X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/e661ffb13884990e8c359fc4ed973db1d7f95db9..1b8120689041941db937883c3132a9c6819b56c5:/sdk/cli/bin/arv-run-pipeline-instance diff --git a/sdk/cli/bin/arv-run-pipeline-instance b/sdk/cli/bin/arv-run-pipeline-instance index 7ddea30cf7..60d5c38cf9 100755 --- a/sdk/cli/bin/arv-run-pipeline-instance +++ b/sdk/cli/bin/arv-run-pipeline-instance @@ -312,19 +312,19 @@ class JobCache [] end end - def self.create(attributes) + def self.create(job, create_params) @cache ||= {} result = $client.execute(:api_method => $arvados.jobs.create, :parameters => { :api_token => ENV['ARVADOS_API_TOKEN'], - :job => attributes.to_json - }, + :job => job.to_json + }.merge(create_params), :authenticated => false) j = JSON.parse result.body, :symbolize_names => true if j.is_a? Hash and j[:uuid] @cache[j[:uuid]] = j else - debuglog "create job: #{j[:errors] rescue nil} with attribute #{attributes}", 0 + debuglog "create job: #{j[:errors] rescue nil} with attributes #{job}", 0 nil end end @@ -416,12 +416,14 @@ class WhRunPipelineInstance @instance ||= PipelineInstance. create(:components => @components, :pipeline_template_uuid => @template[:uuid], - :active => true) + :state => 'RunningOnClient') self end def run moretodo = true + interrupted = false + while moretodo moretodo = false @components.each do |cname, c| @@ -437,15 +439,27 @@ class WhRunPipelineInstance # No job yet associated with this component and is component inputs # are fully specified (any output_of script_parameters are resolved # to real value) - job = JobCache.create({:script => c[:script], - :script_parameters => c[:script_parameters], - :script_version => c[:script_version], - :repository => c[:repository], - :minimum_script_version => c[:minimum_script_version], - :exclude_script_versions => c[:exclude_minimum_script_versions], - :nondeterministic => c[:nondeterministic], - :no_reuse => @options[:no_reuse], - :output_is_persistent => c[:output_is_persistent] || false}) + job = JobCache.create({ + :script => c[:script], + :script_parameters => c[:script_parameters], + :script_version => c[:script_version], + :repository => c[:repository], + :nondeterministic => c[:nondeterministic], + :output_is_persistent => c[:output_is_persistent] || false, + # TODO: Delete the following three attributes when + # supporting pre-20140418 API servers is no longer + # important. New API servers take these as flags that + # control behavior of create, rather than job attributes. + :minimum_script_version => c[:minimum_script_version], + :exclude_script_versions => c[:exclude_minimum_script_versions], + :no_reuse => @options[:no_reuse] || c[:nondeterministic], + }, { + # This is the right place to put these attributes when + # dealing with new API servers. + :minimum_script_version => c[:minimum_script_version], + :exclude_script_versions => c[:exclude_minimum_script_versions], + :find_or_create => !(@options[:no_reuse] || c[:nondeterministic]), + }) if job debuglog "component #{cname} new job #{job[:uuid]}" c[:job] = job @@ -532,7 +546,9 @@ class WhRunPipelineInstance sleep 10 rescue Interrupt debuglog "interrupt", 0 - abort + interrupted = true + break + #abort end end end @@ -553,11 +569,30 @@ class WhRunPipelineInstance end end - if ended == @components.length or failed > 0 - @instance[:active] = false - @instance[:success] = (succeeded == @components.length) + success = (succeeded == @components.length) + + if interrupted + if success + @instance[:active] = false + @instance[:success] = success + @instance[:state] = "Complete" + else + @instance[:active] = nil + @instance[:success] = nil + @instance[:state] = 'Paused' + end + else + if ended == @components.length or failed > 0 + @instance[:active] = false + @instance[:success] = success + @instance[:state] = success ? "Complete" : "Failed" + end end + # set components_summary + components_summary = {"todo" => @components.length - ended, "done" => succeeded, "failed" => failed} + @instance[:components_summary] = components_summary + @instance.save end