X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/eae48c31bb338689ec67fbc6a14a2e0b1fb5e3b6..21598295f38998d8028aaa117f192de6b5758808:/apps/workbench/app/controllers/work_units_controller.rb diff --git a/apps/workbench/app/controllers/work_units_controller.rb b/apps/workbench/app/controllers/work_units_controller.rb index 3b611aa25b..550bdb7e95 100644 --- a/apps/workbench/app/controllers/work_units_controller.rb +++ b/apps/workbench/app/controllers/work_units_controller.rb @@ -57,7 +57,7 @@ class WorkUnitsController < ApplicationController workflow = Workflow.find? template_uuid if workflow.definition begin - wf_json = YAML::load(workflow.definition) + wf_json = ActiveSupport::HashWithIndifferentAccess.new YAML::load(workflow.definition) rescue => e logger.error "Error converting definition yaml to json: #{e.message}" raise ArgumentError, "Error converting definition yaml to json: #{e.message}" @@ -77,11 +77,21 @@ class WorkUnitsController < ApplicationController attrs['cwd'] = "/var/spool/cwl" attrs['output_path'] = "/var/spool/cwl" + input_defaults = {} + if wf_json + inputs = get_cwl_inputs(wf_json) + inputs.each do |input| + if input[:default] + input_defaults[cwl_shortname(input[:id])] = input[:default] + end + end + end + # mounts mounts = { "/var/lib/cwl/cwl.input.json" => { "kind" => "json", - "content" => {} + "content" => input_defaults }, "stdout" => { "kind" => "file",