X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/df591042778408d03d410d5c22a669d85652d1ea..90bb5de474c45e0b786f387ecab2277b593e335d:/sdk/cwl/tests/arvados-tests.yml diff --git a/sdk/cwl/tests/arvados-tests.yml b/sdk/cwl/tests/arvados-tests.yml index ea6477cfe8..8b8ff28c78 100644 --- a/sdk/cwl/tests/arvados-tests.yml +++ b/sdk/cwl/tests/arvados-tests.yml @@ -102,8 +102,8 @@ "size": 32 }, { - "checksum": "sha1$83483b9c65d99967aecc794c14f9f4743314d186", - "location": "sample2_S01_R3_001.fastq.txt", + "checksum": "sha1$5f3b4df1b0f7fdced751fc6079778600ad9fdb45", + "location": "sample2_S01_R1_001.fastq.txt", "class": "File", "size": 32 } @@ -118,6 +118,12 @@ tool: 12418-glob-empty-collection.cwl doc: "Test glob output on empty collection" +- job: null + output: + out: null + tool: 13976-keepref-wf.cwl + doc: "Test issue 13976" + - job: null output: out: out @@ -146,3 +152,94 @@ } tool: wf/secret_wf.cwl doc: "Test secret input parameters" + tags: [ secrets ] + +- job: null + output: + out: null + tool: wf/runin-reqs-wf.cwl + doc: "RunInSingleContainer handles dynamic resource requests on step" + +- job: null + output: + out: null + tool: wf/runin-reqs-wf2.cwl + doc: "RunInSingleContainer handles dynamic resource requests on embedded subworkflow" + +- job: null + output: + out: null + tool: wf/runin-reqs-wf3.cwl + should_fail: true + doc: "RunInSingleContainer disallows dynamic resource request on subworkflow steps" + +- job: null + output: + out: null + tool: wf/runin-reqs-wf4.cwl + doc: "RunInSingleContainer discovers static resource request in subworkflow steps" + +- job: secondaryFiles/inp3.yml + output: {} + tool: secondaryFiles/example1.cwl + doc: Discover secondaryFiles at runtime if they are in keep + +- job: null + output: {} + tool: secondaryFiles/example3.cwl + doc: Discover secondaryFiles on default values + +- job: null + output: + out: null + tool: wf-defaults/wf1.cwl + doc: "Can have separate default parameters including directory and file inside same directory" + +- job: null + output: + out: null + tool: wf-defaults/wf2.cwl + doc: "Can have a parameter default value that is a directory literal with a file literal" + +- job: null + output: + out: null + tool: wf-defaults/wf3.cwl + doc: "Do not accept a directory literal without a basename" + should_fail: true + +- job: null + output: + out: null + tool: wf-defaults/wf4.cwl + doc: default in embedded subworkflow missing 'id' field + should_fail: true + +- job: null + output: + out: null + tool: wf-defaults/wf5.cwl + doc: default in embedded subworkflow + +- job: null + output: + out: null + tool: wf-defaults/wf6.cwl + doc: default in RunInSingleContainer step + +- job: null + output: + out: null + tool: wf-defaults/wf7.cwl + doc: workflow level default in RunInSingleContainer + +- job: 13931-size-job.yml + output: + "out": { + "checksum": "sha1$5bf6e5357bd42a6b1d2a3a040e16a91490064d26", + "location": "size.txt", + "class": "File", + "size": 3 + } + tool: 13931-size.cwl + doc: Test that size is set for files in Keep