main/enum_type/Pathway table', '#main/enum_type/Function\n          table', '#main/enum_type/Ortholog table']\n      name: '#enum_typef4179c7f-45f9-482d-a5db-1abb86698384'\n    label: Enumeration Type\n    doc: This should render as a drop-down menu.\n    id: '#main/enum_type'\n    default: OTU table\n  outputs:\n  - type: File\n    outputSource: '#main/input_collector/output'\n    id: '#main/log_file'\n  steps:\n  - run: '#input_collector.cwl'\n    in:\n    - source: '#main/enum_type'\n      id: '#main/input_collector/enum_type'\n    out: ['#main/input_collector/output']\n    id: '#main/input_collector'\n  id: '#main'\n",
+        });
+};
+
+const createSampleProcess = ({ containerRequestService }: ServiceRepository) => {
+    containerRequestService.create({
+        ownerUuid: 'c97qk-j7d0g-s3ngc1z0748hsmf',
+        name: 'Simple process 7',
+        state: ContainerRequestState.COMMITTED,
+        mounts: {
+            '/var/spool/cwl': {
+                kind: MountKind.COLLECTION,
+                writable: true,
+            },
+            'stdout': {
+                kind: MountKind.MOUNTED_FILE,
+                path: '/var/spool/cwl/cwl.output.json'
+            },
+            '/var/lib/cwl/workflow.json': {
+                kind: MountKind.JSON,
+                content: {
+                    "cwlVersion": "v1.0",
+                    "$graph": [
+                        {
+                            "class": "CommandLineTool",
+                            "requirements": [
+                                {
+                                  "listing": [
+                                    {
+                                      "entryname": "input_collector.log",
+                                      "entry": "$(inputs.single_file.basename)\n"
+                                    }
+                                  ],
+                                  "class": "InitialWorkDirRequirement"
+                                }
+                              ],
+                            "inputs": [
+                                {
+                                    "type": "File",
+                                    "id": "#input_collector.cwl/single_file"
+                                }
+                            ],
+                            "outputs": [
+                                {
+                                    "type": "File",
+                                    "outputBinding": {
+                                        "glob": "*"
+                                    },
+                                    "id": "#input_collector.cwl/output"
+                                }
+                            ],
+                            "baseCommand": [
+                                "echo"
+                            ],
+                            "id": "#input_collector.cwl"
+                        },
+                        {
+                            "class": "Workflow",
+                            "doc": "This is the description of the workflow",
+                            "inputs": [
+                                {
+                                    "type": "File",
+                                    "label": "Single File",
+                                    "doc": "This should allow for single File selection only.",
+                                    "id": "#main/single_file"
+                                }
+                            ],
+                            "outputs": [
+                                {
+                                    "type": "File",
+                                    "outputSource": "#main/input_collector/output",
+                                    "id": "#main/log_file"
+                                }
+                            ],
+                            "steps": [
+                                {
+                                    "run": "#input_collector.cwl",
+                                    "in": [
+                                        {
+                                            "source": "#main/single_file",
+                                            "id": "#main/input_collector/single_file"
+                                        }
+                                    ],
+                                    "out": [
+                                        "#main/input_collector/output"
+                                    ],
+                                    "id": "#main/input_collector"
+                                }
+                            ],
+                            "id": "#main"
+                        }
+                    ]
+                },
+            },
+            '/var/lib/cwl/cwl.input.json': {
+                kind: MountKind.JSON,
+                content: {
+                    "single_file": {
+                        "class": "File",
+                        "location": "keep:233454526794c0a2d56a305baeff3d30+145/1.txt",
+                        "basename": "fileA"
+                      }
+                },
+            }
+        },
+        runtimeConstraints: {
+            API: true,
+            vcpus: 1,
+            ram: 1073741824,
+        },
+        containerImage: 'arvados/jobs:1.1.4.20180618144723',
+        cwd: '/var/spool/cwl',
+        command: [
+            'arvados-cwl-runner',
+            '--local',
+            '--api=containers',
+            "--project-uuid=c97qk-j7d0g-s3ngc1z0748hsmf",
+            '/var/lib/cwl/workflow.json#main',
+            '/var/lib/cwl/cwl.input.json'
+        ],
+        outputPath: '/var/spool/cwl',
+        priority: 1,
+    });
+};
 
