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-layout: default
-navsection: installguide
-title: Install Workbench
-...
-
-This installation guide assumes you are on a 64 bit Debian or Ubuntu system.
-
-h2. Install prerequisites
-
-
-~$ sudo apt-get install \
- bison build-essential gettext libcurl3 libcurl3-gnutls \
- libcurl4-openssl-dev libpcre3-dev libpq-dev libreadline-dev \
- libssl-dev libxslt1.1 sudo wget zlib1g-dev graphviz
-
-
-Also make sure you have "Ruby and bundler":install-manual-prerequisites-ruby.html installed.
-
-Workbench doesn't need its own database, so it does not need to have PostgreSQL installed.
-
-h2. Download the source tree
-
-
-~$ cd $HOME # (or wherever you want to install)
-~$ git clone https://github.com/curoverse/arvados.git
-
-
-See also: "Downloading the source code":https://arvados.org/projects/arvados/wiki/Download on the Arvados wiki.
-
-The Workbench application is in @apps/workbench@ in the source tree.
-
-h2. Install gem dependencies
-
-
-~$ cd arvados/apps/workbench
-~/arvados/apps/workbench$ bundle install
-
-
-
-Alternatively, if you don't have sudo/root privileges on the host, install the gems in your own directory instead of installing them system-wide:
-
-
-~$ cd arvados/apps/workbench
-~/arvados/apps/workbench$ bundle install --path=vendor/bundle
-
-
-The @bundle install@ command might produce a warning about the themes_for_rails gem. This is OK:
-
-
-themes_for_rails at /home/you/.rvm/gems/ruby-2.1.1/bundler/gems/themes_for_rails-1fd2d7897d75 did not have a valid gemspec.
-This prevents bundler from installing bins or native extensions, but that may not affect its functionality.
-The validation message from Rubygems was:
- duplicate dependency on rails (= 3.0.11, development), (>= 3.0.0) use:
- add_runtime_dependency 'rails', '= 3.0.11', '>= 3.0.0'
-Using themes_for_rails (0.5.1) from https://github.com/holtkampw/themes_for_rails (at 1fd2d78)
-
-
-h2. Choose your environment
-
-The Workbench application can be run in @development@ or in @production@ mode. Unless this installation is going to be used for development on the Workbench applicatoin itself, you should run it in @production@ mode.
-
-Copy the example environment file for your environment. For example, if you choose @production@:
-
-
-~/arvados/apps/workbench$ cp -i config/environments/production.rb.example config/environments/production.rb
-
-
-h2. Configure the Workbench application
-
-First, copy the example configuration file:
-
-
-~/arvados/apps/workbench$ cp -i config/application.yml.example config/application.yml
-
-
-The Workbench application reads the @config/application.yml@ file, as well as the @config/application.defaults.yml@ file. Values in @config/application.yml@ take precedence over the defaults that are defined in @config/application.defaults.yml@. The @config/application.yml.example@ file is not read by the Workbench application and is provided for installation convenience, only.
-
-Consult @config/application.default.yml@ for a full list of configuration options. Always put your local configuration in @config/application.yml@, never edit @config/application.default.yml@.
-
-h3. secret_token
-
-This application needs a secret token. Generate a new secret:
-
-
-~/arvados/apps/workbench$ rake secret
-aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
-
-
-
-Then put that value in the @secret_token@ field.
-
-h3. arvados_login_base and arvados_v1_base
-
-Point @arvados_login_base@ and @arvados_v1_base@ at your "API server":install-api-server.html. For example like this:
-
-
-arvados_login_base: https://prefix_uuid.your.domain/login
-arvados_v1_base: https://prefix_uuid.your.domain/arvados/v1
-
-
-
-h3. site_name
-
-@site_name@ can be set to any arbitrary string. It is used to identify this Workbench to people visiting it.
-
-h3. arvados_insecure_https
-
-If the SSL certificate you use for your API server isn't an official certificate signed by a CA, make sure @arvados_insecure_https@ is @true@.
-
-h3. other options
-
-Consult @application.default.yml@ for a full list of configuration options. Always put your local configuration in @application.yml@ instead of editing @application.default.yml@.
-
-Copy @config/piwik.yml.example@ to @config/piwik.yml@ and edit to suit.
-
-h2. Start the Workbench application
-
-h3. Development environment
-
-If you plan to run in development mode, you can now run the development server this way:
-
-
-~/arvados/apps/workbench$ bundle exec rails server --port=3031
-
-
-h3. Production environment
-
-We recommend "Passenger":https://www.phusionpassenger.com/ to run the API server in production.
-
-Point it to the apps/workbench directory in the source tree.
-
-h2. Trusted client setting
-
-Log in to Workbench once to ensure that the Arvados API server has a record of the Workbench client. (It's OK if Workbench says your account hasn't been activated yet. We'll deal with that next.)
-
-In the API server project root, start the rails console. Locate the ApiClient record for your Workbench installation (typically, while you're setting this up, the @last@ one in the database is the one you want), then set the @is_trusted@ flag for the appropriate client record:
-
-~/arvados/services/api$ RAILS_ENV=production bundle exec rails console
-irb(main):001:0> wb = ApiClient.all.last; [wb.url_prefix, wb.created_at]
-=> ["https://workbench.example.com/", Sat, 19 Apr 2014 03:35:12 UTC +00:00]
-irb(main):002:0> include CurrentApiClient
-=> true
-irb(main):003:0> act_as_system_user do wb.update_attributes!(is_trusted: true) end
-=> true
-
-
-
-h2(#admin-user). Add an admin user
-
-Next, we're going to use the rails console on the API server to activate our own account and give yourself admin privileges:
-
-
-~/arvados/services/api$ RAILS_ENV=production bundle exec rails console
-irb(main):001:0> Thread.current[:user] = User.all.select(&:identity_url).last
-irb(main):002:0> Thread.current[:user].is_admin = true
-irb(main):003:0> Thread.current[:user].update_attributes is_admin: true, is_active: true
-irb(main):004:0> User.where(is_admin: true).collect &:email
-=> ["root", "your_address@example.com"]
-
-
-At this point, you should have a working Workbench login with administrator privileges. Revisit your Workbench URL in a browser and reload the page to access it.