X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/e28233a15116ea3c0c86d0216c686215eb2ef6c7..3325e3c0aca3dcf51dfc72b63c7d077c6b6e5017:/lib/install/deps.go

diff --git a/lib/install/deps.go b/lib/install/deps.go
index 069ffd0a2b..11ce0f188f 100644
--- a/lib/install/deps.go
+++ b/lib/install/deps.go
@@ -34,13 +34,13 @@ const goversion = "1.17.7"
 const (
 	rubyversion             = "2.7.5"
 	bundlerversion          = "2.2.19"
-	singularityversion      = "3.7.4"
+	singularityversion      = "3.9.9"
 	pjsversion              = "1.9.8"
 	geckoversion            = "0.24.0"
 	gradleversion           = "5.3.1"
 	nodejsversion           = "v12.22.11"
 	devtestDatabasePassword = "insecure_arvados_test"
-	workbench2version       = "5e020488f67b5bc919796e0dc8b0b9f3b3ff23b0"
+	workbench2version       = "2454ac35292a79594c32a80430740317ed5005cf"
 )
 
 //go:embed arvados.service
@@ -138,7 +138,6 @@ func (inst *installCommand) RunCommand(prog string, args []string, stdin io.Read
 		pkgs = append(pkgs,
 			"dpkg-dev",
 			"eatmydata", // install it for later steps, even if we're not using it now
-			"rsync",
 		)
 	}
 
@@ -185,6 +184,7 @@ func (inst *installCommand) RunCommand(prog string, args []string, stdin io.Read
 			"r-cran-markdown",
 			"r-cran-roxygen2",
 			"r-cran-xml",
+			"rsync",
 			"sudo",
 			"uuid-dev",
 			"wget",
@@ -199,10 +199,13 @@ func (inst *installCommand) RunCommand(prog string, args []string, stdin io.Read
 		}
 		if dev || test {
 			pkgs = append(pkgs, "squashfs-tools") // for singularity
+			pkgs = append(pkgs, "gnupg")          // for docker install recipe
 		}
 		switch {
-		case osv.Debian && osv.Major >= 10:
+		case osv.Debian && osv.Major >= 11:
 			pkgs = append(pkgs, "libcurl4", "perl-modules-5.32")
+		case osv.Debian && osv.Major >= 10:
+			pkgs = append(pkgs, "libcurl4", "perl-modules")
 		default:
 			pkgs = append(pkgs, "libcurl3", "perl-modules")
 		}
@@ -221,6 +224,37 @@ func (inst *installCommand) RunCommand(prog string, args []string, stdin io.Read
 		}
 	}
 
+	if dev || test {
+		if havedockerversion, err := exec.Command("docker", "--version").CombinedOutput(); err == nil {
+			logger.Printf("%s installed, assuming that version is ok", bytes.TrimSuffix(havedockerversion, []byte("\n")))
+		} else if osv.Debian {
+			var codename string
+			switch osv.Major {
+			case 10:
+				codename = "buster"
+			case 11:
+				codename = "bullseye"
+			default:
+				err = fmt.Errorf("don't know how to install docker-ce for debian %d", osv.Major)
+				return 1
+			}
+			err = inst.runBash(`
+rm -f /usr/share/keyrings/docker-archive-keyring.gpg
+curl -fsSL https://download.docker.com/linux/debian/gpg | gpg --dearmor -o /usr/share/keyrings/docker-archive-keyring.gpg
+echo 'deb [arch=amd64 signed-by=/usr/share/keyrings/docker-archive-keyring.gpg] https://download.docker.com/linux/debian/ `+codename+` stable' | \
+    tee /etc/apt/sources.list.d/docker.list
+apt-get update
+DEBIAN_FRONTEND=noninteractive apt-get --yes --no-install-recommends install docker-ce
+`, stdout, stderr)
+			if err != nil {
+				return 1
+			}
+		} else {
+			err = fmt.Errorf("don't know how to install docker for osversion %v", osv)
+			return 1
+		}
+	}
+
 	os.Mkdir("/var/lib/arvados", 0755)
 	os.Mkdir("/var/lib/arvados/tmp", 0700)
 	if prod || pkg {
@@ -336,6 +370,14 @@ make -C ./builddir install
 			}
 		}
 
+		err = inst.runBash(`
+install /usr/bin/nsenter /var/lib/arvados/bin/nsenter
+setcap "cap_sys_admin+pei cap_sys_chroot+pei" /var/lib/arvados/bin/nsenter
+`, stdout, stderr)
+		if err != nil {
+			return 1
+		}
+
 		// The entry in /etc/locale.gen is "en_US.UTF-8"; once
 		// it's installed, locale -a reports it as
 		// "en_US.utf8".
@@ -521,15 +563,6 @@ yarn install
 		for _, srcdir := range []string{
 			"cmd/arvados-client",
 			"cmd/arvados-server",
-			"services/arv-git-httpd",
-			"services/crunch-dispatch-local",
-			"services/crunch-dispatch-slurm",
-			"services/health",
-			"services/keep-balance",
-			"services/keep-web",
-			"services/keepproxy",
-			"services/keepstore",
-			"services/ws",
 		} {
 			fmt.Fprintf(stderr, "building %s...\n", srcdir)
 			cmd := exec.Command("go", "install", "-ldflags", "-X git.arvados.org/arvados.git/lib/cmd.version="+inst.PackageVersion+" -X main.version="+inst.PackageVersion+" -s -w")
@@ -544,19 +577,6 @@ yarn install
 			}
 		}
 
-		// Symlink user-facing Go programs /usr/bin/x ->
-		// /var/lib/arvados/bin/x
-		for _, prog := range []string{"arvados-client", "arvados-server"} {
-			err = os.Remove("/usr/bin/" + prog)
-			if err != nil && !errors.Is(err, os.ErrNotExist) {
-				return 1
-			}
-			err = os.Symlink("/var/lib/arvados/bin/"+prog, "/usr/bin/"+prog)
-			if err != nil {
-				return 1
-			}
-		}
-
 		// Copy assets from source tree to /var/lib/arvados/share
 		cmd := exec.Command("install", "-v", "-t", "/var/lib/arvados/share", filepath.Join(inst.SourcePath, "sdk/python/tests/nginx.conf"))
 		cmd.Stdout = stdout
@@ -576,7 +596,9 @@ yarn install
 				"-a", "--no-owner", "--no-group", "--delete-after", "--delete-excluded",
 				"--exclude", "/coverage",
 				"--exclude", "/log",
+				"--exclude", "/node_modules",
 				"--exclude", "/tmp",
+				"--exclude", "/public/assets",
 				"--exclude", "/vendor",
 				"--exclude", "/config/environments",
 				"./", "/var/lib/arvados/"+dstdir+"/")
@@ -588,14 +610,28 @@ yarn install
 				return 1
 			}
 			for _, cmdline := range [][]string{
-				{"mkdir", "-p", "log", "tmp", ".bundle", "/var/www/.gem", "/var/www/.bundle", "/var/www/.passenger"},
+				{"mkdir", "-p", "log", "public/assets", "tmp", "vendor", ".bundle", "/var/www/.bundle", "/var/www/.gem", "/var/www/.npm", "/var/www/.passenger"},
 				{"touch", "log/production.log"},
-				{"chown", "-R", "--from=root", "www-data:www-data", "/var/www/.gem", "/var/www/.bundle", "/var/www/.passenger", "log", "tmp", ".bundle", "Gemfile.lock", "config.ru", "config/environment.rb"},
+				{"chown", "-R", "--from=root", "www-data:www-data", "/var/www/.bundle", "/var/www/.gem", "/var/www/.npm", "/var/www/.passenger", "log", "tmp", "vendor", ".bundle", "Gemfile.lock", "config.ru", "config/environment.rb"},
 				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/gem", "install", "--user", "--conservative", "--no-document", "bundler:" + bundlerversion},
-				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "install", "--deployment", "--jobs", "8", "--path", "/var/www/.gem", "--without", "development test diagnostics performance"},
+				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "config", "set", "--local", "deployment", "true"},
+				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "config", "set", "--local", "path", "/var/www/.gem"},
+				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "config", "set", "--local", "without", "development test diagnostics performance"},
+				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "install", "--jobs", "8"},
+
+				{"chown", "www-data:www-data", ".", "public/assets"},
+				// {"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "config", "set", "--local", "system", "true"},
+				{"sudo", "-u", "www-data", "ARVADOS_CONFIG=none", "RAILS_GROUPS=assets", "RAILS_ENV=production", "/var/lib/arvados/bin/bundle", "exec", "rake", "npm:install"},
+				{"sudo", "-u", "www-data", "ARVADOS_CONFIG=none", "RAILS_GROUPS=assets", "RAILS_ENV=production", "/var/lib/arvados/bin/bundle", "exec", "rake", "assets:precompile"},
+				{"chown", "root:root", "."},
+				{"chown", "-R", "root:root", "public/assets", "vendor"},
+
 				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "exec", "passenger-config", "build-native-support"},
 				{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "exec", "passenger-config", "install-standalone-runtime"},
 			} {
+				if cmdline[len(cmdline)-2] == "rake" && dstdir != "workbench1" {
+					continue
+				}
 				cmd = exec.Command(cmdline[0], cmdline[1:]...)
 				cmd.Dir = "/var/lib/arvados/" + dstdir
 				cmd.Stdout = stdout
@@ -629,6 +665,14 @@ rsync -a --delete-after build/ /var/lib/arvados/workbench2/
 			return 1
 		}
 
+		// Install arvados-cli gem (binaries go in
+		// /var/lib/arvados/bin)
+		if err = inst.runBash(`
+/var/lib/arvados/bin/gem install --conservative --no-document arvados-cli
+`, stdout, stderr); err != nil {
+			return 1
+		}
+
 		err = os.WriteFile("/lib/systemd/system/arvados.service", arvadosServiceFile, 0777)
 		if err != nil {
 			return 1
@@ -645,6 +689,19 @@ rsync -a --delete-after build/ /var/lib/arvados/workbench2/
 		if err != nil {
 			return 1
 		}
+
+		// Symlink user-facing programs /usr/bin/x ->
+		// /var/lib/arvados/bin/x
+		for _, prog := range []string{"arvados-client", "arvados-server", "arv", "arv-tag"} {
+			err = os.Remove("/usr/bin/" + prog)
+			if err != nil && !errors.Is(err, os.ErrNotExist) {
+				return 1
+			}
+			err = os.Symlink("/var/lib/arvados/bin/"+prog, "/usr/bin/"+prog)
+			if err != nil {
+				return 1
+			}
+		}
 	}
 
 	return 0